RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 PIWIL1Q96J94 861 aaKnown RBP12.18□□□□□ -0.46
SCAF11-201ENST00000266589 DDX43Q9NXZ2 648 aaKnown RBP12.18□□□□□ -0.46
SCAF11-201ENST00000266589 FSCN2O14926 492 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 RARAP10276 462 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 CCL5P13501 91 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 TKTP29401 623 aaKnown RBP12.17□□□□□ -0.46
SCAF11-201ENST00000266589 CHRNA3P32297 505 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 DR1Q01658 176 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 TUSC3Q13454 348 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 BFSP2Q13515 415 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 SMC1AQ14683 1233 aaKnown RBP12.17□□□□□ -0.46
SCAF11-201ENST00000266589 SIX1Q15475 284 aaPredicted RBP12.17□□□□□ -0.46
SCAF11-201ENST00000266589 CCDC142Q17RM4 750 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 ATP13A4Q4VNC1 1196 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 PAN2Q504Q3 1202 aaKnown RBP12.17□□□□□ -0.46
SCAF11-201ENST00000266589 ZFYVE27Q5T4F4 411 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 LRRC38Q5VT99 294 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 HDXQ7Z353 690 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 TMEM110Q86TL2 294 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 EXD1Q8NHP7 514 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 STK32AQ8WU08 396 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 CASKIN2Q8WXE0 1202 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 IFT81Q8WYA0 676 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 RNF208Q9H0X6 261 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 TIMM13Q9Y5L4 95 aaPredicted RBP12.17□□□□□ -0.46
SCAF11-201ENST00000266589 GRAP2O75791 330 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 B3GAT3O94766 335 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 KRT1P04264 644 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 PTPN1P18031 435 aaKnown RBP12.17□□□□□ -0.46
SCAF11-201ENST00000266589 TNNT3P45378 269 aaPredicted RBP12.17□□□□□ -0.46
SCAF11-201ENST00000266589 LHX1P48742 406 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 AARSP49588 968 aaKnown RBP eCLIP12.17□□□□□ -0.46
SCAF11-201ENST00000266589 CARSP49589 748 aaKnown RBP12.17□□□□□ -0.46
SCAF11-201ENST00000266589 SNX16P57768 344 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 CYP1B1Q16678 543 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 KCTD19Q17RG1 926 aaPredicted RBP12.17□□□□□ -0.46
SCAF11-201ENST00000266589 TIGD5Q53EQ6 642 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 TXNRD3NBQ6F5E7 133 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 OLFML1Q6UWY5 402 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 AENQ8WTP8 325 aaKnown RBP12.17□□□□□ -0.46
SCAF11-201ENST00000266589 MAGOHBQ96A72 148 aaKnown RBP12.17□□□□□ -0.46
SCAF11-201ENST00000266589 RNF25Q96BH1 459 aaPredicted RBP12.17□□□□□ -0.46
SCAF11-201ENST00000266589 GDAP1L1Q96MZ0 367 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 HERPUD2Q9BSE4 406 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.17□□□□□ -0.46
SCAF11-201ENST00000266589 OGDHLQ9ULD0 1010 aa12.17□□□□□ -0.46
SCAF11-201ENST00000266589 CEP350Q5VT06 3117 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 PI4K2BG5E9Z4 385 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 I3L4J1 428 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 INPPL1O15357 1258 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 PAPSS1O43252 624 aaPredicted RBP12.16□□□□□ -0.46
SCAF11-201ENST00000266589 NBNO60934 754 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 LRCH4O75427 683 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 GABBR2O75899 941 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 EOMESO95936 686 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 RALAP11233 206 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 ODC1P11926 461 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 GPD1P21695 349 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 ZNF143P52747 638 aaPredicted RBP12.16□□□□□ -0.46
SCAF11-201ENST00000266589 EPHB4P54760 987 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 SLC6A3Q01959 620 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 SLC25A11Q02978 314 aaKnown RBP12.16□□□□□ -0.46
SCAF11-201ENST00000266589 DHX34Q14147 1143 aaKnown RBP12.16□□□□□ -0.46
SCAF11-201ENST00000266589 CASP8Q14790 479 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 TRADDQ15628 312 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 MDH1BQ5I0G3 518 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 KIAA0319Q5VV43 1072 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 TTC27Q6P3X3 843 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 GLB1LQ6UWU2 654 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 SCUBE3Q8IX30 993 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 FUKQ8N0W3 1084 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 ARFGAP1Q8N6T3 406 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 HASPINQ8TF76 798 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 MAIP1Q8WWC4 291 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 RBM41Q96IZ5 413 aaKnown RBP12.16□□□□□ -0.46
SCAF11-201ENST00000266589 UROC1Q96N76 676 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 HNRNPABQ99729 332 aaKnown RBP12.16□□□□□ -0.46
SCAF11-201ENST00000266589 TRIM51Q9BSJ1 452 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 HEMGNQ9BXL5 484 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 FTHL17Q9BXU8 183 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 OSBPL8Q9BZF1 889 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 NFU1Q9UMS0 254 aa12.16□□□□□ -0.46
SCAF11-201ENST00000266589 C2CD4BA6NLJ0 364 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 SPDYE4A6NLX3 237 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 CLDN5O00501 218 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 MAP2K7O14733 419 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 RRP9O43818 475 aaKnown RBP12.15□□□□□ -0.46
SCAF11-201ENST00000266589 PQBP1O60828 265 aaKnown RBP12.15□□□□□ -0.46
SCAF11-201ENST00000266589 RNF8O76064 485 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 FLT3P36888 993 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 CETN2P41208 172 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 ACAP1Q15027 740 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 ODF2Q5BJF6 829 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 TRNP1Q6NT89 227 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 CCDC137Q6PK04 289 aaKnown RBP12.15□□□□□ -0.46
SCAF11-201ENST00000266589 POLNQ7Z5Q5 900 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 ANKS1BQ7Z6G8 1248 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 RCOR2Q8IZ40 523 aa12.15□□□□□ -0.46
SCAF11-201ENST00000266589 C12orf50Q8NA57 414 aaPredicted RBP12.15□□□□□ -0.46
SCAF11-201ENST00000266589 RXFP2Q8WXD0 754 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms