RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 EPN3Q9H201 632 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 XAB2Q9HCS7 855 aaKnown RBP16.06■□□□□ 0.16
TIMP3-201ENST00000266085 ARL2BPQ9Y2Y0 163 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 PDE4DIPQ5VU43 2346 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 SLC2A3P11169 496 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 IPMKQ8NFU5 416 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 BMP6P22004 513 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 GCNT1Q02742 428 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 CTXN3Q4LDR2 81 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 ARHGEF19Q8IW93 802 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 RIBC1Q8N443 379 aaPredicted RBP16.05■□□□□ 0.16
TIMP3-201ENST00000266085 FAM172AQ8WUF8 416 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 PABPC3Q9H361 631 aaKnown RBP16.05■□□□□ 0.16
TIMP3-201ENST00000266085 SLC30A1Q9Y6M5 507 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 MYPNQ86TC9 1320 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 GCKP35557 465 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 CDH8P55286 799 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 INHBEP58166 350 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 MCL1Q07820 350 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 PRAMEF19Q5SWL8 479 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 FAXCQ5TGI0 409 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 ACTRT1Q8TDG2 376 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 BHMTQ93088 406 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 GPATCH2LQ9NWQ4 482 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 ARHGEF38Q9NXL2 777 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 ITGA11Q9UKX5 1188 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 IFT172Q9UG01 1749 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 TMEM120BA0PK00 339 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 HOXA2O43364 376 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 ESRRGP62508 458 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 ARHGAP18Q8N392 663 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 SHCBP1Q8NEM2 672 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 MTMR8Q96EF0 704 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 RPRD1AQ96P16 312 aaPredicted RBP16.05■□□□□ 0.16
TIMP3-201ENST00000266085 XPO6Q96QU8 1125 aaKnown RBP16.05■□□□□ 0.16
TIMP3-201ENST00000266085 PNKPQ96T60 521 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 HSD17B14Q9BPX1 270 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 TRIM15Q9C019 465 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 MRPL40Q9NQ50 206 aaKnown RBP16.05■□□□□ 0.16
TIMP3-201ENST00000266085 IRAK4Q9NWZ3 460 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 STOML1Q9UBI4 398 aa16.05■□□□□ 0.16
TIMP3-201ENST00000266085 KLRC4O43908 158 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 RFC1P35251 1148 aaPredicted RBP16.04■□□□□ 0.16
TIMP3-201ENST00000266085 NDST1P52848 882 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 CBWD6Q4V339 395 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 CBWD3Q5JTY5 395 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 CBWD5Q5RIA9 395 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 GJC2Q5T442 439 aaPredicted RBP16.04■□□□□ 0.16
TIMP3-201ENST00000266085 CXCL17Q6UXB2 119 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 DEFB128Q7Z7B8 93 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 TFB1MQ8WVM0 346 aaKnown RBP16.04■□□□□ 0.16
TIMP3-201ENST00000266085 RXFP2Q8WXD0 754 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 ZNF669Q96BR6 464 aaPredicted RBP16.04■□□□□ 0.16
TIMP3-201ENST00000266085 AAASQ9NRG9 546 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 AFF4Q9UHB7 1163 aaKnown RBP16.04■□□□□ 0.16
TIMP3-201ENST00000266085 DMGDHQ9UI17 866 aaKnown RBP16.04■□□□□ 0.16
TIMP3-201ENST00000266085 EIF3HO15372 352 aaKnown RBP eCLIP16.04■□□□□ 0.169e-26■□□□□ 9.3
TIMP3-201ENST00000266085 LHX1P48742 406 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 CTCFP49711 727 aaPredicted RBP16.04■□□□□ 0.16
TIMP3-201ENST00000266085 STX3Q13277 289 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 ETNPPLQ8TBG4 499 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 CALML6Q8TD86 181 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 FBXO32Q969P5 355 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 TSPAN17Q96FV3 270 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 CCDC138Q96M89 665 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 TSSK1BQ9BXA7 367 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 C20orf96Q9NUD7 363 aaPredicted RBP16.04■□□□□ 0.16
TIMP3-201ENST00000266085 BARX2Q9UMQ3 279 aaPredicted RBP16.04■□□□□ 0.16
TIMP3-201ENST00000266085 NDUFS3O75489 264 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 HSD17B3P37058 310 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 MAP3K7CLP57077 242 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 ST8SIA6P61647 398 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 TWF1Q12792 350 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 PDK2Q15119 407 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 PPP1R13LQ8WUF5 828 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 FRMD8P1Q9BZ68 369 aaPredicted RBP16.04■□□□□ 0.16
TIMP3-201ENST00000266085 KRT82Q9NSB4 513 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 PCMTD2Q9NV79 361 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 ATP11BQ9Y2G3 1177 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 LACTBL1A8MY62 500 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 TLR2O60603 784 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 SNHG28P0DPA3 235 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 EFTUD2Q15029 972 aaKnown RBP eCLIP16.04■□□□□ 0.16
TIMP3-201ENST00000266085 NFE2Q16621 373 aaPredicted RBP16.04■□□□□ 0.16
TIMP3-201ENST00000266085 CLEC16AQ2KHT3 1053 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 ZNF410Q86VK4 478 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 KLF6Q99612 283 aaPredicted RBP16.04■□□□□ 0.16
TIMP3-201ENST00000266085 SCOCQ9UIL1 159 aa16.04■□□□□ 0.16
TIMP3-201ENST00000266085 LRRIQ3A6PVS8 624 aaPredicted RBP16.03■□□□□ 0.16
TIMP3-201ENST00000266085 PQBP1O60828 265 aaKnown RBP16.03■□□□□ 0.16
TIMP3-201ENST00000266085 ACAT1P24752 427 aaKnown RBP16.03■□□□□ 0.16
TIMP3-201ENST00000266085 ETFBP38117 255 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 C1QBPQ07021 282 aaKnown RBP16.03■□□□□ 0.16
TIMP3-201ENST00000266085 MDH1BQ5I0G3 518 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 MEI1Q5TIA1 1274 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 DDIASQ8IXT1 998 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 EXD1Q8NHP7 514 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 CASKIN2Q8WXE0 1202 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 NCLNQ969V3 563 aa16.03■□□□□ 0.16
TIMP3-201ENST00000266085 FAM161BQ96MY7 647 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms