RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 TRAPPC3O43617 180 aa18.67■□□□□ 0.58
COL5A3-201ENST00000264828 PMPCBO75439 489 aa18.67■□□□□ 0.58
COL5A3-201ENST00000264828 MLNP12872 115 aa18.67■□□□□ 0.58
COL5A3-201ENST00000264828 LAMB3Q13751 1172 aa18.67■□□□□ 0.58
COL5A3-201ENST00000264828 WWOXQ9NZC7 414 aa18.67■□□□□ 0.58
COL5A3-201ENST00000264828 TSC22D2O75157 780 aa18.67■□□□□ 0.58
COL5A3-201ENST00000264828 EDRF1Q3B7T1 1238 aa18.67■□□□□ 0.58
COL5A3-201ENST00000264828 SEZ6Q53EL9 994 aa18.67■□□□□ 0.58
COL5A3-201ENST00000264828 NLRP9Q7RTR0 991 aa18.67■□□□□ 0.58
COL5A3-201ENST00000264828 FAM129AQ9BZQ8 928 aa18.67■□□□□ 0.58
COL5A3-201ENST00000264828 FOXP3Q9BZS1 431 aa18.67■□□□□ 0.58
COL5A3-201ENST00000264828 TRIM25Q14258 630 aaKnown RBP18.67■□□□□ 0.58
COL5A3-201ENST00000264828 BNIPLQ7Z465 357 aa18.67■□□□□ 0.58
COL5A3-201ENST00000264828 CHSY1Q86X52 802 aa18.67■□□□□ 0.58
COL5A3-201ENST00000264828 FBXO36Q8NEA4 188 aa18.67■□□□□ 0.58
COL5A3-201ENST00000264828 IMPAD1Q9NX62 359 aa18.67■□□□□ 0.58
COL5A3-201ENST00000264828 SGPL1O95470 568 aa18.67■□□□□ 0.58
COL5A3-201ENST00000264828 ARL4DP49703 201 aa18.67■□□□□ 0.58
COL5A3-201ENST00000264828 KCNV1Q6PIU1 500 aa18.67■□□□□ 0.58
COL5A3-201ENST00000264828 ZBTB10Q96DT7 871 aa18.67■□□□□ 0.58
COL5A3-201ENST00000264828 ZNRF3Q9ULT6 936 aa18.67■□□□□ 0.58
COL5A3-201ENST00000264828 SNX13Q9Y5W8 968 aa18.67■□□□□ 0.58
COL5A3-201ENST00000264828 TOMM70O94826 608 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 ACADSP16219 412 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 GLRBP48167 497 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 ERVK-24P63145 666 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 SLC44A4Q53GD3 710 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 SLC13A5Q86YT5 568 aaPredicted RBP18.66■□□□□ 0.58
COL5A3-201ENST00000264828 BHMTQ93088 406 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 EIF3DO15371 548 aaKnown RBP eCLIP18.66■□□□□ 0.58
COL5A3-201ENST00000264828 DYNC1LI2O43237 492 aaPredicted RBP18.66■□□□□ 0.58
COL5A3-201ENST00000264828 STRNO43815 780 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 IL18RAPO95256 599 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 TGM2P21980 687 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 DDHD1Q8NEL9 900 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 FAM136AQ96C01 138 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 SMARCAD1Q9H4L7 1026 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 LRRIQ1Q96JM4 1722 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 HEATR9A2RTY3 570 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 PDE5AO76074 875 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 SCTRP47872 440 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 HSPA13P48723 471 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 ANTXR2P58335 489 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 SV2CQ496J9 727 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 CHMP1BQ7LBR1 199 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 KIRREL3Q8IZU9 778 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 KCTD17Q8N5Z5 321 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 VPS33BQ9H267 617 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 RNF112Q9ULX5 631 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 LAMC2Q13753 1193 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 ACAD10Q6JQN1 1059 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 TUBGCP3Q96CW5 907 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 ILKAPQ9H0C8 392 aaPredicted RBP18.66■□□□□ 0.58
COL5A3-201ENST00000264828 PDP2Q9P2J9 529 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 SUPT7LO94864 414 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 NPTXRO95502 500 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 STRIP1Q5VSL9 837 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 FGD2Q7Z6J4 655 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 CENPLQ8N0S6 344 aaPredicted RBP18.66■□□□□ 0.58
COL5A3-201ENST00000264828 APPL1Q9UKG1 709 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 DUSP10Q9Y6W6 482 aa18.66■□□□□ 0.58
COL5A3-201ENST00000264828 LRRIQ3A6PVS8 624 aaPredicted RBP18.65■□□□□ 0.58
COL5A3-201ENST00000264828 ITGB3P05106 788 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 CLEC16AQ2KHT3 1053 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 EFCAB12Q6NXP0 572 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 PRRG1O14668 218 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 ACADSBP45954 432 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 KCNMA1Q12791 1236 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 FAM83EQ2M2I3 478 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 MAGEB18Q96M61 343 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 ZSWIM1Q9BR11 485 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 MPP6Q9NZW5 540 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 NAGPAQ9UK23 515 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 F8W810 466 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 RASSF9O75901 435 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 PYGMP11217 842 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 ITGA4P13612 1032 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 NAPEPLDQ6IQ20 393 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 BLOC1S5Q8TDH9 187 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 JADE3Q92613 823 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 KAT2BQ92831 832 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 NIF3L1Q9GZT8 377 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 CYP4F12Q9HCS2 524 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 PRR12Q9ULL5 1215 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 DIP2BQ9P265 1576 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 PTPRUQ92729 1446 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 DDX39BQ13838 428 aaKnown RBP18.65■□□□□ 0.58
COL5A3-201ENST00000264828 SNX17Q15036 470 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 SLC44A2Q8IWA5 706 aaPredicted RBP18.65■□□□□ 0.58
COL5A3-201ENST00000264828 SCUBE1Q8IWY4 988 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 REXO1L1PQ8IX06 675 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 SCAF8Q9UPN6 1271 aaKnown RBP18.65■□□□□ 0.58
COL5A3-201ENST00000264828 FRMPD1Q5SYB0 1578 aa18.65■□□□□ 0.58
COL5A3-201ENST00000264828 VWA5AO00534 786 aa18.64■□□□□ 0.58
COL5A3-201ENST00000264828 CD4P01730 458 aa18.64■□□□□ 0.58
COL5A3-201ENST00000264828 HOXD10P28358 340 aa18.64■□□□□ 0.58
COL5A3-201ENST00000264828 ITIH4Q14624 930 aa18.64■□□□□ 0.58
COL5A3-201ENST00000264828 HPDLQ96IR7 371 aa18.64■□□□□ 0.58
COL5A3-201ENST00000264828 KCND2Q9NZV8 630 aa18.64■□□□□ 0.58
COL5A3-201ENST00000264828 PSMC3P17980 439 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms