RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 MLXIPLQ9NP71 852 aa17.08■□□□□ 0.32
CTCF-201ENST00000264010 CCL15-CCL14A0A0B4J2E2 113 aa17.07■□□□□ 0.32
CTCF-201ENST00000264010 TMEM191CA6NGB0 347 aa17.07■□□□□ 0.32
CTCF-201ENST00000264010 MSCO60682 206 aa17.07■□□□□ 0.32
CTCF-201ENST00000264010 ACO1P21399 889 aaKnown RBP17.07■□□□□ 0.32
CTCF-201ENST00000264010 DEUP1Q05D60 604 aa17.07■□□□□ 0.32
CTCF-201ENST00000264010 TARBP2Q15633 366 aaKnown RBP17.07■□□□□ 0.32
CTCF-201ENST00000264010 CCL15Q16663 113 aa17.07■□□□□ 0.32
CTCF-201ENST00000264010 FYB2Q5VWT5 728 aa17.07■□□□□ 0.32
CTCF-201ENST00000264010 VPS52Q8N1B4 723 aa17.07■□□□□ 0.32
CTCF-201ENST00000264010 UBA3Q8TBC4 463 aa17.07■□□□□ 0.32
CTCF-201ENST00000264010 FRMD8P1Q9BZ68 369 aaPredicted RBP17.07■□□□□ 0.32
CTCF-201ENST00000264010 DPP3Q9NY33 737 aa17.07■□□□□ 0.32
CTCF-201ENST00000264010 KIAA1257Q9ULG3 409 aa17.07■□□□□ 0.32
CTCF-201ENST00000264010 TMEM120BA0PK00 339 aa17.07■□□□□ 0.32
CTCF-201ENST00000264010 B4GALT5O43286 388 aa17.07■□□□□ 0.32
CTCF-201ENST00000264010 B4GALT4O60513 344 aa17.07■□□□□ 0.32
CTCF-201ENST00000264010 LGALS2P05162 132 aa17.07■□□□□ 0.32
CTCF-201ENST00000264010 GJB1P08034 283 aa17.07■□□□□ 0.32
CTCF-201ENST00000264010 CDC42EP1Q00587 391 aa17.07■□□□□ 0.32
CTCF-201ENST00000264010 MAP7Q14244 749 aa17.07■□□□□ 0.32
CTCF-201ENST00000264010 DENND1BQ6P3S1 775 aa17.07■□□□□ 0.32
CTCF-201ENST00000264010 USP50Q70EL3 339 aaPredicted RBP17.07■□□□□ 0.32
CTCF-201ENST00000264010 CTAGE3PQ8IX95 158 aa17.07■□□□□ 0.32
CTCF-201ENST00000264010 LRRC8CQ8TDW0 803 aa17.07■□□□□ 0.32
CTCF-201ENST00000264010 AP5M1Q9H0R1 490 aa17.07■□□□□ 0.32
CTCF-201ENST00000264010 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.07■□□□□ 0.32
CTCF-201ENST00000264010 SNX9Q9Y5X1 595 aa17.07■□□□□ 0.32
CTCF-201ENST00000264010 STK10O94804 968 aaKnown RBP17.07■□□□□ 0.32
CTCF-201ENST00000264010 CEP70Q8NHQ1 597 aa17.07■□□□□ 0.32
CTCF-201ENST00000264010 PCYT2Q99447 389 aa17.07■□□□□ 0.32
CTCF-201ENST00000264010 M0QZ92 97 aa17.06■□□□□ 0.32
CTCF-201ENST00000264010 CA4P22748 312 aa17.06■□□□□ 0.32
CTCF-201ENST00000264010 VCPP55072 806 aaKnown RBP17.06■□□□□ 0.32
CTCF-201ENST00000264010 ROR1Q01973 937 aa17.06■□□□□ 0.32
CTCF-201ENST00000264010 ZNF268Q14587 947 aaPredicted RBP17.06■□□□□ 0.32
CTCF-201ENST00000264010 RIBC1Q8N443 379 aaPredicted RBP17.06■□□□□ 0.32
CTCF-201ENST00000264010 ATP11CQ8NB49 1132 aa17.06■□□□□ 0.32
CTCF-201ENST00000264010 SLITRK1Q96PX8 696 aa17.06■□□□□ 0.32
CTCF-201ENST00000264010 SCOCQ9UIL1 159 aa17.06■□□□□ 0.32
CTCF-201ENST00000264010 L3MBTL1Q9Y468 752 aa17.06■□□□□ 0.32
CTCF-201ENST00000264010 H3BRB1 525 aa17.06■□□□□ 0.32
CTCF-201ENST00000264010 ZBED1O96006 694 aa17.06■□□□□ 0.32
CTCF-201ENST00000264010 CYP2C8P10632 490 aa17.06■□□□□ 0.32
CTCF-201ENST00000264010 ATP13A4Q4VNC1 1196 aa17.06■□□□□ 0.32
CTCF-201ENST00000264010 JADE1Q6IE81 842 aa17.06■□□□□ 0.32
CTCF-201ENST00000264010 ZC3H18Q86VM9 953 aaKnown RBP17.06■□□□□ 0.32
CTCF-201ENST00000264010 SPATA24Q86W54 205 aa17.06■□□□□ 0.32
CTCF-201ENST00000264010 TUT1Q9H6E5 874 aaKnown RBP17.06■□□□□ 0.32
CTCF-201ENST00000264010 RSAD1Q9HA92 442 aa17.06■□□□□ 0.32
CTCF-201ENST00000264010 DNPEPQ9ULA0 475 aa17.06■□□□□ 0.32
CTCF-201ENST00000264010 R3HDM2Q9Y2K5 976 aaKnown RBP17.06■□□□□ 0.32
CTCF-201ENST00000264010 PTPRJQ12913 1337 aa17.06■□□□□ 0.32
CTCF-201ENST00000264010 CNTNAP2Q9UHC6 1331 aa17.06■□□□□ 0.32
CTCF-201ENST00000264010 IGKV6D-21A0A0A0MT36 114 aa17.06■□□□□ 0.32
CTCF-201ENST00000264010 H0YGN5 161 aa17.06■□□□□ 0.32
CTCF-201ENST00000264010 GPD1P21695 349 aa17.06■□□□□ 0.32
CTCF-201ENST00000264010 CLDN10P78369 228 aa17.06■□□□□ 0.32
CTCF-201ENST00000264010 HACE1Q8IYU2 909 aa17.06■□□□□ 0.32
CTCF-201ENST00000264010 CENPTQ96BT3 561 aa17.06■□□□□ 0.32
CTCF-201ENST00000264010 NFS1Q9Y697 457 aa17.06■□□□□ 0.32
CTCF-201ENST00000264010 GRIN2DO15399 1336 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 GCLCP48506 637 aaPredicted RBP17.05■□□□□ 0.32
CTCF-201ENST00000264010 DGKDQ16760 1214 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 KCNT1Q5JUK3 1230 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 CYB5D1Q6P9G0 228 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 ZNF449Q6P9G9 518 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 EMC1Q8N766 993 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 SHCBP1Q8NEM2 672 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 PDGFCQ9NRA1 345 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 NINJ2Q9NZG7 142 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 RRN3P2A6NIE6 340 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 PIK3R2O00459 728 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 DNALI1O14645 258 aaPredicted RBP17.05■□□□□ 0.32
CTCF-201ENST00000264010 INHBAP08476 426 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 GNAT1P11488 350 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 EDNRBP24530 442 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 ADORA2AP29274 412 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 RGS7P49802 495 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 SPARCL1Q14515 664 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 MORF4L2Q15014 288 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 DCAF4L1Q3SXM0 396 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.05■□□□□ 0.32
CTCF-201ENST00000264010 FAM149B1Q96BN6 582 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 SENP1Q9P0U3 644 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 FAF1Q9UNN5 650 aaPredicted RBP17.05■□□□□ 0.32
CTCF-201ENST00000264010 COL4A5P29400 1685 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 SIGLEC16A6NMB1 481 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 NFICP08651 508 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 ZNF286BP0CG31 522 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 AUHQ13825 339 aaKnown RBP17.05■□□□□ 0.32
CTCF-201ENST00000264010 KLHL38Q2WGJ6 581 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 B4GALNT2Q8NHY0 566 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 FAF2Q96CS3 445 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.05■□□□□ 0.32
CTCF-201ENST00000264010 RBPJLQ9UBG7 517 aa17.05■□□□□ 0.32
CTCF-201ENST00000264010 A8MXQ7 604 aa17.04■□□□□ 0.32
CTCF-201ENST00000264010 TCP11X1B4DZS4 312 aa17.04■□□□□ 0.32
CTCF-201ENST00000264010 STRNO43815 780 aa17.04■□□□□ 0.32
CTCF-201ENST00000264010 ARIH2O95376 493 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms