RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 GPR88Q9GZN0 384 aa19.47■□□□□ 0.71
SDF4-201ENST00000263741 PIDD1Q9HB75 910 aa19.47■□□□□ 0.71
SDF4-201ENST00000263741 SP100P23497 879 aaPredicted RBP19.47■□□□□ 0.71
SDF4-201ENST00000263741 BRD2P25440 801 aaKnown RBP19.47■□□□□ 0.71
SDF4-201ENST00000263741 ZNF132P52740 706 aa19.47■□□□□ 0.71
SDF4-201ENST00000263741 NR1I3Q14994 352 aa19.47■□□□□ 0.71
SDF4-201ENST00000263741 GRASPQ7Z6J2 395 aaPredicted RBP19.47■□□□□ 0.71
SDF4-201ENST00000263741 GPR149Q86SP6 731 aa19.47■□□□□ 0.71
SDF4-201ENST00000263741 TTC39CQ8N584 583 aa19.47■□□□□ 0.71
SDF4-201ENST00000263741 TFAP2BQ92481 460 aa19.47■□□□□ 0.71
SDF4-201ENST00000263741 SHC3Q92529 594 aa19.47■□□□□ 0.71
SDF4-201ENST00000263741 JAKMIP2Q96AA8 810 aa19.47■□□□□ 0.71
SDF4-201ENST00000263741 ZSWIM1Q9BR11 485 aa19.47■□□□□ 0.71
SDF4-201ENST00000263741 NAA15Q9BXJ9 866 aaKnown RBP19.47■□□□□ 0.71
SDF4-201ENST00000263741 XPO4Q9C0E2 1151 aaKnown RBP19.47■□□□□ 0.71
SDF4-201ENST00000263741 ADAM7Q9H2U9 754 aa19.47■□□□□ 0.71
SDF4-201ENST00000263741 ABCB6Q9NP58 842 aa19.47■□□□□ 0.71
SDF4-201ENST00000263741 PLCB1Q9NQ66 1216 aa19.47■□□□□ 0.71
SDF4-201ENST00000263741 ANAPC1Q9H1A4 1944 aa19.46■□□□□ 0.71
SDF4-201ENST00000263741 F8VP50 259 aa19.46■□□□□ 0.71
SDF4-201ENST00000263741 MBTPS2O43462 519 aa19.46■□□□□ 0.71
SDF4-201ENST00000263741 BEST1O76090 585 aa19.46■□□□□ 0.71
SDF4-201ENST00000263741 ALDH1A3P47895 512 aa19.46■□□□□ 0.71
SDF4-201ENST00000263741 SMARCB1Q12824 385 aa19.46■□□□□ 0.71
SDF4-201ENST00000263741 MTMR3Q13615 1198 aa19.46■□□□□ 0.71
SDF4-201ENST00000263741 DRAP1Q14919 205 aaPredicted RBP19.46■□□□□ 0.71
SDF4-201ENST00000263741 LEXMQ3ZCV2 418 aa19.46■□□□□ 0.71
SDF4-201ENST00000263741 FUBP3Q96I24 572 aaKnown RBP eCLIP19.46■□□□□ 0.71
SDF4-201ENST00000263741 KCNK16Q96T55 309 aa19.46■□□□□ 0.71
SDF4-201ENST00000263741 FOXN3O00409 490 aaPredicted RBP19.45■□□□□ 0.7
SDF4-201ENST00000263741 NRG2O14511 850 aaPredicted RBP19.45■□□□□ 0.7
SDF4-201ENST00000263741 AP5Z1O43299 807 aa19.45■□□□□ 0.7
SDF4-201ENST00000263741 HNRNPA1P09651 372 aaKnown RBP eCLIP19.45■□□□□ 0.7
SDF4-201ENST00000263741 IL9P15248 144 aa19.45■□□□□ 0.7
SDF4-201ENST00000263741 HOXA9P31269 272 aa19.45■□□□□ 0.7
SDF4-201ENST00000263741 GRIK1P39086 918 aa19.45■□□□□ 0.7
SDF4-201ENST00000263741 SMAD4Q13485 552 aaKnown RBP19.45■□□□□ 0.7
SDF4-201ENST00000263741 PTCRAQ6ISU1 281 aaPredicted RBP19.45■□□□□ 0.7
SDF4-201ENST00000263741 CES5AQ6NT32 575 aa19.45■□□□□ 0.7
SDF4-201ENST00000263741 ENOSF1Q7L5Y1 443 aa19.45■□□□□ 0.7
SDF4-201ENST00000263741 HS6ST3Q8IZP7 471 aa19.45■□□□□ 0.7
SDF4-201ENST00000263741 CMASQ8NFW8 434 aaPredicted RBP19.45■□□□□ 0.7
SDF4-201ENST00000263741 NEK11Q8NG66 645 aa19.45■□□□□ 0.7
SDF4-201ENST00000263741 CORO1BQ9BR76 489 aa19.45■□□□□ 0.7
SDF4-201ENST00000263741 AP1G2O75843 785 aa19.45■□□□□ 0.7
SDF4-201ENST00000263741 TUFMP49411 452 aaKnown RBP19.45■□□□□ 0.7
SDF4-201ENST00000263741 GOLGA7BQ2TAP0 167 aa19.45■□□□□ 0.7
SDF4-201ENST00000263741 SMARCD1Q96GM5 515 aa19.45■□□□□ 0.7
SDF4-201ENST00000263741 POMKQ9H5K3 350 aa19.45■□□□□ 0.7
SDF4-201ENST00000263741 DNMT3BQ9UBC3 853 aaKnown RBP19.45■□□□□ 0.7
SDF4-201ENST00000263741 MAFFQ9ULX9 164 aa19.45■□□□□ 0.7
SDF4-201ENST00000263741 F8VZ95 297 aa19.44■□□□□ 0.7
SDF4-201ENST00000263741 CYP26A1O43174 497 aa19.44■□□□□ 0.7
SDF4-201ENST00000263741 EPHB3P54753 998 aa19.44■□□□□ 0.7
SDF4-201ENST00000263741 ITIH3Q06033 890 aa19.44■□□□□ 0.7
SDF4-201ENST00000263741 ZMIZ2Q8NF64 920 aa19.44■□□□□ 0.7
SDF4-201ENST00000263741 FAM124BQ9H5Z6 455 aaPredicted RBP19.44■□□□□ 0.7
SDF4-201ENST00000263741 ZNF334Q9HCZ1 680 aaPredicted RBP19.44■□□□□ 0.7
SDF4-201ENST00000263741 CNTN6Q9UQ52 1028 aa19.44■□□□□ 0.7
SDF4-201ENST00000263741 XYLBO75191 536 aa19.44■□□□□ 0.7
SDF4-201ENST00000263741 TRIM21P19474 475 aaKnown RBP19.44■□□□□ 0.7
SDF4-201ENST00000263741 MAGEA11P43364 429 aa19.44■□□□□ 0.7
SDF4-201ENST00000263741 MAP3K7CLP57077 242 aa19.44■□□□□ 0.7
SDF4-201ENST00000263741 IFRD2Q12894 506 aaPredicted RBP19.44■□□□□ 0.7
SDF4-201ENST00000263741 PLD1Q13393 1074 aa19.44■□□□□ 0.7
SDF4-201ENST00000263741 CBX2Q14781 532 aaPredicted RBP19.44■□□□□ 0.7
SDF4-201ENST00000263741 SGO2Q562F6 1265 aa19.44■□□□□ 0.7
SDF4-201ENST00000263741 SUSD6Q92537 303 aa19.44■□□□□ 0.7
SDF4-201ENST00000263741 HNRNPABQ99729 332 aaKnown RBP19.44■□□□□ 0.7
SDF4-201ENST00000263741 SMOQ99835 787 aa19.44■□□□□ 0.7
SDF4-201ENST00000263741 HSFX1Q9UBD0 423 aa19.44■□□□□ 0.7
SDF4-201ENST00000263741 TSPAN16Q9UKR8 245 aa19.44■□□□□ 0.7
SDF4-201ENST00000263741 MAGED2Q9UNF1 606 aaPredicted RBP19.44■□□□□ 0.7
SDF4-201ENST00000263741 ATP8B3O60423 1300 aa19.43■□□□□ 0.7
SDF4-201ENST00000263741 FAM200BP0CF97 657 aa19.43■□□□□ 0.7
SDF4-201ENST00000263741 SLC5A9Q2M3M2 681 aa19.43■□□□□ 0.7
SDF4-201ENST00000263741 VSTM1Q6UX27 236 aa19.43■□□□□ 0.7
SDF4-201ENST00000263741 CLEC20AQ6ZU45 233 aa19.43■□□□□ 0.7
SDF4-201ENST00000263741 TTC30AQ86WT1 665 aa19.43■□□□□ 0.7
SDF4-201ENST00000263741 FAM81BQ96LP2 452 aa19.43■□□□□ 0.7
SDF4-201ENST00000263741 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.43■□□□□ 0.72e-6■■□□□ 12.4
SDF4-201ENST00000263741 A0A0C4DFX4 3053 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 FAM170AA1A519 330 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 O00370 1275 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 ADCY5O95622 1261 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 TPM3P06753 285 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 RHOP08100 348 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 PAEPP09466 180 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 GJA1P17302 382 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 GNA15P30679 374 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 ATAT1Q5SQI0 421 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 DNAJB7Q7Z6W7 309 aaPredicted RBP19.42■□□□□ 0.7
SDF4-201ENST00000263741 SLC47A2Q86VL8 602 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 ELMOD1Q8N336 334 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 UBA3Q8TBC4 463 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 ING5Q8WYH8 240 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 DMAP1Q9NPF5 467 aaPredicted RBP19.42■□□□□ 0.7
SDF4-201ENST00000263741 CLUHO75153 1309 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 A0A1W2PQC6 194 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 TULP2O00295 520 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms