RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 FAM13AO94988 1023 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 COL6A2P12110 1019 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 NELFEP18615 380 aaKnown RBP8.73□□□□□ -1.01
LDB3-201ENST00000263066 TCF7P36402 384 aaPredicted RBP8.73□□□□□ -1.01
LDB3-201ENST00000263066 NCKAP1LP55160 1127 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 OSTNP61366 133 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 AMPD3Q01432 767 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 LMNB2Q03252 620 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 PCSK7Q16549 785 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 XKR9Q5GH70 373 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 APPL2Q8NEU8 664 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 CKAP2Q8WWK9 683 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 GAB3Q8WWW8 586 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 TTC17Q96AE7 1141 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 UCKL1Q9NWZ5 548 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 KIAA1024Q9UPX6 916 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 HPS5Q9UPZ3 1129 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 PRRC2BQ5JSZ5 2229 aaKnown RBP8.72□□□□□ -1.01
LDB3-201ENST00000263066 ZNF646O15015 1829 aaPredicted RBP8.72□□□□□ -1.01
LDB3-201ENST00000263066 TAF1LQ8IZX4 1826 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 FUOMA2VDF0 154 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 ARHGEF35A5YM69 484 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 AOC2O75106 756 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 TNFAIP8O95379 198 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 PRKACAP17612 351 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 POLR2EP19388 210 aaKnown RBP8.72□□□□□ -1.01
LDB3-201ENST00000263066 JAK1P23458 1154 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 RCVRNP35243 200 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 MTERF2Q49AM1 385 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 CEP55Q53EZ4 464 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 PRAMEF19Q5SWL8 479 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 UBL4BQ8N7F7 174 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 P2RX5Q93086 422 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 FERD3LQ96RJ6 166 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 MED15Q96RN5 788 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 ANO3Q9BYT9 981 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 AIPL1Q9NZN9 384 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 WARS2Q9UGM6 360 aaKnown RBP8.72□□□□□ -1.01
LDB3-201ENST00000263066 NUP98P52948 1817 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 MYO7AQ13402 2215 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 GON4LQ3T8J9 2241 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 PNMA6FA0A0J9YX94 578 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 E9PMD0 336 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 PDHXO00330 501 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 DYNC1LI2O43237 492 aaPredicted RBP8.72□□□□□ -1.01
LDB3-201ENST00000263066 C6orf222P0C671 652 aaPredicted RBP8.72□□□□□ -1.01
LDB3-201ENST00000263066 KRT3P12035 628 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 AMPD1P23109 780 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 BDNFP23560 247 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 DEFB115Q30KQ5 88 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 RARS2Q5T160 578 aaKnown RBP8.72□□□□□ -1.01
LDB3-201ENST00000263066 OGFOD2Q6N063 350 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 KRT25Q7Z3Z0 450 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 GPR141Q7Z602 305 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 ZBED8Q8IZ13 594 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 SPOCK2Q92563 424 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 UTP4Q969X6 686 aaKnown RBP8.72□□□□□ -1.01
LDB3-201ENST00000263066 PPWD1Q96BP3 646 aaKnown RBP8.72□□□□□ -1.01
LDB3-201ENST00000263066 ZNF512BQ96KM6 892 aaPredicted RBP8.72□□□□□ -1.01
LDB3-201ENST00000263066 CADM1Q9BY67 442 aaKnown RBP8.72□□□□□ -1.01
LDB3-201ENST00000263066 ANKFY1Q9P2R3 1169 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 PCDHA6Q9UN73 950 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 CHKBQ9Y259 395 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 PCDHA8Q9Y5H6 950 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 BCORQ6W2J9 1755 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 A6NL46 340 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 A8MU76 341 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 H7C0C1 242 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 GOLGA8RI6L899 631 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 KPNA4O00629 521 aaPredicted RBP8.72□□□□□ -1.01
LDB3-201ENST00000263066 GSC2O15499 205 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 SERPING1P05155 500 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 UQCRBP14927 111 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 PTGS2P35354 604 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 ALDH18A1P54886 795 aaKnown RBP8.72□□□□□ -1.01
LDB3-201ENST00000263066 BACE1P56817 501 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 CDK17Q00537 523 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 FOLH1Q04609 750 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 TUBA3CQ13748 450 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 NCOA4Q13772 614 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 LRRC41Q15345 812 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 DCAF17Q5H9S7 520 aaPredicted RBP8.72□□□□□ -1.01
LDB3-201ENST00000263066 CEP78Q5JTW2 689 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 FAM102BQ5T8I3 360 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 ALKBH5Q6P6C2 394 aaKnown RBP8.72□□□□□ -1.01
LDB3-201ENST00000263066 TRAF7Q6Q0C0 670 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 CCDC81Q6ZN84 652 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 RIPOR1Q6ZS17 1223 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 CYP4V2Q6ZWL3 525 aaPredicted RBP8.72□□□□□ -1.01
LDB3-201ENST00000263066 ERO1BQ86YB8 467 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 JAMLQ86YT9 394 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 ENDOVQ8N8Q3 282 aaKnown RBP8.72□□□□□ -1.01
LDB3-201ENST00000263066 PYROXD1Q8WU10 500 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 TLCD1Q96CP7 247 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 CLPTM1LQ96KA5 538 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 PACSIN1Q9BY11 444 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 RNF26Q9BY78 433 aaPredicted RBP8.72□□□□□ -1.01
LDB3-201ENST00000263066 OSBPL6Q9BZF3 934 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 CCSER2Q9H7U1 834 aa8.72□□□□□ -1.01
LDB3-201ENST00000263066 ANGPTL3Q9Y5C1 460 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms