RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 MIEF2Q96C03 454 aa14.29□□□□□ -0.12
VMP1-201ENST00000262291 SGSM3Q96HU1 749 aa14.29□□□□□ -0.12
VMP1-201ENST00000262291 SEMA4AQ9H3S1 761 aa14.29□□□□□ -0.12
VMP1-201ENST00000262291 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.29□□□□□ -0.12
VMP1-201ENST00000262291 NFS1Q9Y697 457 aa14.29□□□□□ -0.12
VMP1-201ENST00000262291 PFKMP08237 780 aa14.29□□□□□ -0.12
VMP1-201ENST00000262291 CCDC130P13994 396 aa14.29□□□□□ -0.12
VMP1-201ENST00000262291 ADORA2BP29275 332 aa14.29□□□□□ -0.12
VMP1-201ENST00000262291 KLF1Q13351 362 aaPredicted RBP14.29□□□□□ -0.12
VMP1-201ENST00000262291 C9orf57Q5W0N0 161 aa14.29□□□□□ -0.12
VMP1-201ENST00000262291 NAIF1Q69YI7 327 aaPredicted RBP14.29□□□□□ -0.12
VMP1-201ENST00000262291 TRNP1Q6NT89 227 aa14.29□□□□□ -0.12
VMP1-201ENST00000262291 RNF217Q8TC41 542 aa14.29□□□□□ -0.12
VMP1-201ENST00000262291 LPPQ93052 612 aa14.29□□□□□ -0.12
VMP1-201ENST00000262291 B3GNT5Q9BYG0 378 aa14.29□□□□□ -0.12
VMP1-201ENST00000262291 MIS12Q9H081 205 aa14.29□□□□□ -0.12
VMP1-201ENST00000262291 LHX5Q9H2C1 402 aa14.29□□□□□ -0.12
VMP1-201ENST00000262291 CYP3A43Q9HB55 503 aa14.29□□□□□ -0.12
VMP1-201ENST00000262291 GRIN2DO15399 1336 aa14.29□□□□□ -0.12
VMP1-201ENST00000262291 DCDC2CA8MYV0 355 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 GOLGA8KD6RF30 607 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 LRCH4O75427 683 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 FGFR1P11362 822 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 VDRP11473 427 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 AKR1A1P14550 325 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 ELNP15502 786 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 CHKAP35790 457 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 FNTAP49354 379 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 RABGGTBP53611 331 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 PRKCZQ05513 592 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 SOWAHAQ2M3V2 549 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 GDF6Q6KF10 455 aaPredicted RBP14.28□□□□□ -0.12
VMP1-201ENST00000262291 PMF1Q6P1K2 205 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 FAM183BPQ6ZVS7 135 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 GSTA5Q7RTV2 222 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 BEST2Q8NFU1 509 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 EXD1Q8NHP7 514 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 DNPEPQ9ULA0 475 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 IPPQ9Y573 584 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 TLDC2A0PJX2 215 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 SIGLEC16A6NMB1 481 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 PODXLO00592 558 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 NDUFAB1O14561 156 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 EIF3HO15372 352 aaKnown RBP eCLIP14.28□□□□□ -0.12
VMP1-201ENST00000262291 AOC2O75106 756 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 RARBP10826 455 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 ADCY8P40145 1251 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 PMS2P54278 862 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 ATP11AP98196 1134 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 CNGA2Q16280 664 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 KYAT1Q16773 422 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 SPOCD1Q6ZMY3 1216 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 FAM228AQ86W67 206 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 TTC30AQ86WT1 665 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 SCUBE3Q8IX30 993 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 OTUD6BQ8N6M0 293 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 C12orf50Q8NA57 414 aaPredicted RBP14.28□□□□□ -0.12
VMP1-201ENST00000262291 SMG8Q8ND04 991 aaKnown RBP14.28□□□□□ -0.12
VMP1-201ENST00000262291 EPB41L4BQ9H329 900 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 VRTNQ9H8Y1 702 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 A8MXQ7 604 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 IFFO1Q0D2I5 559 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 ZBTB6Q15916 424 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 CEP57Q86XR8 500 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 CLEC4CQ8WTT0 213 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 SOCS4Q8WXH5 440 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 DDX23Q9BUQ8 820 aaKnown RBP14.28□□□□□ -0.12
VMP1-201ENST00000262291 CDY2AQ9Y6F7 541 aa14.28□□□□□ -0.12
VMP1-201ENST00000262291 PPFIA2O75334 1257 aa14.27□□□□□ -0.12
VMP1-201ENST00000262291 SLCO1A2P46721 670 aa14.27□□□□□ -0.12
VMP1-201ENST00000262291 ITGA8P53708 1063 aa14.27□□□□□ -0.12
VMP1-201ENST00000262291 PLCB3Q01970 1234 aa14.27□□□□□ -0.12
VMP1-201ENST00000262291 INCA1Q0VD86 236 aa14.27□□□□□ -0.12
VMP1-201ENST00000262291 PIGHQ14442 188 aaPredicted RBP14.27□□□□□ -0.12
VMP1-201ENST00000262291 ALKAL1Q6UXT8 129 aa14.27□□□□□ -0.12
VMP1-201ENST00000262291 RNF169Q8NCN4 708 aa14.27□□□□□ -0.12
VMP1-201ENST00000262291 FAXDC2Q96IV6 333 aa14.27□□□□□ -0.12
VMP1-201ENST00000262291 STRIP2Q9ULQ0 834 aa14.27□□□□□ -0.12
VMP1-201ENST00000262291 TP73O15350 636 aa14.27□□□□□ -0.13
VMP1-201ENST00000262291 ATP2C2O75185 946 aa14.27□□□□□ -0.13
VMP1-201ENST00000262291 GABBR2O75899 941 aa14.27□□□□□ -0.13
VMP1-201ENST00000262291 KIAA0754O94854 1291 aa14.27□□□□□ -0.13
VMP1-201ENST00000262291 ACAT1P24752 427 aaKnown RBP14.27□□□□□ -0.13
VMP1-201ENST00000262291 CCND3P30281 292 aaPredicted RBP14.27□□□□□ -0.13
VMP1-201ENST00000262291 MAN1A1P33908 653 aa14.27□□□□□ -0.13
VMP1-201ENST00000262291 MMRN1Q13201 1228 aa14.27□□□□□ -0.13
VMP1-201ENST00000262291 BIRC2Q13490 618 aa14.27□□□□□ -0.13
VMP1-201ENST00000262291 SLC29A2Q14542 456 aa14.27□□□□□ -0.13
VMP1-201ENST00000262291 KRT71Q3SY84 523 aa14.27□□□□□ -0.13
VMP1-201ENST00000262291 HP1BP3Q5SSJ5 553 aaPredicted RBP14.27□□□□□ -0.13
VMP1-201ENST00000262291 RCOR2Q8IZ40 523 aa14.27□□□□□ -0.13
VMP1-201ENST00000262291 EIF1ADQ8N9N8 165 aaKnown RBP14.27□□□□□ -0.13
VMP1-201ENST00000262291 LRRN4Q8WUT4 740 aa14.27□□□□□ -0.13
VMP1-201ENST00000262291 NDRG1Q92597 394 aaKnown RBP14.27□□□□□ -0.13
VMP1-201ENST00000262291 CFAP57Q96MR6 1250 aa14.27□□□□□ -0.13
VMP1-201ENST00000262291 TXLNGYQ9BZA5 131 aa14.27□□□□□ -0.13
VMP1-201ENST00000262291 GPATCH2LQ9NWQ4 482 aa14.27□□□□□ -0.13
VMP1-201ENST00000262291 MCM8Q9UJA3 840 aa14.27□□□□□ -0.13
VMP1-201ENST00000262291 ZNF148Q9UQR1 794 aa14.27□□□□□ -0.13
VMP1-201ENST00000262291 ZNF236Q9UL36 1845 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms