RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 C2CD2Q9Y426 696 aa18.29■□□□□ 0.52
TRAM1-201ENST00000262213 COL11A2P13942 1736 aaPredicted RBP18.28■□□□□ 0.52
TRAM1-201ENST00000262213 KIF3CO14782 793 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 PLA2G6O60733 806 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 AP1G2O75843 785 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 DGAT1O75907 488 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 ENO1P06733 434 aaKnown RBP18.28■□□□□ 0.52
TRAM1-201ENST00000262213 AMPD1P23109 780 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 ELK3P41970 407 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 SLC27A3Q5K4L6 730 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 PDIK1LQ8N165 341 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 EMC1Q8N766 993 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 NAT8LQ8N9F0 302 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 FBXO27Q8NI29 283 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 ATP6V0A1Q93050 837 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 SH3GL3Q99963 347 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 NMUR2Q9GZQ4 415 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 VPS11Q9H270 941 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 PAPOLBQ9NRJ5 636 aaKnown RBP18.28■□□□□ 0.52
TRAM1-201ENST00000262213 ARHGAP28Q9P2N2 729 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 MARCOQ9UEW3 520 aaPredicted RBP18.28■□□□□ 0.52
TRAM1-201ENST00000262213 FBXO40Q9UH90 709 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 NFASCO94856 1347 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 CNTNAP1P78357 1384 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 E5RJQ4 531 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 TM9SF1O15321 606 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 AVILO75366 819 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 CALB1P05937 261 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 IL1R2P27930 398 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 RFC1P35251 1148 aaPredicted RBP18.28■□□□□ 0.52
TRAM1-201ENST00000262213 PGM1P36871 562 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 SLC34A1Q06495 639 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 KBTBD12Q3ZCT8 623 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 ZBTB33Q86T24 672 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 RFX6Q8HWS3 928 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 CTAGE3PQ8IX95 158 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 MCPH1Q8NEM0 835 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 ZNF398Q8TD17 642 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 CFAP36Q96G28 342 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 DEFB129Q9H1M3 183 aa18.28■□□□□ 0.52
TRAM1-201ENST00000262213 ZNF395Q9H8N7 513 aaPredicted RBP18.28■□□□□ 0.52
TRAM1-201ENST00000262213 DOCK5Q9H7D0 1870 aa18.27■□□□□ 0.52
TRAM1-201ENST00000262213 H3BRJ5 948 aa18.27■□□□□ 0.52
TRAM1-201ENST00000262213 UBTFL6P0CB48 400 aaPredicted RBP18.27■□□□□ 0.52
TRAM1-201ENST00000262213 SKIP12755 728 aa18.27■□□□□ 0.52
TRAM1-201ENST00000262213 TAF5Q15542 800 aa18.27■□□□□ 0.52
TRAM1-201ENST00000262213 JOSD2Q8TAC2 188 aa18.27■□□□□ 0.52
TRAM1-201ENST00000262213 IMPG2Q9BZV3 1241 aa18.27■□□□□ 0.52
TRAM1-201ENST00000262213 C17orf75Q9HAS0 396 aa18.27■□□□□ 0.52
TRAM1-201ENST00000262213 B2RBV5 119 aa18.27■□□□□ 0.51
TRAM1-201ENST00000262213 H0YIN7 160 aa18.27■□□□□ 0.51
TRAM1-201ENST00000262213 K7ERI5 159 aa18.27■□□□□ 0.51
TRAM1-201ENST00000262213 INHBAP08476 426 aa18.27■□□□□ 0.51
TRAM1-201ENST00000262213 KCNA3P22001 575 aa18.27■□□□□ 0.51
TRAM1-201ENST00000262213 GCLCP48506 637 aaPredicted RBP18.27■□□□□ 0.51
TRAM1-201ENST00000262213 POLE2P56282 527 aa18.27■□□□□ 0.51
TRAM1-201ENST00000262213 AP1ARQ63HQ0 302 aa18.27■□□□□ 0.51
TRAM1-201ENST00000262213 PCGF5Q86SE9 256 aa18.27■□□□□ 0.51
TRAM1-201ENST00000262213 PPFIBP2Q8ND30 876 aa18.27■□□□□ 0.51
TRAM1-201ENST00000262213 DEPTORQ8TB45 409 aa18.27■□□□□ 0.51
TRAM1-201ENST00000262213 HSPH1Q92598 858 aa18.27■□□□□ 0.51
TRAM1-201ENST00000262213 SKA1Q96BD8 255 aa18.27■□□□□ 0.51
TRAM1-201ENST00000262213 FAM136AQ96C01 138 aa18.27■□□□□ 0.51
TRAM1-201ENST00000262213 OXNAD1Q96HP4 312 aaPredicted RBP18.27■□□□□ 0.51
TRAM1-201ENST00000262213 WNK4Q96J92 1243 aa18.27■□□□□ 0.51
TRAM1-201ENST00000262213 CLPTM1LQ96KA5 538 aa18.27■□□□□ 0.51
TRAM1-201ENST00000262213 DDX50Q9BQ39 737 aaKnown RBP18.27■□□□□ 0.51
TRAM1-201ENST00000262213 IQCGQ9H095 443 aaKnown RBP18.27■□□□□ 0.51
TRAM1-201ENST00000262213 VCXQ9H320 206 aa18.27■□□□□ 0.51
TRAM1-201ENST00000262213 SCOCQ9UIL1 159 aa18.27■□□□□ 0.51
TRAM1-201ENST00000262213 MTO1Q9Y2Z2 717 aaKnown RBP18.27■□□□□ 0.51
TRAM1-201ENST00000262213 SIGLEC16A6NMB1 481 aa18.26■□□□□ 0.51
TRAM1-201ENST00000262213 KBTBD13C9JR72 458 aa18.26■□□□□ 0.51
TRAM1-201ENST00000262213 HNRNPCL1O60812 293 aaKnown RBP18.26■□□□□ 0.51
TRAM1-201ENST00000262213 STAM2O75886 525 aa18.26■□□□□ 0.51
TRAM1-201ENST00000262213 STBD1O95210 358 aa18.26■□□□□ 0.51
TRAM1-201ENST00000262213 EDN1P05305 212 aa18.26■□□□□ 0.51
TRAM1-201ENST00000262213 DLDP09622 509 aaKnown RBP18.26■□□□□ 0.51
TRAM1-201ENST00000262213 TBXAS1P24557 533 aaPredicted RBP18.26■□□□□ 0.51
TRAM1-201ENST00000262213 PAPOLAP51003 745 aaKnown RBP18.26■□□□□ 0.51
TRAM1-201ENST00000262213 KDSRQ06136 332 aa18.26■□□□□ 0.51
TRAM1-201ENST00000262213 ORC1Q13415 861 aa18.26■□□□□ 0.51
TRAM1-201ENST00000262213 RASA2Q15283 850 aa18.26■□□□□ 0.51
TRAM1-201ENST00000262213 TMEM35BQ8NCS4 154 aa18.26■□□□□ 0.51
TRAM1-201ENST00000262213 CALN1Q9BXU9 219 aa18.26■□□□□ 0.51
TRAM1-201ENST00000262213 SYNCQ9H7C4 482 aa18.26■□□□□ 0.51
TRAM1-201ENST00000262213 PPCSQ9HAB8 311 aa18.26■□□□□ 0.51
TRAM1-201ENST00000262213 SSU72Q9NP77 194 aaKnown RBP18.26■□□□□ 0.51
TRAM1-201ENST00000262213 DDX56Q9NY93 547 aaKnown RBP18.26■□□□□ 0.51
TRAM1-201ENST00000262213 PPARGC1AQ9UBK2 798 aaKnown RBP18.26■□□□□ 0.51
TRAM1-201ENST00000262213 SLC9A2Q9UBY0 812 aa18.26■□□□□ 0.51
TRAM1-201ENST00000262213 LRCH1Q9Y2L9 728 aa18.26■□□□□ 0.51
TRAM1-201ENST00000262213 RIPK3Q9Y572 518 aa18.26■□□□□ 0.51
TRAM1-201ENST00000262213 YY1P25490 414 aa18.26■□□□□ 0.51
TRAM1-201ENST00000262213 TNFSF9P41273 254 aa18.26■□□□□ 0.51
TRAM1-201ENST00000262213 HIRAP54198 1017 aaPredicted RBP18.26■□□□□ 0.51
TRAM1-201ENST00000262213 MYL6P60660 151 aa18.26■□□□□ 0.51
TRAM1-201ENST00000262213 CLDN10P78369 228 aa18.26■□□□□ 0.51
TRAM1-201ENST00000262213 PIGHQ14442 188 aaPredicted RBP18.26■□□□□ 0.51
TRAM1-201ENST00000262213 EMC2Q15006 297 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms