RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 TMEM35BQ8NCS4 154 aa15.18■□□□□ 0.02
SFSWAP-201ENST00000261674 DENND1AQ8TEH3 1009 aa15.18■□□□□ 0.02
SFSWAP-201ENST00000261674 NAF1Q96HR8 494 aaKnown RBP15.18■□□□□ 0.02
SFSWAP-201ENST00000261674 FBXO6Q9NRD1 293 aaPredicted RBP15.18■□□□□ 0.02
SFSWAP-201ENST00000261674 SLC5A4Q9NY91 659 aa15.18■□□□□ 0.02
SFSWAP-201ENST00000261674 ACTL7BQ9Y614 415 aa15.18■□□□□ 0.02
SFSWAP-201ENST00000261674 STAM2O75886 525 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 MT-ND3P03897 115 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 T-ENOLP0DO92 83 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 ALADP13716 330 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 CCNB1P14635 433 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 YY1P25490 414 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 YARSP54577 528 aaKnown RBP15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 C1QBPQ07021 282 aaKnown RBP15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 SNAPC2Q13487 334 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 MORF4L2Q15014 288 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 PLEKHG4Q58EX7 1191 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 MDH1BQ5I0G3 518 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 GJC2Q5T442 439 aaPredicted RBP15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 C15orf39Q6ZRI6 1047 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 PHF13Q86YI8 300 aaPredicted RBP15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 VPS52Q8N1B4 723 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 RIBC1Q8N443 379 aaPredicted RBP15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 NSUN6Q8TEA1 469 aaKnown RBP15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 C17orf75Q9HAS0 396 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 CISHQ9NSE2 258 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 RBPJLQ9UBG7 517 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 MYH9P35579 1960 aaKnown RBP15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 hCG_1818297A0A087WSY0 165 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 ALOX15BO15296 676 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 RGS20O76081 388 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 ITGBL1O95965 494 aaPredicted RBP15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 MYCNP04198 464 aaPredicted RBP15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 RAP1GAPP47736 663 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 ARL4CP56559 192 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 SMAD1Q15797 465 aaKnown RBP15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 RNASEH2BQ5TBB1 312 aaKnown RBP15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 CEP128Q6ZU80 1094 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 AGGF1Q8N302 714 aaeCLIP15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 KCTD6Q8NC69 237 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 FAM111AQ96PZ2 611 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 SPATC1LQ9H0A9 340 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 RNPEPL1Q9HAU8 725 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 RASSF2P50749 326 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 CDH8P55286 799 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 SLC8A3P57103 927 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 PTP4A2Q12974 167 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 MOGSQ13724 837 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 TAF5Q15542 800 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 FAXCQ5TGI0 409 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 NAIF1Q69YI7 327 aaPredicted RBP15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 RFWD3Q6PCD5 774 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 UNC45BQ8IWX7 931 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 JOSD2Q8TAC2 188 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 TFAP2BQ92481 460 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 MCUR1Q96AQ8 359 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 SLC7A6OSQ96CW6 309 aaPredicted RBP15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 DENND2DQ9H6A0 471 aaPredicted RBP15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 EURLQ9NYK6 297 aa15.17■□□□□ 0.02
SFSWAP-201ENST00000261674 A0A0G2JLL6 359 aaPredicted RBP15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 DKC1O60832 514 aaKnown RBP eCLIP15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 AVILO75366 819 aa15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 EDN1P05305 212 aa15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 KITP10721 976 aa15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 KRT3P12035 628 aa15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 KCNA2P16389 499 aa15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 CALB2P22676 271 aa15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 PHBP35232 272 aa15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 CDO1Q16878 200 aa15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 MUM1Q2TAK8 710 aa15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 XKR3Q5GH77 459 aa15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 PRRT2Q7Z6L0 340 aaPredicted RBP15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 PDIK1LQ8N165 341 aa15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 PPP1R12CQ9BZL4 782 aa15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 ARMCX1Q9P291 453 aa15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 MYCP01106 439 aaPredicted RBP15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 CALB1P05937 261 aa15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 ABHD2P08910 425 aa15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 TBXAS1P24557 533 aaPredicted RBP15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 PSMC1P62191 440 aaKnown RBP15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 SP2Q02086 613 aa15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 ACVR2BQ13705 512 aa15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 NOL9Q5SY16 702 aaKnown RBP15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 C10orf82Q8WW14 230 aa15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 PTPRN2Q92932 1015 aa15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 CFAP36Q96G28 342 aa15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 PRR11Q96HE9 360 aaPredicted RBP15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 OSBPL1AQ9BXW6 950 aa15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 IQCGQ9H095 443 aaKnown RBP15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 XPO7Q9UIA9 1087 aaKnown RBP15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 CLUHO75153 1309 aa15.16■□□□□ 0.02
SFSWAP-201ENST00000261674 LPXNO60711 386 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 PEX11AO75192 247 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 ATP5HO75947 161 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 RPL22P35268 128 aaKnown RBP15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 CDKN2BP42772 138 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 IRX4P78413 519 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 LDLRAD1Q5T700 205 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 ATP11CQ8NB49 1132 aa15.15■□□□□ 0.02
SFSWAP-201ENST00000261674 VCPIP1Q96JH7 1222 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms