RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 UNCXA6NJT0 531 aa11.35□□□□□ -0.59
CHRNA1-201ENST00000261007 NOP56O00567 594 aaKnown RBP11.35□□□□□ -0.59
CHRNA1-201ENST00000261007 TJP3O95049 919 aa11.35□□□□□ -0.59
CHRNA1-201ENST00000261007 CBX6O95503 412 aa11.35□□□□□ -0.59
CHRNA1-201ENST00000261007 HLA-DRAP01903 254 aa11.35□□□□□ -0.59
CHRNA1-201ENST00000261007 SLC1A1P43005 524 aa11.35□□□□□ -0.59
CHRNA1-201ENST00000261007 MAGEA4P43358 317 aa11.35□□□□□ -0.59
CHRNA1-201ENST00000261007 PSMC4P43686 418 aa11.35□□□□□ -0.59
CHRNA1-201ENST00000261007 CACNA2D1P54289 1103 aa11.35□□□□□ -0.59
CHRNA1-201ENST00000261007 ZC3H12AQ5D1E8 599 aaKnown RBP11.35□□□□□ -0.59
CHRNA1-201ENST00000261007 DPY19L2Q6NUT2 758 aa11.35□□□□□ -0.59
CHRNA1-201ENST00000261007 LRRC74BQ6ZQY2 392 aa11.35□□□□□ -0.59
CHRNA1-201ENST00000261007 CLNKQ7Z7G1 428 aa11.35□□□□□ -0.59
CHRNA1-201ENST00000261007 ZCCHC9Q8N567 271 aaKnown RBP11.35□□□□□ -0.59
CHRNA1-201ENST00000261007 UCMAQ8WVF2 138 aa11.35□□□□□ -0.59
CHRNA1-201ENST00000261007 PTPRN2Q92932 1015 aa11.35□□□□□ -0.59
CHRNA1-201ENST00000261007 CADM1Q9BY67 442 aaKnown RBP11.35□□□□□ -0.59
CHRNA1-201ENST00000261007 CHST7Q9NS84 486 aa11.35□□□□□ -0.59
CHRNA1-201ENST00000261007 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.35□□□□□ -0.59
CHRNA1-201ENST00000261007 DNAJC25-GNG10A0A024R161 153 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 ASB14A6NK59 587 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 A8MXQ7 604 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 GSC2O15499 205 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 DNAJC6O75061 913 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 TOM1L1O75674 476 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 CNMDO75829 334 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 PSMG1O95456 288 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 TROVE2P10155 538 aaKnown RBP eCLIP11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 SH3BGRP55822 239 aaPredicted RBP11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 POLE2P56282 527 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 NLRP11P59045 1033 aaKnown RBP11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 PTP4A2Q12974 167 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 CAPSQ13938 189 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 TFDP1Q14186 410 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 CCNG2Q16589 344 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 CELF3Q5SZQ8 465 aaKnown RBP11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 DAB2IPQ5VWQ8 1189 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 WDR49Q8IV35 697 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 BRSK2Q8IWQ3 736 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 ZNF526Q8TF50 670 aaPredicted RBP11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 NCSTNQ92542 709 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 AZIN2Q96A70 460 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 CDCA5Q96FF9 252 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 VCPIP1Q96JH7 1222 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 MMP19Q99542 508 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 MIPEPQ99797 713 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 SLCO1B3Q9NPD5 702 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 CNTN6Q9UQ52 1028 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 TELO2Q9Y4R8 837 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 EXOC1LA0A1B0GW35 172 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 MAP3K7O43318 606 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 GCAP28676 217 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 CUL2Q13617 745 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 KRT72Q14CN4 511 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 RCN1Q15293 331 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 MAPK6Q16659 721 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 LIN9Q5TKA1 542 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 HHATQ5VTY9 493 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 TDRD10Q5VZ19 366 aaKnown RBP11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 IZUMO3Q5VZ72 239 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 ZNF365Q70YC5 407 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 OTOAQ7RTW8 1153 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 NRG4Q8WWG1 115 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 ZNF516Q92618 1163 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 ZNF75CPQ92670 426 aaPredicted RBP11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 PTCD3Q96EY7 689 aaKnown RBP11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 NSL1Q96IY1 281 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 RBM41Q96IZ5 413 aaKnown RBP11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 GBP5Q96PP8 586 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 GPR20Q99678 358 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 EPAS1Q99814 870 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 TARS2Q9BW92 718 aaKnown RBP11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 VCX3BQ9H321 246 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 SMARCAD1Q9H4L7 1026 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 VCX3AQ9NNX9 186 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 ANKFY1Q9P2R3 1169 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 SLC24A2Q9UI40 661 aa11.34□□□□□ -0.59
CHRNA1-201ENST00000261007 IGKV6-21A0A0C4DH24 114 aa11.33□□□□□ -0.6
CHRNA1-201ENST00000261007 NDC80O14777 642 aa11.33□□□□□ -0.6
CHRNA1-201ENST00000261007 TYROBPO43914 113 aa11.33□□□□□ -0.6
CHRNA1-201ENST00000261007 GRIN3BO60391 1043 aa11.33□□□□□ -0.6
CHRNA1-201ENST00000261007 SPAG7O75391 227 aa11.33□□□□□ -0.6
CHRNA1-201ENST00000261007 UNGP13051 313 aaPredicted RBP11.33□□□□□ -0.6
CHRNA1-201ENST00000261007 NSFP46459 744 aaKnown RBP11.33□□□□□ -0.6
CHRNA1-201ENST00000261007 ACOT2P49753 483 aa11.33□□□□□ -0.6
CHRNA1-201ENST00000261007 FSTL1Q12841 308 aa11.33□□□□□ -0.6
CHRNA1-201ENST00000261007 TTLL12Q14166 644 aaPredicted RBP11.33□□□□□ -0.6
CHRNA1-201ENST00000261007 CCDC142Q17RM4 750 aa11.33□□□□□ -0.6
CHRNA1-201ENST00000261007 TBC1D25Q3MII6 688 aa11.33□□□□□ -0.6
CHRNA1-201ENST00000261007 FOXB2Q5VYV0 432 aa11.33□□□□□ -0.6
CHRNA1-201ENST00000261007 MTDHQ86UE4 582 aaKnown RBP11.33□□□□□ -0.6
CHRNA1-201ENST00000261007 ARHGAP24Q8N264 748 aa11.33□□□□□ -0.6
CHRNA1-201ENST00000261007 SMC1BQ8NDV3 1235 aa11.33□□□□□ -0.6
CHRNA1-201ENST00000261007 B4GALNT2Q8NHY0 566 aa11.33□□□□□ -0.6
CHRNA1-201ENST00000261007 FAM81AQ8TBF8 368 aa11.33□□□□□ -0.6
CHRNA1-201ENST00000261007 SPOCK2Q92563 424 aa11.33□□□□□ -0.6
CHRNA1-201ENST00000261007 C9orf72Q96LT7 481 aa11.33□□□□□ -0.6
CHRNA1-201ENST00000261007 RBM15Q96T37 977 aaKnown RBP eCLIP11.33□□□□□ -0.6
CHRNA1-201ENST00000261007 MRPL47Q9HD33 250 aaKnown RBP11.33□□□□□ -0.6
CHRNA1-201ENST00000261007 PCMTD2Q9NV79 361 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms