RNA–Protein interactions for RNA: ENST00000259003.14

CSHL1-201, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-201ENST00000259003 K7EQS6 105 aa13.59□□□□□ -0.23
CSHL1-201ENST00000259003 CDX4O14627 284 aaPredicted RBP13.59□□□□□ -0.23
CSHL1-201ENST00000259003 FOXD2O60548 495 aaPredicted RBP13.59□□□□□ -0.23
CSHL1-201ENST00000259003 AKAP3O75969 853 aa13.59□□□□□ -0.23
CSHL1-201ENST00000259003 APBB3O95704 486 aa13.59□□□□□ -0.23
CSHL1-201ENST00000259003 CHRM1P11229 460 aaPredicted RBP13.59□□□□□ -0.23
CSHL1-201ENST00000259003 DDX6P26196 483 aaKnown RBP eCLIP13.59□□□□□ -0.23
CSHL1-201ENST00000259003 GBP1P32455 592 aa13.59□□□□□ -0.23
CSHL1-201ENST00000259003 SLC6A11P48066 632 aa13.59□□□□□ -0.23
CSHL1-201ENST00000259003 NOVA1P51513 510 aaKnown RBP13.59□□□□□ -0.23
CSHL1-201ENST00000259003 PSMC1P62191 440 aaKnown RBP13.59□□□□□ -0.23
CSHL1-201ENST00000259003 FOXC1Q12948 553 aa13.59□□□□□ -0.23
CSHL1-201ENST00000259003 ZNF268Q14587 947 aaPredicted RBP13.59□□□□□ -0.23
CSHL1-201ENST00000259003 PDGFRLQ15198 375 aa13.59□□□□□ -0.23
CSHL1-201ENST00000259003 PTPAQ15257 358 aa13.59□□□□□ -0.23
CSHL1-201ENST00000259003 SF3A1Q15459 793 aaKnown RBP13.59□□□□□ -0.23
CSHL1-201ENST00000259003 TMEM92Q6UXU6 159 aa13.59□□□□□ -0.23
CSHL1-201ENST00000259003 KCTD17Q8N5Z5 321 aa13.59□□□□□ -0.23
CSHL1-201ENST00000259003 USP33Q8TEY7 942 aa13.59□□□□□ -0.23
CSHL1-201ENST00000259003 RLN3Q8WXF3 142 aa13.59□□□□□ -0.23
CSHL1-201ENST00000259003 DNAJC19Q96DA6 116 aa13.59□□□□□ -0.23
CSHL1-201ENST00000259003 AK8Q96MA6 479 aa13.59□□□□□ -0.23
CSHL1-201ENST00000259003 CBWD1Q9BRT8 395 aa13.59□□□□□ -0.23
CSHL1-201ENST00000259003 TMEM121BQ9BXQ6 578 aaPredicted RBP13.59□□□□□ -0.23
CSHL1-201ENST00000259003 ST6GALNAC4Q9H4F1 302 aa13.59□□□□□ -0.23
CSHL1-201ENST00000259003 PCIF1Q9H4Z3 704 aa13.59□□□□□ -0.23
CSHL1-201ENST00000259003 PDE11AQ9HCR9 933 aa13.59□□□□□ -0.23
CSHL1-201ENST00000259003 GOLGA4Q13439 2230 aaKnown RBP13.58□□□□□ -0.24
CSHL1-201ENST00000259003 CKMP06732 381 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 PROS1P07225 676 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 PAX3P23760 479 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 DDIT3P35638 169 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 IFNAR2P48551 515 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 IRX4P78413 519 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 TSPY1Q01534 308 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 SMARCB1Q12824 385 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 SOWAHAQ2M3V2 549 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 SH3PXD2AQ5TCZ1 1133 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 EMC10Q5UCC4 262 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 SLFN12LQ6IEE8 588 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 ANO7Q6IWH7 933 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 C12orf40Q86WS4 652 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 TTC30AQ86WT1 665 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 BRSK2Q8IWQ3 736 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 CPA6Q8N4T0 437 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 CSGALNACT2Q8N6G5 542 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 GLIS3Q8NEA6 775 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 MDGA1Q8NFP4 955 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 OR5B17Q8NGF7 314 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 RASSF8Q8NHQ8 419 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 NOC3LQ8WTT2 800 aaKnown RBP13.58□□□□□ -0.24
CSHL1-201ENST00000259003 LEO1Q8WVC0 666 aaPredicted RBP13.58□□□□□ -0.24
CSHL1-201ENST00000259003 TRMT2BQ96GJ1 504 aaKnown RBP13.58□□□□□ -0.24
CSHL1-201ENST00000259003 MYRFLQ96LU7 910 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 CLIC6Q96NY7 704 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 ACBD6Q9BR61 282 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 MTMR12Q9C0I1 747 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 RNF38Q9H0F5 515 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 CRTAC1Q9NQ79 661 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 FSCN3Q9NQT6 498 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 TMEM30AQ9NV96 361 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 EBF1Q9UH73 591 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 ZMIZ1Q9ULJ6 1067 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 SNX9Q9Y5X1 595 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 CLIC4Q9Y696 253 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 PCDH15Q96QU1 1955 aa13.58□□□□□ -0.24
CSHL1-201ENST00000259003 NUMA1Q14980 2115 aa13.57□□□□□ -0.24
CSHL1-201ENST00000259003 TRAV19A0A0A6YYK7 116 aa13.57□□□□□ -0.24
CSHL1-201ENST00000259003 GABRDO14764 452 aa13.57□□□□□ -0.24
CSHL1-201ENST00000259003 IL18RAPO95256 599 aa13.57□□□□□ -0.24
CSHL1-201ENST00000259003 NEFLP07196 543 aa13.57□□□□□ -0.24
CSHL1-201ENST00000259003 KRT19P08727 400 aa13.57□□□□□ -0.24
CSHL1-201ENST00000259003 USP17L7P0C7H9 530 aa13.57□□□□□ -0.24
CSHL1-201ENST00000259003 CACNA2D1P54289 1103 aa13.57□□□□□ -0.24
CSHL1-201ENST00000259003 ZNF252P-AS1Q0IIN9 211 aa13.57□□□□□ -0.24
CSHL1-201ENST00000259003 NFE2Q16621 373 aaPredicted RBP13.57□□□□□ -0.24
CSHL1-201ENST00000259003 PMS2CLQ68D20 193 aa13.57□□□□□ -0.24
CSHL1-201ENST00000259003 FAM173BQ6P4H8 233 aa13.57□□□□□ -0.24
CSHL1-201ENST00000259003 ARMCX6Q7L4S7 300 aa13.57□□□□□ -0.24
CSHL1-201ENST00000259003 ADGRF2Q8IZF7 708 aa13.57□□□□□ -0.24
CSHL1-201ENST00000259003 TSTD1Q8NFU3 115 aa13.57□□□□□ -0.24
CSHL1-201ENST00000259003 KBTBD7Q8WVZ9 684 aa13.57□□□□□ -0.24
CSHL1-201ENST00000259003 HPS3Q969F9 1004 aa13.57□□□□□ -0.24
CSHL1-201ENST00000259003 ZNF560Q96MR9 790 aa13.57□□□□□ -0.24
CSHL1-201ENST00000259003 MRPL44Q9H9J2 332 aaKnown RBP13.57□□□□□ -0.24
CSHL1-201ENST00000259003 CABIN1Q9Y6J0 2220 aa13.57□□□□□ -0.24
CSHL1-201ENST00000259003 ANKRD11Q6UB99 2663 aaPredicted RBP13.56□□□□□ -0.24
CSHL1-201ENST00000259003 A0A087X0B3 334 aa13.56□□□□□ -0.24
CSHL1-201ENST00000259003 SLC26A4O43511 780 aa13.56□□□□□ -0.24
CSHL1-201ENST00000259003 HUS1O60921 280 aa13.56□□□□□ -0.24
CSHL1-201ENST00000259003 RHOBTB1O94844 696 aa13.56□□□□□ -0.24
CSHL1-201ENST00000259003 PRPF6O94906 941 aaKnown RBP13.56□□□□□ -0.24
CSHL1-201ENST00000259003 CYP17A1P05093 508 aa13.56□□□□□ -0.24
CSHL1-201ENST00000259003 PDGFRBP09619 1106 aa13.56□□□□□ -0.24
CSHL1-201ENST00000259003 HDCP19113 662 aa13.56□□□□□ -0.24
CSHL1-201ENST00000259003 BDNFP23560 247 aa13.56□□□□□ -0.24
CSHL1-201ENST00000259003 LONP1P36776 959 aaKnown RBP13.56□□□□□ -0.24
CSHL1-201ENST00000259003 RPL10AP62906 217 aaKnown RBP13.56□□□□□ -0.24
CSHL1-201ENST00000259003 ELF2Q15723 593 aa13.56□□□□□ -0.24
CSHL1-201ENST00000259003 UAP1L1Q3KQV9 507 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms