RNA–Protein interactions for RNA: ENST00000258387.5

PAX3-201, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-201ENST00000258387 CCDC6Q16204 474 aa20.02■□□□□ 0.8
PAX3-201ENST00000258387 FOXD4L5Q5VV16 416 aaPredicted RBP20.02■□□□□ 0.8
PAX3-201ENST00000258387 C4orf50Q6ZRC1 276 aa20.02■□□□□ 0.8
PAX3-201ENST00000258387 PRR23CQ6ZRP0 262 aa20.02■□□□□ 0.8
PAX3-201ENST00000258387 DPH6Q7L8W6 267 aa20.02■□□□□ 0.8
PAX3-201ENST00000258387 CPA6Q8N4T0 437 aa20.02■□□□□ 0.8
PAX3-201ENST00000258387 FSIP1Q8NA03 581 aa20.02■□□□□ 0.8
PAX3-201ENST00000258387 FOXD4L4Q8WXT5 416 aaPredicted RBP20.02■□□□□ 0.8
PAX3-201ENST00000258387 MYLPFQ96A32 169 aa20.02■□□□□ 0.8
PAX3-201ENST00000258387 FUBP3Q96I24 572 aaKnown RBP eCLIP20.02■□□□□ 0.8
PAX3-201ENST00000258387 TNMDQ9H2S6 317 aa20.02■□□□□ 0.8
PAX3-201ENST00000258387 CRTAC1Q9NQ79 661 aa20.02■□□□□ 0.8
PAX3-201ENST00000258387 KBTBD4Q9NVX7 518 aa20.02■□□□□ 0.8
PAX3-201ENST00000258387 CDH9Q9ULB4 789 aa20.02■□□□□ 0.8
PAX3-201ENST00000258387 TCHHQ07283 1943 aa20.02■□□□□ 0.79
PAX3-201ENST00000258387 SPTBN2O15020 2390 aa20.01■□□□□ 0.79
PAX3-201ENST00000258387 RPP40O75818 363 aaKnown RBP20.01■□□□□ 0.79
PAX3-201ENST00000258387 CST3P01034 146 aaPredicted RBP20.01■□□□□ 0.79
PAX3-201ENST00000258387 DLATP10515 647 aaKnown RBP20.01■□□□□ 0.79
PAX3-201ENST00000258387 HDCP19113 662 aa20.01■□□□□ 0.79
PAX3-201ENST00000258387 DRD1P21728 446 aa20.01■□□□□ 0.79
PAX3-201ENST00000258387 IFNAR2P48551 515 aa20.01■□□□□ 0.79
PAX3-201ENST00000258387 AMPD3Q01432 767 aa20.01■□□□□ 0.79
PAX3-201ENST00000258387 PSMD2Q13200 908 aa20.01■□□□□ 0.79
PAX3-201ENST00000258387 E2F4Q16254 413 aa20.01■□□□□ 0.79
PAX3-201ENST00000258387 TRAPPC11Q7Z392 1133 aa20.01■□□□□ 0.79
PAX3-201ENST00000258387 NETO1Q8TDF5 533 aa20.01■□□□□ 0.79
PAX3-201ENST00000258387 SH3RF2Q8TEC5 729 aa20.01■□□□□ 0.79
PAX3-201ENST00000258387 OSCP1Q8WVF1 389 aa20.01■□□□□ 0.79
PAX3-201ENST00000258387 GAB3Q8WWW8 586 aa20.01■□□□□ 0.79
PAX3-201ENST00000258387 CCDC127Q96BQ5 260 aa20.01■□□□□ 0.79
PAX3-201ENST00000258387 ZNF396Q96N95 335 aaPredicted RBP20.01■□□□□ 0.79
PAX3-201ENST00000258387 TRIM9Q9C026 710 aa20.01■□□□□ 0.79
PAX3-201ENST00000258387 ARRDC1-AS1Q9H2J1 176 aa20.01■□□□□ 0.79
PAX3-201ENST00000258387 LINC00597Q9H2U6 94 aa20.01■□□□□ 0.79
PAX3-201ENST00000258387 KIAA1586Q9HCI6 787 aa20.01■□□□□ 0.79
PAX3-201ENST00000258387 NUP210Q8TEM1 1887 aaPredicted RBP20.01■□□□□ 0.79
PAX3-201ENST00000258387 CLIC2O15247 247 aa20■□□□□ 0.79
PAX3-201ENST00000258387 CCDC192P0DO97 292 aa20■□□□□ 0.79
PAX3-201ENST00000258387 TNNI1P19237 187 aa20■□□□□ 0.79
PAX3-201ENST00000258387 GNL1P36915 607 aaPredicted RBP20■□□□□ 0.79
PAX3-201ENST00000258387 MAGEA11P43364 429 aa20■□□□□ 0.79
PAX3-201ENST00000258387 CYP2J2P51589 502 aa20■□□□□ 0.79
PAX3-201ENST00000258387 KCNB1Q14721 858 aa20■□□□□ 0.79
PAX3-201ENST00000258387 ZNF77Q15935 545 aa20■□□□□ 0.79
PAX3-201ENST00000258387 FOXD4L6Q3SYB3 417 aaPredicted RBP20■□□□□ 0.79
PAX3-201ENST00000258387 FOXD4L3Q6VB84 417 aaPredicted RBP20■□□□□ 0.79
PAX3-201ENST00000258387 CACNA2D4Q7Z3S7 1137 aa20■□□□□ 0.79
PAX3-201ENST00000258387 LIMS2Q7Z4I7 341 aa20■□□□□ 0.79
PAX3-201ENST00000258387 KBTBD6Q86V97 674 aa20■□□□□ 0.79
PAX3-201ENST00000258387 WDR49Q8IV35 697 aa20■□□□□ 0.79
PAX3-201ENST00000258387 NELFCDQ8IXH7 590 aa20■□□□□ 0.79
PAX3-201ENST00000258387 ZNF507Q8TCN5 953 aa20■□□□□ 0.79
PAX3-201ENST00000258387 EXOC4Q96A65 974 aa20■□□□□ 0.79
PAX3-201ENST00000258387 HHIPQ96QV1 700 aa20■□□□□ 0.79
PAX3-201ENST00000258387 MRPL45Q9BRJ2 306 aaKnown RBP20■□□□□ 0.79
PAX3-201ENST00000258387 SNX25Q9H3E2 840 aa20■□□□□ 0.79
PAX3-201ENST00000258387 GCNT4Q9P109 453 aa20■□□□□ 0.79
PAX3-201ENST00000258387 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.99■□□□□ 0.79
PAX3-201ENST00000258387 K7ELQ4 463 aaPredicted RBP19.99■□□□□ 0.79
PAX3-201ENST00000258387 SLC30A4O14863 429 aa19.99■□□□□ 0.79
PAX3-201ENST00000258387 PPP6R2O75170 966 aa19.99■□□□□ 0.79
PAX3-201ENST00000258387 KCNA4P22459 653 aa19.99■□□□□ 0.79
PAX3-201ENST00000258387 WARSP23381 471 aaKnown RBP19.99■□□□□ 0.79
PAX3-201ENST00000258387 ANXA13P27216 316 aa19.99■□□□□ 0.79
PAX3-201ENST00000258387 USP46P62068 366 aa19.99■□□□□ 0.79
PAX3-201ENST00000258387 MAPRE1Q15691 268 aaKnown RBP19.99■□□□□ 0.79
PAX3-201ENST00000258387 SNRNP35Q16560 246 aaKnown RBP19.99■□□□□ 0.79
PAX3-201ENST00000258387 MDH1BQ5I0G3 518 aa19.99■□□□□ 0.79
PAX3-201ENST00000258387 HS2ST1Q7LGA3 356 aa19.99■□□□□ 0.79
PAX3-201ENST00000258387 IQUBQ8NA54 791 aa19.99■□□□□ 0.79
PAX3-201ENST00000258387 OR6B3Q8NGW1 331 aa19.99■□□□□ 0.79
PAX3-201ENST00000258387 RPLP0P6Q8NHW5 317 aa19.99■□□□□ 0.79
PAX3-201ENST00000258387 CD101Q93033 1021 aa19.99■□□□□ 0.79
PAX3-201ENST00000258387 ATP2A3Q93084 1043 aa19.99■□□□□ 0.79
PAX3-201ENST00000258387 SPATA17Q96L03 361 aa19.99■□□□□ 0.79
PAX3-201ENST00000258387 FNBP1Q96RU3 617 aa19.99■□□□□ 0.79
PAX3-201ENST00000258387 CUEDC2Q9H467 287 aa19.99■□□□□ 0.79
PAX3-201ENST00000258387 AGPAT3Q9NRZ7 376 aa19.99■□□□□ 0.79
PAX3-201ENST00000258387 SDK1Q7Z5N4 2213 aa19.98■□□□□ 0.79
PAX3-201ENST00000258387 EIF3DO15371 548 aaKnown RBP eCLIP19.98■□□□□ 0.79
PAX3-201ENST00000258387 TGFB1I1O43294 461 aa19.98■□□□□ 0.79
PAX3-201ENST00000258387 ABL1P00519 1130 aa19.98■□□□□ 0.79
PAX3-201ENST00000258387 CASP1P29466 404 aa19.98■□□□□ 0.79
PAX3-201ENST00000258387 NR1H3Q13133 447 aa19.98■□□□□ 0.79
PAX3-201ENST00000258387 SF3A2Q15428 464 aaKnown RBP19.98■□□□□ 0.79
PAX3-201ENST00000258387 EML3Q32P44 896 aa19.98■□□□□ 0.79
PAX3-201ENST00000258387 FAM26FQ5R3K3 315 aa19.98■□□□□ 0.79
PAX3-201ENST00000258387 SHC4Q6S5L8 630 aa19.98■□□□□ 0.79
PAX3-201ENST00000258387 VSTM1Q6UX27 236 aa19.98■□□□□ 0.79
PAX3-201ENST00000258387 EPM2AIP1Q7L775 607 aaPredicted RBP19.98■□□□□ 0.79
PAX3-201ENST00000258387 MYCBPAPQ8TBZ2 947 aa19.98■□□□□ 0.79
PAX3-201ENST00000258387 PCED1BQ96HM7 432 aa19.98■□□□□ 0.79
PAX3-201ENST00000258387 CNTNAP3BQ96NU0 1288 aa19.98■□□□□ 0.79
PAX3-201ENST00000258387 CNTNAP3Q9BZ76 1288 aa19.98■□□□□ 0.79
PAX3-201ENST00000258387 BLZF1Q9H2G9 400 aa19.98■□□□□ 0.79
PAX3-201ENST00000258387 TRPM5Q9NZQ8 1165 aa19.98■□□□□ 0.79
PAX3-201ENST00000258387 CCDC163A0A0D9SF12 145 aa19.97■□□□□ 0.79
PAX3-201ENST00000258387 CUTAO60888 179 aa19.97■□□□□ 0.79
PAX3-201ENST00000258387 USP4Q13107 963 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms