RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 TAB1Q15750 504 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 TAF2Q6P1X5 1199 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 XRRA1Q6P2D8 792 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 CYP4Z1Q86W10 505 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 TTC30BQ8N4P2 665 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 TTLL6Q8N841 843 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 SLC10A4Q96EP9 437 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 CDK5RAP1Q96SZ6 601 aaKnown RBP4.98□□□□□ -1.61
RC3H1-201ENST00000258349 KCTD14Q9BQ13 255 aaPredicted RBP4.98□□□□□ -1.61
RC3H1-201ENST00000258349 GJB4Q9NTQ9 266 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 GGT7Q9UJ14 662 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 N4BP2Q86UW6 1770 aaPredicted RBP4.98□□□□□ -1.61
RC3H1-201ENST00000258349 ECM29Q5VYK3 1845 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 SLCO1B7G3V0H7 640 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 DPYSL4O14531 572 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 VPS4BO75351 444 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 ALDH1A1P00352 501 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 PGK2P07205 417 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 TALDO1P37837 337 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 TRIM25Q14258 630 aaKnown RBP4.98□□□□□ -1.61
RC3H1-201ENST00000258349 CLEC16AQ2KHT3 1053 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 RBM46Q8TBY0 533 aaKnown RBP4.98□□□□□ -1.61
RC3H1-201ENST00000258349 BTN2A2Q8WVV5 523 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 SRPK1Q96SB4 655 aaKnown RBP4.98□□□□□ -1.61
RC3H1-201ENST00000258349 GINS4Q9BRT9 223 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 NAT9Q9BTE0 207 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 SIK2Q9H0K1 926 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 MMADHCQ9H3L0 296 aaPredicted RBP4.98□□□□□ -1.61
RC3H1-201ENST00000258349 AGPAT5Q9NUQ2 364 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 STARD13Q9Y3M8 1113 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 TNFAIP8O95379 198 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 PRLRP16471 622 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 LTKP29376 864 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 BLVRAP53004 296 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 CNTN1Q12860 1018 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 SLC29A2Q14542 456 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 CIAPIN1Q6FI81 312 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 TDRD5Q8NAT2 981 aaKnown RBP4.98□□□□□ -1.61
RC3H1-201ENST00000258349 KLHL25Q9H0H3 589 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 LATS2Q9NRM7 1088 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 ASB14A6NK59 587 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 PP2D1A8MPX8 630 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 SERPINB5P36952 375 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 DDR2Q16832 855 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 GOLGA7BQ2TAP0 167 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 TKFCQ3LXA3 575 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 C11orf63Q6NUN7 778 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 SRBD1Q8N5C6 995 aaKnown RBP4.98□□□□□ -1.61
RC3H1-201ENST00000258349 FEZF2Q8TBJ5 459 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 ZSWIM1Q9BR11 485 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 EFCAB1Q9HAE3 211 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 TMBIM4Q9HC24 238 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 TRIM10Q9UDY6 481 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 PIKFYVEQ9Y2I7 2098 aa4.98□□□□□ -1.61
RC3H1-201ENST00000258349 HEATR9A2RTY3 570 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 IQCA1LA6NCM1 817 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 KPNA4O00629 521 aaPredicted RBP4.97□□□□□ -1.61
RC3H1-201ENST00000258349 ZBTB39O15060 712 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 DGKIO75912 1065 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 CYBBP04839 570 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 CCNG1P51959 295 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 CNGA2Q16280 664 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 GPR162Q16538 588 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 IKBIPQ70UQ0 350 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 RBBP8NLQ8NC74 664 aaPredicted RBP4.97□□□□□ -1.61
RC3H1-201ENST00000258349 APOL4Q9BPW4 351 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 PEAK1Q9H792 1746 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 FKBP6O75344 327 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 PCSK1P29120 753 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 EMC2Q15006 297 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 NAPEPLDQ6IQ20 393 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 MICU2Q8IYU8 434 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 SLC7A14Q8TBB6 771 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 DEPDC7Q96QD5 511 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 COMMD8Q9NX08 183 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 MBD2Q9UBB5 411 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 PHTF1Q9UMS5 762 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 TMEM94Q12767 1356 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 PRAMEF22A3QJZ6 481 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 IFNA14P01570 189 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 TCN1P20061 433 aaPredicted RBP4.97□□□□□ -1.61
RC3H1-201ENST00000258349 NR2C2P49116 596 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 MMRN1Q13201 1228 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 BFSP2Q13515 415 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 TRIQKQ629K1 86 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 PTRHD1Q6GMV3 140 aaKnown RBP4.97□□□□□ -1.61
RC3H1-201ENST00000258349 LRRC6Q86X45 466 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 INPP5DQ92835 1189 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 SMARCAD1Q9H4L7 1026 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 C17orf75Q9HAS0 396 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 CD248Q9HCU0 757 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 ATAD3AQ9NVI7 634 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 LSM7Q9UK45 103 aaKnown RBP4.97□□□□□ -1.61
RC3H1-201ENST00000258349 SLC39A10Q9ULF5 831 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 AAR2Q9Y312 384 aaKnown RBP4.97□□□□□ -1.61
RC3H1-201ENST00000258349 CEP170BQ9Y4F5 1589 aaPredicted RBP4.97□□□□□ -1.61
RC3H1-201ENST00000258349 TDP2O95551 362 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 LSM8O95777 96 aaKnown RBP4.97□□□□□ -1.61
RC3H1-201ENST00000258349 LRRC74AQ0VAA2 488 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 SMTNL2Q2TAL5 461 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms