RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 TPST1O60507 370 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 PROSCO94903 275 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 PHEXP78562 749 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 PDK3Q15120 406 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 PLEKHG4Q58EX7 1191 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 NRG4Q8WWG1 115 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 SEMA4DQ92854 862 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 CSRNP1Q96S65 589 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 HERPUD2Q9BSE4 406 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 LMCD1Q9NZU5 365 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 TAGLN3Q9UI15 199 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 SH3BP1Q9Y3L3 701 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 PCDHB2Q9Y5E7 798 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 NDC80O14777 642 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 DCXO43602 365 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 GLRA2P23416 452 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 NUDT2P50583 147 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 SESN2P58004 480 aaPredicted RBP12.87□□□□□ -0.35
USP30-201ENST00000257548 ESRRGP62508 458 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 MRPS22P82650 360 aaKnown RBP12.87□□□□□ -0.35
USP30-201ENST00000257548 RARS2Q5T160 578 aaKnown RBP12.87□□□□□ -0.35
USP30-201ENST00000257548 RAPH1Q70E73 1250 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 ITFG2Q969R8 447 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 VTI1AQ96AJ9 217 aa12.87□□□□□ -0.35
USP30-201ENST00000257548 DNAAF2Q9NVR5 837 aaKnown RBP12.87□□□□□ -0.35
USP30-201ENST00000257548 SCAF8Q9UPN6 1271 aaKnown RBP12.87□□□□□ -0.35
USP30-201ENST00000257548 CIITAP33076 1130 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 ARL1P40616 181 aaPredicted RBP12.86□□□□□ -0.35
USP30-201ENST00000257548 PSMC5P62195 406 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 ACVR2BQ13705 512 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 RALGPS1Q5JS13 557 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 LRRC8BQ6P9F7 803 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 DEPTORQ8TB45 409 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 THAP11Q96EK4 314 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 CCDC17Q96LX7 622 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 OCEL1Q9H607 264 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 KCNMB3Q9NPA1 279 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 PARVAQ9NVD7 372 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 BTBD7Q9P203 1132 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 IP6K2Q9UHH9 426 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 GIPC1O14908 333 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 KCNN4O15554 427 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 SRGAP2CP0DJJ0 459 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 SRGAP2BP0DMP2 458 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 AQP4P55087 323 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 CDH6P55285 790 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 TPD52P55327 224 aaPredicted RBP12.86□□□□□ -0.35
USP30-201ENST00000257548 OCRLQ01968 901 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 ANO4Q32M45 955 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 WDR78Q5VTH9 848 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 FAM196AQ6ZSG2 479 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 APLFQ8IW19 511 aaPredicted RBP12.86□□□□□ -0.35
USP30-201ENST00000257548 UNC45AQ9H3U1 944 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 DDX4Q9NQI0 724 aaKnown RBP12.86□□□□□ -0.35
USP30-201ENST00000257548 SOX13Q9UN79 622 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 NUP188Q5SRE5 1749 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 PKNOX1P55347 436 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 CCDC15Q0P6D6 951 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 LAYNQ6UX15 382 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 NLRX1Q86UT6 975 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 RCOR2Q8IZ40 523 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 FBXO27Q8NI29 283 aa12.86□□□□□ -0.35
USP30-201ENST00000257548 ZSCAN18Q8TBC5 510 aaPredicted RBP12.86□□□□□ -0.35
USP30-201ENST00000257548 ALKBH8Q96BT7 664 aaKnown RBP12.86□□□□□ -0.35
USP30-201ENST00000257548 TSPYL2Q9H2G4 693 aaPredicted RBP12.86□□□□□ -0.35
USP30-201ENST00000257548 GPR75-ASB3A0A0A6YYF3 556 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 LYPLA1O75608 230 aaPredicted RBP12.85□□□□□ -0.35
USP30-201ENST00000257548 GRAPQ13588 217 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 HPS6Q86YV9 775 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 PPIL6Q8IXY8 311 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 FEZF2Q8TBJ5 459 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 GRAPLQ8TC17 118 aaPredicted RBP12.85□□□□□ -0.35
USP30-201ENST00000257548 FBXO28Q9NVF7 368 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 SLC7A8Q9UHI5 535 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 GINS2Q9Y248 185 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 FRMPD4Q14CM0 1322 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 ZBBXA8MT70 800 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 MEIS2O14770 477 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 ADRB2P07550 413 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 SNRPAP09012 282 aaKnown RBP12.85□□□□□ -0.35
USP30-201ENST00000257548 FGFR3P22607 806 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 RPS6P62753 249 aaKnown RBP12.85□□□□□ -0.35
USP30-201ENST00000257548 MRPS9P82933 396 aaKnown RBP12.85□□□□□ -0.35
USP30-201ENST00000257548 FLOT2Q14254 428 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 CLEC16AQ2KHT3 1053 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 C1orf186Q6ZWK4 172 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 MRPL46Q9H2W6 279 aaKnown RBP12.85□□□□□ -0.35
USP30-201ENST00000257548 XAB2Q9HCS7 855 aaKnown RBP12.85□□□□□ -0.35
USP30-201ENST00000257548 GRID1Q9ULK0 1009 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 OAS1P00973 400 aaKnown RBP12.85□□□□□ -0.35
USP30-201ENST00000257548 HLA-DRAP01903 254 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 VCLP18206 1134 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 TYK2P29597 1187 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 YWHABP31946 246 aaKnown RBP12.85□□□□□ -0.35
USP30-201ENST00000257548 GTF2H1P32780 548 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 QARSP47897 775 aaKnown RBP12.85□□□□□ -0.35
USP30-201ENST00000257548 CDK7P50613 346 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 PSMC1P62191 440 aaKnown RBP12.85□□□□□ -0.35
USP30-201ENST00000257548 DLG1Q12959 904 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 CCNYQ8ND76 341 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms