RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 GRB10Q13322 594 aa14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 FEZF2Q8TBJ5 459 aa14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 INPP4AQ96PE3 977 aaPredicted RBP14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 NHSL1Q5SYE7 1610 aa14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 HMBSP08397 361 aa14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 ATP5C1P36542 298 aaKnown RBP14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 PFKPQ01813 784 aa14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 CACNA2D3Q8IZS8 1091 aa14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 CARNMT1Q8N4J0 409 aa14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 ATP11CQ8NB49 1132 aa14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 MRRFQ96E11 262 aaKnown RBP14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 CABS1Q96KC9 395 aa14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 MORC2Q9Y6X9 1032 aaPredicted RBP14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 ADGRA2Q96PE1 1338 aa14.01□□□□□ -0.17
PRPF38A-201ENST00000257181 PRKCZQ05513 592 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 MMEL1Q495T6 779 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 MTSS1LQ765P7 747 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 PHLDB2Q86SQ0 1253 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 GLYCTKQ8IVS8 523 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 HJURPQ8NCD3 748 aaPredicted RBP14□□□□□ -0.17
PRPF38A-201ENST00000257181 ABHD10Q9NUJ1 306 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 VPS28Q9UK41 221 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 HPS5Q9UPZ3 1129 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 MYOM1P52179 1685 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 FAM47E-STBD1D6RA91 191 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 PLA2G4AP47712 749 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 AIF1P55008 147 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 FASTKD1Q53R41 847 aaKnown RBP14□□□□□ -0.17
PRPF38A-201ENST00000257181 ANKRD40Q6AI12 368 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 VSTM1Q6UX27 236 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 ZNF507Q8TCN5 953 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 CCDC124Q96CT7 223 aaKnown RBP14□□□□□ -0.17
PRPF38A-201ENST00000257181 OTUB1Q96FW1 271 aaPredicted RBP14□□□□□ -0.17
PRPF38A-201ENST00000257181 NUF2Q9BZD4 464 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 ATP8B1O43520 1251 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 BBS9Q3SYG4 887 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 TMEM119Q4V9L6 283 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 MDH1BQ5I0G3 518 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 FOXR2Q6PJQ5 311 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 CPB2Q96IY4 423 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 RUSC1Q9BVN2 902 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 DDIT4Q9NX09 232 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 SLC37A4O43826 429 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 BMP10O95393 424 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 GZMAP12544 262 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 ACO1P21399 889 aaKnown RBP14□□□□□ -0.17
PRPF38A-201ENST00000257181 HTR7P34969 479 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 EIF3EP60228 445 aaKnown RBP14□□□□□ -0.17
PRPF38A-201ENST00000257181 RHOAP61586 193 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 SATB1Q01826 763 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 ZNF268Q14587 947 aaPredicted RBP14□□□□□ -0.17
PRPF38A-201ENST00000257181 PPP1R3FQ6ZSY5 799 aaPredicted RBP14□□□□□ -0.17
PRPF38A-201ENST00000257181 OTOP3Q7RTS5 596 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 RASSF3Q86WH2 238 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 PDE11AQ9HCR9 933 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 BTBD7Q9P203 1132 aa14□□□□□ -0.17
PRPF38A-201ENST00000257181 MED24O75448 989 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 STIP1P31948 543 aaKnown RBP13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 GRK3P35626 688 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 ATP11AP98196 1134 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 TPGS2Q68CL5 300 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 CFAP36Q96G28 342 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 NFKBIZQ9BYH8 718 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 SMARCAL1Q9NZC9 954 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 EPS15L1Q9UBC2 864 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 ST3GAL5Q9UNP4 418 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 PTENP60484 403 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 GCNT1Q02742 428 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 HPS3Q969F9 1004 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 MTBPQ96DY7 904 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 C2orf49Q9BVC5 232 aaPredicted RBP13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 VCX3AQ9NNX9 186 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 MED4Q9NPJ6 270 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 CRLS1Q9UJA2 301 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 GTF3C4Q9UKN8 822 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 CASTOR2A6NHX0 329 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 STX7O15400 261 aaKnown RBP13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 CCL23P55773 120 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 SNX1Q13596 522 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 ACAD10Q6JQN1 1059 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 VSIG1Q86XK7 387 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 FAM71BQ8TC56 605 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 RAPGEF5Q92565 580 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 SNF8Q96H20 258 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 LRGUKQ96M69 825 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 NAT9Q9BTE0 207 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 XAB2Q9HCS7 855 aaKnown RBP13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 PDGFCQ9NRA1 345 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 SENP1Q9P0U3 644 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 PP2D1A8MPX8 630 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 VPS41P49754 854 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 C21orf59P57076 290 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 TWF1Q12792 350 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 TSNAXIP1Q2TAA8 658 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 FNDC3BQ53EP0 1204 aaKnown RBP13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 ZDHHC20Q5W0Z9 365 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 SLFN11Q7Z7L1 901 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 TBC1D1Q86TI0 1168 aaPredicted RBP13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 HSFY1Q96LI6 401 aa13.99□□□□□ -0.17
PRPF38A-201ENST00000257181 EFHD1Q9BUP0 239 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 202 ms