RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 AKAP10O43572 662 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 PDK2Q15119 407 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 UNC45BQ8IWX7 931 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 TC2NQ8N9U0 490 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 BHMTQ93088 406 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 CDK5RAP1Q96SZ6 601 aaKnown RBP9.05□□□□□ -0.96
PTCD3-201ENST00000254630 MTG1Q9BT17 334 aaPredicted RBP9.05□□□□□ -0.96
PTCD3-201ENST00000254630 CELF4Q9BZC1 486 aaKnown RBP9.05□□□□□ -0.96
PTCD3-201ENST00000254630 ROPN1BQ9BZX4 212 aaPredicted RBP9.05□□□□□ -0.96
PTCD3-201ENST00000254630 STN1Q9H668 368 aaKnown RBP9.05□□□□□ -0.96
PTCD3-201ENST00000254630 ROPN1Q9HAT0 212 aaPredicted RBP9.05□□□□□ -0.96
PTCD3-201ENST00000254630 DDIT4Q9NX09 232 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 ATP11BQ9Y2G3 1177 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 KLHL2O95198 593 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 ENO3P13929 434 aaPredicted RBP9.05□□□□□ -0.96
PTCD3-201ENST00000254630 SERPINB4P48594 390 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 BCAT1P54687 386 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 POU4F1Q01851 419 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 LAMTOR4Q0VGL1 99 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 GIT2Q14161 759 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 TERF2Q15554 542 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 LY6KQ17RY6 165 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 SLFN11Q7Z7L1 901 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 OLFM3Q96PB7 478 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 MANSC1Q9H8J5 431 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 ITGA11Q9UKX5 1188 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 MTO1Q9Y2Z2 717 aaKnown RBP9.05□□□□□ -0.96
PTCD3-201ENST00000254630 ARHGAP23Q9P227 1491 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 FBXO21O94952 628 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 NPTX2P47972 431 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 CYP24A1Q07973 514 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 TP53BP2Q13625 1128 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 TMEM132BQ14DG7 1078 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 STAMBPL1Q96FJ0 436 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 TMEM169Q96HH4 297 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 STARD7Q9NQZ5 370 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 GID8Q9NWU2 228 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 CHORDC1Q9UHD1 332 aaPredicted RBP9.05□□□□□ -0.96
PTCD3-201ENST00000254630 SLC39A10Q9ULF5 831 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 SOAT2O75908 522 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 SERPINB8P50452 374 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 BLOC1S5Q8TDH9 187 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 CYGBQ8WWM9 190 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 PKD2L2Q9NZM6 624 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 MARCOQ9UEW3 520 aaPredicted RBP9.04□□□□□ -0.96
PTCD3-201ENST00000254630 TRPC5OSA6NMA1 111 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 CENPAP49450 140 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 GRIN1Q05586 938 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 BTKQ06187 659 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 GRIK4Q16099 956 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 PRUNE1Q86TP1 453 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 PRPF39Q86UA1 669 aaKnown RBP9.04□□□□□ -0.96
PTCD3-201ENST00000254630 ZNF669Q96BR6 464 aaPredicted RBP9.04□□□□□ -0.96
PTCD3-201ENST00000254630 HES6Q96HZ4 224 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 RPRD1AQ96P16 312 aaPredicted RBP9.04□□□□□ -0.96
PTCD3-201ENST00000254630 EMILIN2Q9BXX0 1053 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 ISCUQ9H1K1 167 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 CHST12Q9NRB3 414 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 GRID1Q9ULK0 1009 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 TMX2Q9Y320 296 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 CNTNAP2Q9UHC6 1331 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 GOLGA8TH3BQL2 631 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 THP07101 528 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 VIL1P09327 827 aaKnown RBP9.04□□□□□ -0.96
PTCD3-201ENST00000254630 VCLP18206 1134 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 GARTP22102 1010 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 EPHB2P29323 1055 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 MFSD4BQ5TF39 518 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 RAD9BQ6WBX8 426 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 ITIH5Q86UX2 942 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 PCYOX1LQ8NBM8 494 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 OR2W6PQ8NHA6 318 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 C9orf72Q96LT7 481 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 ZSWIM1Q9BR11 485 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 VIPAS39Q9H9C1 493 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.04□□□□□ -0.96
PTCD3-201ENST00000254630 RUVBL2Q9Y230 463 aaKnown RBP9.04□□□□□ -0.96
PTCD3-201ENST00000254630 PCDHB12Q9Y5F1 795 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 ALG6Q9Y672 507 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 PXDNQ92626 1479 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 SALL1Q9NSC2 1324 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 CASTOR2A6NHX0 329 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 RNASEH1O60930 286 aaKnown RBP9.04□□□□□ -0.96
PTCD3-201ENST00000254630 CDH2P19022 906 aaPredicted RBP9.04□□□□□ -0.96
PTCD3-201ENST00000254630 MFSD10Q14728 455 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 MRPS31Q92665 395 aaKnown RBP9.04□□□□□ -0.96
PTCD3-201ENST00000254630 VPS33BQ9H267 617 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 DSG3P32926 999 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 CHI3L1P36222 383 aaPredicted RBP9.04□□□□□ -0.96
PTCD3-201ENST00000254630 CASP4P49662 377 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 RPL10AP62906 217 aaKnown RBP9.04□□□□□ -0.96
PTCD3-201ENST00000254630 E4F1Q66K89 784 aaPredicted RBP9.04□□□□□ -0.96
PTCD3-201ENST00000254630 KRCC1Q9NPI7 259 aaPredicted RBP9.04□□□□□ -0.96
PTCD3-201ENST00000254630 KIAA1257Q9ULG3 409 aa9.04□□□□□ -0.96
PTCD3-201ENST00000254630 PRR23AA6NEV1 266 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 MLNP12872 115 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 DAB2P98082 770 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 NBPF12Q5TAG4 269 aaPredicted RBP9.03□□□□□ -0.96
PTCD3-201ENST00000254630 TXNRD3Q86VQ6 643 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 FAM172AQ8WUF8 416 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms