RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 A0A1W2PQJ5 194 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 STX7O15400 261 aaKnown RBP19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 LSP1P33241 339 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 GIT2Q14161 759 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 BACE1P56817 501 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 SLC13A5Q86YT5 568 aaPredicted RBP19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 ARID3BQ8IVW6 561 aaPredicted RBP19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 CYP2W1Q8TAV3 490 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 CHST12Q9NRB3 414 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 HEATR9A2RTY3 570 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 TRIM66O15016 1216 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 RGS4P49798 205 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 SLC9A5Q14940 896 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 MFSD4BQ5TF39 518 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 AGBL3Q8NEM8 1001 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 ZNF555Q8NEP9 628 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 FAM172AQ8WUF8 416 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 JADE3Q92613 823 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 ENTPD7Q9NQZ7 604 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 OGTO15294 1046 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 POMCP01189 267 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 TBC1D19Q8N5T2 526 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 SETD4Q9NVD3 440 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 SUPT20HL2P0C7V6 817 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 MYL6P60660 151 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 GALNTL6Q49A17 601 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 ADGRF2Q8IZF7 708 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 TMEM121Q9BTD3 319 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 MKNK1Q9BUB5 465 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 WWOXQ9NZC7 414 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 CAPN6Q9Y6Q1 641 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 CNTNAP4Q9C0A0 1308 aa19.41■□□□□ 0.7
SMARCC1-201ENST00000254480 HSD17B3P37058 310 aa19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 TAS1R2Q8TE23 839 aa19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 MAP3K14Q99558 947 aa19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 CXCL8P10145 99 aa19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 TARSP26639 723 aaKnown RBP19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 TRIP10Q15642 601 aa19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 CKMP06732 381 aa19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 AKAP5P24588 427 aa19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 PLOD1Q02809 727 aaPredicted RBP19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 TRADDQ15628 312 aa19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 CLTCQ00610 1675 aaKnown RBP19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 SUPT7LO94864 414 aa19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 CYP11B1P15538 503 aa19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 GTF2A2P52657 109 aa19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 PTPAQ15257 358 aa19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 C3orf67Q6ZVT6 689 aa19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 PLEKHH3Q7Z736 793 aa19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 ZNF229Q9UJW7 825 aa19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 AP3B1O00203 1094 aa19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 SERPINB5P36952 375 aa19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 GEMIN4P57678 1058 aaKnown RBP19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 NAPEPLDQ6IQ20 393 aa19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 LRIG3Q6UXM1 1119 aa19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 FBXO36Q8NEA4 188 aa19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 KRT35Q92764 455 aa19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 GRID1Q9ULK0 1009 aa19.4■□□□□ 0.7
SMARCC1-201ENST00000254480 ENGASEQ8NFI3 743 aa19.39■□□□□ 0.7
SMARCC1-201ENST00000254480 TRAPPC12Q8WVT3 735 aa19.39■□□□□ 0.7
SMARCC1-201ENST00000254480 VPS50Q96JG6 964 aa19.39■□□□□ 0.7
SMARCC1-201ENST00000254480 ZSWIM1Q9BR11 485 aa19.39■□□□□ 0.7
SMARCC1-201ENST00000254480 RTFDC1Q9BY42 306 aaPredicted RBP19.39■□□□□ 0.7
SMARCC1-201ENST00000254480 ISCUQ9H1K1 167 aa19.39■□□□□ 0.7
SMARCC1-201ENST00000254480 RAD18Q9NS91 495 aa19.39■□□□□ 0.7
SMARCC1-201ENST00000254480 IARS2Q9NSE4 1012 aaKnown RBP19.39■□□□□ 0.7
SMARCC1-201ENST00000254480 SDE2Q6IQ49 451 aa19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 MPZL3Q6UWV2 235 aa19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 TRPM8Q7Z2W7 1104 aa19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 SLC25A13Q9UJS0 675 aa19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 RUVBL2Q9Y230 463 aaKnown RBP19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 CD163L1Q9NR16 1453 aa19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 RPS12P25398 132 aaKnown RBP19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 SREBF2Q12772 1141 aa19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 ATP6V0D2Q8N8Y2 350 aa19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 OPTNQ96CV9 577 aa19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 PXMP2Q9NR77 195 aa19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 XPO1O14980 1071 aaKnown RBP19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 RRM1P23921 792 aa19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 ACAT1P24752 427 aaKnown RBP19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 C11orf63Q6NUN7 778 aa19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 CALML6Q8TD86 181 aa19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 EDEM1Q92611 657 aa19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 PTPRHQ9HD43 1115 aa19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 DDNO94850 711 aaPredicted RBP19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 UBTFL6P0CB48 400 aaPredicted RBP19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 RGS2P41220 211 aa19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 PPP4CP60510 307 aa19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 WASHC5Q12768 1159 aa19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 ICE2Q659A1 982 aa19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 KAZALD1Q96I82 304 aa19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 SNTG2Q9NY99 539 aa19.39■□□□□ 0.69
SMARCC1-201ENST00000254480 CLASP2O75122 1294 aaKnown RBP19.38■□□□□ 0.69
SMARCC1-201ENST00000254480 KCNK10P57789 538 aa19.38■□□□□ 0.69
SMARCC1-201ENST00000254480 OTUD4Q01804 1114 aaKnown RBP19.38■□□□□ 0.69
SMARCC1-201ENST00000254480 DTNAQ9Y4J8 743 aa19.38■□□□□ 0.69
SMARCC1-201ENST00000254480 CTXN3Q4LDR2 81 aa19.38■□□□□ 0.69
SMARCC1-201ENST00000254480 ZNF677Q86XU0 584 aa19.38■□□□□ 0.69
SMARCC1-201ENST00000254480 HES6Q96HZ4 224 aa19.38■□□□□ 0.69
SMARCC1-201ENST00000254480 ERGIC2Q96RQ1 377 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms