RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 ZDBF2Q9HCK1 2354 aa12.27□□□□□ -0.45
LIN28A-201ENST00000254231 GRXCR1A8MXD5 290 aa12.27□□□□□ -0.45
LIN28A-201ENST00000254231 TRDMT1O14717 391 aaKnown RBP12.27□□□□□ -0.45
LIN28A-201ENST00000254231 B4GALT3O60512 393 aa12.27□□□□□ -0.45
LIN28A-201ENST00000254231 TMEM253P0C7T8 217 aa12.27□□□□□ -0.45
LIN28A-201ENST00000254231 IRF1P10914 325 aa12.27□□□□□ -0.45
LIN28A-201ENST00000254231 C10orf76Q5T2E6 689 aa12.27□□□□□ -0.45
LIN28A-201ENST00000254231 RTN4RL1Q86UN2 441 aaPredicted RBP12.27□□□□□ -0.45
LIN28A-201ENST00000254231 OSTM1Q86WC4 334 aa12.27□□□□□ -0.45
LIN28A-201ENST00000254231 RFX6Q8HWS3 928 aa12.27□□□□□ -0.45
LIN28A-201ENST00000254231 RXFP2Q8WXD0 754 aa12.27□□□□□ -0.45
LIN28A-201ENST00000254231 MAK16Q9BXY0 300 aaKnown RBP12.27□□□□□ -0.45
LIN28A-201ENST00000254231 COQ4Q9Y3A0 265 aa12.27□□□□□ -0.45
LIN28A-201ENST00000254231 SNX10Q9Y5X0 201 aa12.27□□□□□ -0.45
LIN28A-201ENST00000254231 HAS3O00219 553 aa12.27□□□□□ -0.45
LIN28A-201ENST00000254231 SART1O43290 800 aaKnown RBP12.27□□□□□ -0.45
LIN28A-201ENST00000254231 ZRANB2O95218 330 aaKnown RBP eCLIP12.27□□□□□ -0.45
LIN28A-201ENST00000254231 MYBL2P10244 700 aa12.27□□□□□ -0.45
LIN28A-201ENST00000254231 NCAM1P13591 858 aa12.27□□□□□ -0.45
LIN28A-201ENST00000254231 CARSP49589 748 aaKnown RBP12.27□□□□□ -0.45
LIN28A-201ENST00000254231 SNRPFP62306 86 aaKnown RBP12.27□□□□□ -0.45
LIN28A-201ENST00000254231 OVOS1Q6IE37 1185 aa12.27□□□□□ -0.45
LIN28A-201ENST00000254231 CREG2Q8IUH2 290 aa12.27□□□□□ -0.45
LIN28A-201ENST00000254231 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.27□□□□□ -0.45
LIN28A-201ENST00000254231 SYN2Q92777 582 aaPredicted RBP12.27□□□□□ -0.45
LIN28A-201ENST00000254231 HSPA6P17066 643 aa12.26□□□□□ -0.45
LIN28A-201ENST00000254231 PRKCIP41743 596 aa12.26□□□□□ -0.45
LIN28A-201ENST00000254231 ALDH7A1P49419 539 aaKnown RBP12.26□□□□□ -0.45
LIN28A-201ENST00000254231 CDH6P55285 790 aa12.26□□□□□ -0.45
LIN28A-201ENST00000254231 MAMLD1Q13495 774 aa12.26□□□□□ -0.45
LIN28A-201ENST00000254231 RWDD4Q6NW29 188 aaKnown RBP12.26□□□□□ -0.45
LIN28A-201ENST00000254231 NT5DC3Q86UY8 548 aa12.26□□□□□ -0.45
LIN28A-201ENST00000254231 PIGZQ86VD9 579 aa12.26□□□□□ -0.45
LIN28A-201ENST00000254231 TMEM173Q86WV6 379 aaPredicted RBP12.26□□□□□ -0.45
LIN28A-201ENST00000254231 TTC9BQ8N6N2 239 aa12.26□□□□□ -0.45
LIN28A-201ENST00000254231 CCNYQ8ND76 341 aa12.26□□□□□ -0.45
LIN28A-201ENST00000254231 UBLCP1Q8WVY7 318 aaPredicted RBP12.26□□□□□ -0.45
LIN28A-201ENST00000254231 YME1L1Q96TA2 773 aa12.26□□□□□ -0.45
LIN28A-201ENST00000254231 ERVK-5Q9HDB9 667 aa12.26□□□□□ -0.45
LIN28A-201ENST00000254231 PGRMC1O00264 195 aaKnown RBP12.26□□□□□ -0.45
LIN28A-201ENST00000254231 HGSO14964 777 aaPredicted RBP12.26□□□□□ -0.45
LIN28A-201ENST00000254231 NBNO60934 754 aa12.26□□□□□ -0.45
LIN28A-201ENST00000254231 ZSCAN5DPP0CG00 497 aa12.26□□□□□ -0.45
LIN28A-201ENST00000254231 PROZP22891 400 aa12.26□□□□□ -0.45
LIN28A-201ENST00000254231 SLCO1A2P46721 670 aa12.26□□□□□ -0.45
LIN28A-201ENST00000254231 YWHAEP62258 255 aaKnown RBP12.26□□□□□ -0.45
LIN28A-201ENST00000254231 CKAP4Q07065 602 aaKnown RBP12.26□□□□□ -0.45
LIN28A-201ENST00000254231 TTC30AQ86WT1 665 aa12.26□□□□□ -0.45
LIN28A-201ENST00000254231 METTL23Q86XA0 190 aa12.26□□□□□ -0.45
LIN28A-201ENST00000254231 WDTC1Q8N5D0 677 aa12.26□□□□□ -0.45
LIN28A-201ENST00000254231 PXYLP1Q8TE99 480 aa12.26□□□□□ -0.45
LIN28A-201ENST00000254231 MUC3AQ02505 3323 aa12.26□□□□□ -0.45
LIN28A-201ENST00000254231 REV3LO60673 3130 aa12.26□□□□□ -0.45
LIN28A-201ENST00000254231 C9IYK1 514 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 KIAA0391O15091 583 aaKnown RBP12.25□□□□□ -0.45
LIN28A-201ENST00000254231 RAD51CO43502 376 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 MED7O43513 233 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 PIGRP01833 764 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 GLI1P08151 1106 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 ETS1P14921 441 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 TKTP29401 623 aaKnown RBP12.25□□□□□ -0.45
LIN28A-201ENST00000254231 ABCD1P33897 745 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 OGDHQ02218 1023 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 PDCLQ13371 301 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 ZC3H12AQ5D1E8 599 aaKnown RBP12.25□□□□□ -0.45
LIN28A-201ENST00000254231 FAM183BPQ6ZVS7 135 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 SYCE1Q8N0S2 351 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 SLC7A14Q8TBB6 771 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 SYT15Q9BQS2 421 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 FAM107BQ9H098 131 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 ITGA11Q9UKX5 1188 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 PCDHGC5Q9Y5F6 944 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 EFCAB8A8MWE9 144 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 CD4P01730 458 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 GJA1P17302 382 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 TKTL1P51854 596 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 C15orf39Q6ZRI6 1047 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 ENOSF1Q7L5Y1 443 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 RHOT2Q8IXI1 618 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 GOLGA6L1Q8N7Z2 621 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 B3GALNT2Q8NCR0 500 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 OR2W6PQ8NHA6 318 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 FEZF2Q8TBJ5 459 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 DDX1Q92499 740 aaKnown RBP12.25□□□□□ -0.45
LIN28A-201ENST00000254231 ZNF560Q96MR9 790 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.25□□□□□ -0.45
LIN28A-201ENST00000254231 PARVAQ9NVD7 372 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.25□□□□□ -0.45
LIN28A-201ENST00000254231 GOLGA6L10A0A0M3HER8 536 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 SGK1O00141 431 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 CILPO75339 1184 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 CACNA2D1P54289 1103 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 RWDD2BP57060 319 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 YWHAHQ04917 246 aaPredicted RBP12.25□□□□□ -0.45
LIN28A-201ENST00000254231 ADCY2Q08462 1091 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 NPNTQ6UXI9 565 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 HFE2Q6ZVN8 426 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 RAPGEF5Q92565 580 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 RUFY1Q96T51 708 aa12.25□□□□□ -0.45
LIN28A-201ENST00000254231 MRPL47Q9HD33 250 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms