RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 CDR1P51861 262 aa19.67■□□□□ 0.74
PDLIM4-201ENST00000253754 GPS1Q13098 491 aa19.67■□□□□ 0.74
PDLIM4-201ENST00000253754 TAF5Q15542 800 aa19.67■□□□□ 0.74
PDLIM4-201ENST00000253754 HEXIM2Q96MH2 286 aaKnown RBP19.67■□□□□ 0.74
PDLIM4-201ENST00000253754 ROPN1BQ9BZX4 212 aaPredicted RBP19.67■□□□□ 0.74
PDLIM4-201ENST00000253754 ROPN1Q9HAT0 212 aaPredicted RBP19.67■□□□□ 0.74
PDLIM4-201ENST00000253754 PLCB3Q01970 1234 aa19.67■□□□□ 0.74
PDLIM4-201ENST00000253754 POU5F1BQ06416 359 aa19.67■□□□□ 0.74
PDLIM4-201ENST00000253754 OASLQ15646 514 aaKnown RBP19.67■□□□□ 0.74
PDLIM4-201ENST00000253754 GRIK4Q16099 956 aa19.67■□□□□ 0.74
PDLIM4-201ENST00000253754 CROCCP2Q86T23 111 aa19.67■□□□□ 0.74
PDLIM4-201ENST00000253754 IFNLR1Q8IU57 520 aaPredicted RBP19.67■□□□□ 0.74
PDLIM4-201ENST00000253754 CYP4X1Q8N118 509 aa19.67■□□□□ 0.74
PDLIM4-201ENST00000253754 ARHGEF2Q92974 986 aaKnown RBP19.67■□□□□ 0.74
PDLIM4-201ENST00000253754 CENPTQ96BT3 561 aa19.67■□□□□ 0.74
PDLIM4-201ENST00000253754 CHMP6Q96FZ7 201 aa19.67■□□□□ 0.74
PDLIM4-201ENST00000253754 RBM15Q96T37 977 aaKnown RBP eCLIP19.67■□□□□ 0.74
PDLIM4-201ENST00000253754 INTS9Q9NV88 658 aaKnown RBP19.67■□□□□ 0.74
PDLIM4-201ENST00000253754 DDX56Q9NY93 547 aaKnown RBP19.67■□□□□ 0.74
PDLIM4-201ENST00000253754 TBK1Q9UHD2 729 aa19.67■□□□□ 0.74
PDLIM4-201ENST00000253754 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.67■□□□□ 0.74
PDLIM4-201ENST00000253754 IFNB1P01574 187 aa19.66■□□□□ 0.74
PDLIM4-201ENST00000253754 IGHA2P01877 340 aa19.66■□□□□ 0.74
PDLIM4-201ENST00000253754 CYP3A5P20815 502 aa19.66■□□□□ 0.74
PDLIM4-201ENST00000253754 FLT3LGP49771 235 aa19.66■□□□□ 0.74
PDLIM4-201ENST00000253754 VCPP55072 806 aaKnown RBP19.66■□□□□ 0.74
PDLIM4-201ENST00000253754 COPS2P61201 443 aa19.66■□□□□ 0.74
PDLIM4-201ENST00000253754 LRRC14Q15048 493 aa19.66■□□□□ 0.74
PDLIM4-201ENST00000253754 KIZQ2M2Z5 673 aa19.66■□□□□ 0.74
PDLIM4-201ENST00000253754 RAB6CQ53S08 254 aa19.66■□□□□ 0.74
PDLIM4-201ENST00000253754 CPLX4Q7Z7G2 160 aa19.66■□□□□ 0.74
PDLIM4-201ENST00000253754 TADA2BQ86TJ2 420 aa19.66■□□□□ 0.74
PDLIM4-201ENST00000253754 MGARPQ8TDB4 240 aa19.66■□□□□ 0.74
PDLIM4-201ENST00000253754 SEC16BQ96JE7 1060 aa19.66■□□□□ 0.74
PDLIM4-201ENST00000253754 RAB6CQ9H0N0 254 aa19.66■□□□□ 0.74
PDLIM4-201ENST00000253754 ASB7Q9H672 318 aa19.66■□□□□ 0.74
PDLIM4-201ENST00000253754 RNF19AQ9NV58 838 aa19.66■□□□□ 0.74
PDLIM4-201ENST00000253754 A0A087WUV0 522 aaPredicted RBP19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 TRPA1O75762 1119 aa19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 KIAA0754O94854 1291 aa19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 PTPN7P35236 360 aa19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 NDST1P52848 882 aa19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 FASTKD3Q14CZ7 662 aaKnown RBP19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 RNF187Q5TA31 235 aaPredicted RBP19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 ZCCHC9Q8N567 271 aaKnown RBP19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 BBOF1Q8ND07 529 aa19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 PIWIL1Q96J94 861 aaKnown RBP19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 SERPINB12Q96P63 405 aa19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 ZNF317Q96PQ6 595 aaPredicted RBP19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 TSPYL1Q9H0U9 437 aa19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 STMN4Q9H169 189 aaPredicted RBP19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 SETD4Q9NVD3 440 aa19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 COL1A2P08123 1366 aa19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 C5orf60A6NFR6 353 aa19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 DNALI1O14645 258 aaPredicted RBP19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 PECAM1P16284 738 aaPredicted RBP19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 GPD2P43304 727 aa19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 BEX3Q00994 111 aa19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 LMNB2Q03252 620 aa19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 CNGA2Q16280 664 aa19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 SH3PXD2AQ5TCZ1 1133 aa19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 DRICH1Q6PGQ1 229 aaPredicted RBP19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 MICALL1Q8N3F8 863 aa19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 C12orf29Q8N999 325 aa19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 AP5M1Q9H0R1 490 aa19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 MLXIPLQ9NP71 852 aa19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 SAYSD1Q9NPB0 183 aa19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 DPP3Q9NY33 737 aa19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 MKI67P46013 3256 aaKnown RBP19.65■□□□□ 0.74
PDLIM4-201ENST00000253754 SGK1O00141 431 aa19.64■□□□□ 0.74
PDLIM4-201ENST00000253754 MAGEA4P43358 317 aa19.64■□□□□ 0.74
PDLIM4-201ENST00000253754 GDF10P55107 478 aa19.64■□□□□ 0.74
PDLIM4-201ENST00000253754 C6orf89Q6UWU4 347 aa19.64■□□□□ 0.74
PDLIM4-201ENST00000253754 MICALCLQ6ZW33 695 aa19.64■□□□□ 0.74
PDLIM4-201ENST00000253754 POLNQ7Z5Q5 900 aa19.64■□□□□ 0.74
PDLIM4-201ENST00000253754 TAB3Q8N5C8 712 aaPredicted RBP19.64■□□□□ 0.74
PDLIM4-201ENST00000253754 OTUD6BQ8N6M0 293 aa19.64■□□□□ 0.74
PDLIM4-201ENST00000253754 KAT2BQ92831 832 aa19.64■□□□□ 0.74
PDLIM4-201ENST00000253754 KIF12Q96FN5 646 aa19.64■□□□□ 0.74
PDLIM4-201ENST00000253754 ACAP3Q96P50 834 aa19.64■□□□□ 0.74
PDLIM4-201ENST00000253754 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.64■□□□□ 0.74
PDLIM4-201ENST00000253754 PPEF2O14830 753 aa19.64■□□□□ 0.73
PDLIM4-201ENST00000253754 CST8O60676 142 aa19.64■□□□□ 0.73
PDLIM4-201ENST00000253754 ATICP31939 592 aa19.64■□□□□ 0.73
PDLIM4-201ENST00000253754 CAP1Q01518 475 aa19.64■□□□□ 0.73
PDLIM4-201ENST00000253754 OTUD4Q01804 1114 aaKnown RBP19.64■□□□□ 0.73
PDLIM4-201ENST00000253754 PRKCZQ05513 592 aa19.64■□□□□ 0.73
PDLIM4-201ENST00000253754 SLC20A2Q08357 652 aa19.64■□□□□ 0.73
PDLIM4-201ENST00000253754 ADCY1Q08828 1119 aa19.64■□□□□ 0.73
PDLIM4-201ENST00000253754 FAM182AQ5T1J6 154 aa19.64■□□□□ 0.73
PDLIM4-201ENST00000253754 FAM102AQ5T9C2 384 aaPredicted RBP19.64■□□□□ 0.73
PDLIM4-201ENST00000253754 VSTM1Q6UX27 236 aa19.64■□□□□ 0.73
PDLIM4-201ENST00000253754 TAOK1Q7L7X3 1001 aa19.64■□□□□ 0.73
PDLIM4-201ENST00000253754 SPATS2Q86XZ4 545 aaKnown RBP19.64■□□□□ 0.73
PDLIM4-201ENST00000253754 TRPV1Q8NER1 839 aa19.64■□□□□ 0.73
PDLIM4-201ENST00000253754 ACTL9Q8TC94 416 aa19.64■□□□□ 0.73
PDLIM4-201ENST00000253754 TRIB2Q92519 343 aa19.64■□□□□ 0.73
PDLIM4-201ENST00000253754 HSPH1Q92598 858 aa19.64■□□□□ 0.73
PDLIM4-201ENST00000253754 FAM49AQ9H0Q0 323 aaPredicted RBP19.64■□□□□ 0.73
PDLIM4-201ENST00000253754 VRTNQ9H8Y1 702 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms