RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 SCOCQ9UIL1 159 aa19.87■□□□□ 0.77
SNX4-201ENST00000251775 DCTN4Q9UJW0 460 aa19.87■□□□□ 0.77
SNX4-201ENST00000251775 PTPRFP10586 1907 aa19.87■□□□□ 0.77
SNX4-201ENST00000251775 GSC2O15499 205 aa19.87■□□□□ 0.77
SNX4-201ENST00000251775 CCDC22O60826 627 aa19.87■□□□□ 0.77
SNX4-201ENST00000251775 FARP2O94887 1054 aaPredicted RBP19.87■□□□□ 0.77
SNX4-201ENST00000251775 KPNB1Q14974 876 aaKnown RBP19.87■□□□□ 0.77
SNX4-201ENST00000251775 FYB2Q5VWT5 728 aa19.87■□□□□ 0.77
SNX4-201ENST00000251775 CAPN12Q6ZSI9 719 aa19.87■□□□□ 0.77
SNX4-201ENST00000251775 GSTA5Q7RTV2 222 aa19.87■□□□□ 0.77
SNX4-201ENST00000251775 MRRFQ96E11 262 aaKnown RBP19.87■□□□□ 0.77
SNX4-201ENST00000251775 OSBPL8Q9BZF1 889 aa19.87■□□□□ 0.77
SNX4-201ENST00000251775 MAF1Q9H063 256 aa19.87■□□□□ 0.77
SNX4-201ENST00000251775 METTL5Q9NRN9 209 aaKnown RBP19.87■□□□□ 0.77
SNX4-201ENST00000251775 CNTN6Q9UQ52 1028 aa19.87■□□□□ 0.77
SNX4-201ENST00000251775 SKIP12755 728 aa19.86■□□□□ 0.77
SNX4-201ENST00000251775 MAMLD1Q13495 774 aa19.86■□□□□ 0.77
SNX4-201ENST00000251775 SH3D19Q5HYK7 790 aa19.86■□□□□ 0.77
SNX4-201ENST00000251775 LRRC74BQ6ZQY2 392 aa19.86■□□□□ 0.77
SNX4-201ENST00000251775 LBHD1Q9BQE6 289 aaPredicted RBP19.86■□□□□ 0.77
SNX4-201ENST00000251775 FHDC1Q9C0D6 1143 aaPredicted RBP19.86■□□□□ 0.77
SNX4-201ENST00000251775 BTBD7Q9P203 1132 aa19.86■□□□□ 0.77
SNX4-201ENST00000251775 DNALI1O14645 258 aaPredicted RBP19.86■□□□□ 0.77
SNX4-201ENST00000251775 CAPN9O14815 690 aa19.86■□□□□ 0.77
SNX4-201ENST00000251775 TBX10O75333 385 aa19.86■□□□□ 0.77
SNX4-201ENST00000251775 HIRAP54198 1017 aaPredicted RBP19.86■□□□□ 0.77
SNX4-201ENST00000251775 SLC34A1Q06495 639 aa19.86■□□□□ 0.77
SNX4-201ENST00000251775 LIN9Q5TKA1 542 aa19.86■□□□□ 0.77
SNX4-201ENST00000251775 TRIM72Q6ZMU5 477 aa19.86■□□□□ 0.77
SNX4-201ENST00000251775 ZNF276Q8N554 614 aa19.86■□□□□ 0.77
SNX4-201ENST00000251775 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.86■□□□□ 0.77
SNX4-201ENST00000251775 TMEM134Q9H6X4 195 aa19.86■□□□□ 0.77
SNX4-201ENST00000251775 PSMG1O95456 288 aa19.85■□□□□ 0.77
SNX4-201ENST00000251775 TNFSF9P41273 254 aa19.85■□□□□ 0.77
SNX4-201ENST00000251775 OVGP1Q12889 678 aa19.85■□□□□ 0.77
SNX4-201ENST00000251775 PLEKHA7Q6IQ23 1121 aa19.85■□□□□ 0.77
SNX4-201ENST00000251775 PHF13Q86YI8 300 aaPredicted RBP19.85■□□□□ 0.77
SNX4-201ENST00000251775 TRAPPC9Q96Q05 1148 aa19.85■□□□□ 0.77
SNX4-201ENST00000251775 VPS37BQ9H9H4 285 aa19.85■□□□□ 0.77
SNX4-201ENST00000251775 ADCY3O60266 1144 aa19.85■□□□□ 0.77
SNX4-201ENST00000251775 USP2O75604 605 aaPredicted RBP19.85■□□□□ 0.77
SNX4-201ENST00000251775 ZWINTO95229 277 aa19.85■□□□□ 0.77
SNX4-201ENST00000251775 CST3P01034 146 aaPredicted RBP19.85■□□□□ 0.77
SNX4-201ENST00000251775 GSTA2P09210 222 aa19.85■□□□□ 0.77
SNX4-201ENST00000251775 ZSCAN5DPP0CG00 497 aa19.85■□□□□ 0.77
SNX4-201ENST00000251775 KRT4P19013 534 aa19.85■□□□□ 0.77
SNX4-201ENST00000251775 ADRA1DP25100 572 aa19.85■□□□□ 0.77
SNX4-201ENST00000251775 NCOA4Q13772 614 aa19.85■□□□□ 0.77
SNX4-201ENST00000251775 DLK2Q6UY11 383 aa19.85■□□□□ 0.77
SNX4-201ENST00000251775 LBX2Q6XYB7 198 aa19.85■□□□□ 0.77
SNX4-201ENST00000251775 ZC3H18Q86VM9 953 aaKnown RBP19.85■□□□□ 0.77
SNX4-201ENST00000251775 CFAP69A5D8W1 941 aa19.84■□□□□ 0.77
SNX4-201ENST00000251775 SOWAHBA6NEL2 793 aa19.84■□□□□ 0.77
SNX4-201ENST00000251775 TROVE2P10155 538 aaKnown RBP eCLIP19.84■□□□□ 0.77
SNX4-201ENST00000251775 TBXAS1P24557 533 aaPredicted RBP19.84■□□□□ 0.77
SNX4-201ENST00000251775 STAT5BP51692 787 aa19.84■□□□□ 0.77
SNX4-201ENST00000251775 SLC5A9Q2M3M2 681 aa19.84■□□□□ 0.77
SNX4-201ENST00000251775 RHOT1Q8IXI2 618 aa19.84■□□□□ 0.77
SNX4-201ENST00000251775 WDR60Q8WVS4 1066 aa19.84■□□□□ 0.77
SNX4-201ENST00000251775 GATA6Q92908 595 aa19.84■□□□□ 0.77
SNX4-201ENST00000251775 VCPIP1Q96JH7 1222 aa19.84■□□□□ 0.77
SNX4-201ENST00000251775 TRIM4Q9C037 500 aa19.84■□□□□ 0.77
SNX4-201ENST00000251775 USTQ9Y2C2 406 aa19.84■□□□□ 0.77
SNX4-201ENST00000251775 WDR91A4D1P6 747 aa19.84■□□□□ 0.77
SNX4-201ENST00000251775 SMAPO00193 183 aa19.84■□□□□ 0.77
SNX4-201ENST00000251775 PSTPIP1O43586 416 aa19.84■□□□□ 0.77
SNX4-201ENST00000251775 HAUS5O94927 633 aa19.84■□□□□ 0.77
SNX4-201ENST00000251775 TJP3O95049 919 aa19.84■□□□□ 0.77
SNX4-201ENST00000251775 CACNA2D1P54289 1103 aa19.84■□□□□ 0.77
SNX4-201ENST00000251775 DTX3LQ8TDB6 740 aa19.84■□□□□ 0.77
SNX4-201ENST00000251775 CNKSR2Q8WXI2 1034 aa19.84■□□□□ 0.77
SNX4-201ENST00000251775 MRPL47Q9HD33 250 aaKnown RBP19.84■□□□□ 0.77
SNX4-201ENST00000251775 NRBP2Q9NSY0 501 aa19.84■□□□□ 0.77
SNX4-201ENST00000251775 GPRC5DQ9NZD1 345 aa19.84■□□□□ 0.77
SNX4-201ENST00000251775 PSMC3IPQ9P2W1 217 aaPredicted RBP19.84■□□□□ 0.77
SNX4-201ENST00000251775 HEY2Q9UBP5 337 aa19.84■□□□□ 0.77
SNX4-201ENST00000251775 SLC24A2Q9UI40 661 aa19.84■□□□□ 0.77
SNX4-201ENST00000251775 SNCAIPQ9Y6H5 919 aa19.84■□□□□ 0.77
SNX4-201ENST00000251775 TLR3O15455 904 aaKnown RBP19.83■□□□□ 0.77
SNX4-201ENST00000251775 ETS1P14921 441 aa19.83■□□□□ 0.77
SNX4-201ENST00000251775 CD58P19256 250 aa19.83■□□□□ 0.77
SNX4-201ENST00000251775 POLE2P56282 527 aa19.83■□□□□ 0.77
SNX4-201ENST00000251775 RASA2Q15283 850 aa19.83■□□□□ 0.77
SNX4-201ENST00000251775 NBPF20Q3BBV1 942 aa19.83■□□□□ 0.77
SNX4-201ENST00000251775 ZBTB33Q86T24 672 aa19.83■□□□□ 0.77
SNX4-201ENST00000251775 KATNAL2Q8IYT4 538 aa19.83■□□□□ 0.77
SNX4-201ENST00000251775 UBR7Q8N806 425 aa19.83■□□□□ 0.77
SNX4-201ENST00000251775 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.83■□□□□ 0.77
SNX4-201ENST00000251775 PRR11Q96HE9 360 aaPredicted RBP19.83■□□□□ 0.77
SNX4-201ENST00000251775 NSL1Q96IY1 281 aa19.83■□□□□ 0.77
SNX4-201ENST00000251775 PPP1R12CQ9BZL4 782 aa19.83■□□□□ 0.77
SNX4-201ENST00000251775 GYG2O15488 501 aa19.83■□□□□ 0.76
SNX4-201ENST00000251775 FAM189A1O60320 539 aa19.83■□□□□ 0.76
SNX4-201ENST00000251775 GJC1P36383 396 aa19.83■□□□□ 0.76
SNX4-201ENST00000251775 AP1B1Q10567 949 aa19.83■□□□□ 0.76
SNX4-201ENST00000251775 RINLQ6ZS11 566 aa19.83■□□□□ 0.76
SNX4-201ENST00000251775 EEPD1Q7L9B9 569 aa19.83■□□□□ 0.76
SNX4-201ENST00000251775 BRSK2Q8IWQ3 736 aa19.83■□□□□ 0.76
SNX4-201ENST00000251775 ZBED8Q8IZ13 594 aa19.83■□□□□ 0.76
SNX4-201ENST00000251775 PRPF31Q8WWY3 499 aaKnown RBP19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms