RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 RIPK1Q13546 671 aa10.62□□□□□ -0.71
COPB1-201ENST00000249923 ACVR2BQ13705 512 aa10.62□□□□□ -0.71
COPB1-201ENST00000249923 MORF4L2Q15014 288 aa10.62□□□□□ -0.71
COPB1-201ENST00000249923 ZPBP2Q6X784 338 aa10.62□□□□□ -0.71
COPB1-201ENST00000249923 ARHGEF18Q6ZSZ5 1173 aa10.62□□□□□ -0.71
COPB1-201ENST00000249923 SPATS2LQ9NUQ6 558 aaKnown RBP10.62□□□□□ -0.71
COPB1-201ENST00000249923 ZMYND8Q9ULU4 1186 aaPredicted RBP10.62□□□□□ -0.71
COPB1-201ENST00000249923 RPS12P25398 132 aaKnown RBP10.62□□□□□ -0.71
COPB1-201ENST00000249923 CTCFP49711 727 aaPredicted RBP10.62□□□□□ -0.71
COPB1-201ENST00000249923 STAT5BP51692 787 aa10.62□□□□□ -0.71
COPB1-201ENST00000249923 CCNHP51946 323 aaPredicted RBP10.62□□□□□ -0.71
COPB1-201ENST00000249923 TFAMQ00059 246 aaKnown RBP10.62□□□□□ -0.71
COPB1-201ENST00000249923 MAPK6Q16659 721 aa10.62□□□□□ -0.71
COPB1-201ENST00000249923 EFHC2Q5JST6 749 aa10.62□□□□□ -0.71
COPB1-201ENST00000249923 SYCP2LQ5T4T6 812 aa10.62□□□□□ -0.71
COPB1-201ENST00000249923 THEMIS2Q5TEJ8 643 aa10.62□□□□□ -0.71
COPB1-201ENST00000249923 RNF149Q8NC42 400 aa10.62□□□□□ -0.71
COPB1-201ENST00000249923 DTX3LQ8TDB6 740 aa10.62□□□□□ -0.71
COPB1-201ENST00000249923 PTPRN2Q92932 1015 aa10.62□□□□□ -0.71
COPB1-201ENST00000249923 EBF2Q9HAK2 575 aa10.62□□□□□ -0.71
COPB1-201ENST00000249923 PLAC1Q9HBJ0 212 aa10.62□□□□□ -0.71
COPB1-201ENST00000249923 PCDH9Q9HC56 1237 aa10.62□□□□□ -0.71
COPB1-201ENST00000249923 KLHL14Q9P2G3 628 aa10.62□□□□□ -0.71
COPB1-201ENST00000249923 DCTN4Q9UJW0 460 aa10.62□□□□□ -0.71
COPB1-201ENST00000249923 PHTF1Q9UMS5 762 aa10.62□□□□□ -0.71
COPB1-201ENST00000249923 SNCAIPQ9Y6H5 919 aa10.62□□□□□ -0.71
COPB1-201ENST00000249923 IGKV6-21A0A0C4DH24 114 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 SGK1O00141 431 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 CALB1P05937 261 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 CYP3A5P20815 502 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 EIF4BP23588 611 aaKnown RBP10.61□□□□□ -0.71
COPB1-201ENST00000249923 RPL22P35268 128 aaKnown RBP10.61□□□□□ -0.71
COPB1-201ENST00000249923 RAD23BP54727 409 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 AP1ARQ63HQ0 302 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 DCUN1D2Q6PH85 259 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 POTEAQ6S8J7 498 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 ISLR2Q6UXK2 745 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 LBX2Q6XYB7 198 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 XYLT1Q86Y38 959 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 BBOF1Q8ND07 529 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 DNERQ8NFT8 737 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 OSBPL1AQ9BXW6 950 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 PITPNM3Q9BZ71 974 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 CXCL16Q9H2A7 254 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 SMYD3Q9H7B4 428 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 AS3MTQ9HBK9 375 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 NOP53Q9NZM5 478 aaKnown RBP10.61□□□□□ -0.71
COPB1-201ENST00000249923 AP1G2O75843 785 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 UNC5CO95185 931 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 ZBTB7AO95365 584 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 C1QAP02745 245 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 NFICP08651 508 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 CXCL8P10145 99 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 MSH2P43246 934 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 MMRN1Q13201 1228 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 SETDB1Q15047 1291 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 MUM1Q2TAK8 710 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 NPNTQ6UXI9 565 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 RGS9BPQ6ZS82 235 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 THNSL1Q8IYQ7 743 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 ANKRD35Q8N283 1001 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.61□□□□□ -0.71
COPB1-201ENST00000249923 C10orf82Q8WW14 230 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 CFAP57Q96MR6 1250 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 VPS37BQ9H9H4 285 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 G3BP2Q9UN86 482 aaKnown RBP10.61□□□□□ -0.71
COPB1-201ENST00000249923 SHOC2Q9UQ13 582 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 CFAP73A6NFT4 308 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 C19orf81C9J6K1 198 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 CST8O60676 142 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 EDF1O60869 148 aaKnown RBP10.61□□□□□ -0.71
COPB1-201ENST00000249923 RFC5P40937 340 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 GRM1Q13255 1194 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 PDK4Q16654 411 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 DALRD3Q5D0E6 543 aaKnown RBP10.61□□□□□ -0.71
COPB1-201ENST00000249923 ERICH1Q86X53 443 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 C1orf127Q8N9H9 656 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 SLC4A11Q8NBS3 891 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 TMEM35BQ8NCS4 154 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 LRRN4Q8WUT4 740 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 DCAKDQ8WVC6 231 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 SLC7A6OSQ96CW6 309 aaPredicted RBP10.61□□□□□ -0.71
COPB1-201ENST00000249923 KLF6Q99612 283 aaPredicted RBP10.61□□□□□ -0.71
COPB1-201ENST00000249923 METTL5Q9NRN9 209 aaKnown RBP10.61□□□□□ -0.71
COPB1-201ENST00000249923 SLC17A7Q9P2U7 560 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 STARD13Q9Y3M8 1113 aa10.61□□□□□ -0.71
COPB1-201ENST00000249923 OGTO15294 1046 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 PRKCBP05771 671 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 PGK2P07205 417 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 KRT4P19013 534 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 KDELR1P24390 212 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 ADRA1DP25100 572 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 TARSP26639 723 aaKnown RBP10.6□□□□□ -0.71
COPB1-201ENST00000249923 PIGHQ14442 188 aaPredicted RBP10.6□□□□□ -0.71
COPB1-201ENST00000249923 ZNF699Q32M78 642 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 DCAF15Q66K64 600 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 OTOAQ7RTW8 1153 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 RIBC1Q8N443 379 aaPredicted RBP10.6□□□□□ -0.71
COPB1-201ENST00000249923 COPS5Q92905 334 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 ERP27Q96DN0 273 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms