RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 TARSP26639 723 aaKnown RBP26.81■■□□□ 1.88
RAB40C-201ENST00000248139 MIPP30301 263 aa26.81■■□□□ 1.88
RAB40C-201ENST00000248139 CDH5P33151 784 aaPredicted RBP26.81■■□□□ 1.88
RAB40C-201ENST00000248139 AP3M2P53677 418 aa26.81■■□□□ 1.88
RAB40C-201ENST00000248139 MYO1EQ12965 1108 aa26.81■■□□□ 1.88
RAB40C-201ENST00000248139 GJC2Q5T442 439 aaPredicted RBP26.81■■□□□ 1.88
RAB40C-201ENST00000248139 XYLT1Q86Y38 959 aa26.81■■□□□ 1.88
RAB40C-201ENST00000248139 IGDCC3Q8IVU1 814 aa26.81■■□□□ 1.88
RAB40C-201ENST00000248139 RIBC1Q8N443 379 aaPredicted RBP26.81■■□□□ 1.88
RAB40C-201ENST00000248139 KCNN1Q92952 543 aa26.81■■□□□ 1.88
RAB40C-201ENST00000248139 PIWIL1Q96J94 861 aaKnown RBP26.81■■□□□ 1.88
RAB40C-201ENST00000248139 ZNF518BQ9C0D4 1074 aa26.81■■□□□ 1.88
RAB40C-201ENST00000248139 CDT1Q9H211 546 aa26.81■■□□□ 1.88
RAB40C-201ENST00000248139 ETNK1Q9HBU6 452 aa26.81■■□□□ 1.88
RAB40C-201ENST00000248139 SHOC2Q9UQ13 582 aa26.81■■□□□ 1.88
RAB40C-201ENST00000248139 CHKBQ9Y259 395 aa26.81■■□□□ 1.88
RAB40C-201ENST00000248139 KAT6AQ92794 2004 aa26.81■■□□□ 1.88
RAB40C-201ENST00000248139 EDNRBP24530 442 aa26.8■■□□□ 1.88
RAB40C-201ENST00000248139 MKRN3Q13064 507 aaKnown RBP26.8■■□□□ 1.88
RAB40C-201ENST00000248139 ZNF268Q14587 947 aaPredicted RBP26.8■■□□□ 1.88
RAB40C-201ENST00000248139 CDO1Q16878 200 aa26.8■■□□□ 1.88
RAB40C-201ENST00000248139 NIPA2Q8N8Q9 360 aa26.8■■□□□ 1.88
RAB40C-201ENST00000248139 ELOVL4Q9GZR5 314 aa26.8■■□□□ 1.88
RAB40C-201ENST00000248139 ADRA1DP25100 572 aa26.8■■□□□ 1.88
RAB40C-201ENST00000248139 GCLCP48506 637 aaPredicted RBP26.8■■□□□ 1.88
RAB40C-201ENST00000248139 GSCP56915 257 aaPredicted RBP26.8■■□□□ 1.88
RAB40C-201ENST00000248139 YWHAEP62258 255 aaKnown RBP26.8■■□□□ 1.88
RAB40C-201ENST00000248139 PPP1R2P3Q6NXS1 205 aa26.8■■□□□ 1.88
RAB40C-201ENST00000248139 NCAPGQ9BPX3 1015 aa26.8■■□□□ 1.88
RAB40C-201ENST00000248139 CHMP2BQ9UQN3 213 aa26.8■■□□□ 1.88
RAB40C-201ENST00000248139 RNASELQ05823 741 aaKnown RBP26.79■■□□□ 1.88
RAB40C-201ENST00000248139 ZNF667Q5HYK9 610 aa26.79■■□□□ 1.88
RAB40C-201ENST00000248139 HHATQ5VTY9 493 aa26.79■■□□□ 1.88
RAB40C-201ENST00000248139 EFCAB12Q6NXP0 572 aa26.79■■□□□ 1.88
RAB40C-201ENST00000248139 RIOX2Q8IUF8 465 aa26.79■■□□□ 1.88
RAB40C-201ENST00000248139 NAT8LQ8N9F0 302 aa26.79■■□□□ 1.88
RAB40C-201ENST00000248139 SLC4A11Q8NBS3 891 aa26.79■■□□□ 1.88
RAB40C-201ENST00000248139 SPATA33Q96N06 139 aa26.79■■□□□ 1.88
RAB40C-201ENST00000248139 PTPRHQ9HD43 1115 aa26.79■■□□□ 1.88
RAB40C-201ENST00000248139 PDGFCQ9NRA1 345 aa26.79■■□□□ 1.88
RAB40C-201ENST00000248139 PSMC3IPQ9P2W1 217 aaPredicted RBP26.79■■□□□ 1.88
RAB40C-201ENST00000248139 MCM8Q9UJA3 840 aa26.79■■□□□ 1.88
RAB40C-201ENST00000248139 HAO1Q9UJM8 370 aa26.79■■□□□ 1.88
RAB40C-201ENST00000248139 TYROBPO43914 113 aa26.79■■□□□ 1.88
RAB40C-201ENST00000248139 OVGP1Q12889 678 aa26.79■■□□□ 1.88
RAB40C-201ENST00000248139 LRRC8CQ8TDW0 803 aa26.79■■□□□ 1.88
RAB40C-201ENST00000248139 CPB2Q96IY4 423 aa26.79■■□□□ 1.88
RAB40C-201ENST00000248139 PEBP4Q96S96 227 aa26.79■■□□□ 1.88
RAB40C-201ENST00000248139 UBN1Q9NPG3 1134 aa26.79■■□□□ 1.88
RAB40C-201ENST00000248139 ARHGEF3Q9NR81 526 aa26.79■■□□□ 1.88
RAB40C-201ENST00000248139 XPO7Q9UIA9 1087 aaKnown RBP26.79■■□□□ 1.88
RAB40C-201ENST00000248139 LACTBL1A8MY62 500 aa26.78■■□□□ 1.88
RAB40C-201ENST00000248139 SOCS7O14512 581 aa26.78■■□□□ 1.88
RAB40C-201ENST00000248139 AVILO75366 819 aa26.78■■□□□ 1.88
RAB40C-201ENST00000248139 EZRP15311 586 aaKnown RBP26.78■■□□□ 1.88
RAB40C-201ENST00000248139 EIF3EP60228 445 aaKnown RBP26.78■■□□□ 1.88
RAB40C-201ENST00000248139 MXD4Q14582 209 aaPredicted RBP26.78■■□□□ 1.88
RAB40C-201ENST00000248139 C15orf59Q2T9L4 293 aaPredicted RBP26.78■■□□□ 1.88
RAB40C-201ENST00000248139 RNF43Q68DV7 783 aa26.78■■□□□ 1.88
RAB40C-201ENST00000248139 ZNF449Q6P9G9 518 aa26.78■■□□□ 1.88
RAB40C-201ENST00000248139 ASRGL1Q7L266 308 aa26.78■■□□□ 1.88
RAB40C-201ENST00000248139 TDRPQ86YL5 185 aa26.78■■□□□ 1.88
RAB40C-201ENST00000248139 PPIL6Q8IXY8 311 aa26.78■■□□□ 1.88
RAB40C-201ENST00000248139 PAFAH2Q99487 392 aa26.78■■□□□ 1.88
RAB40C-201ENST00000248139 SLC17A7Q9P2U7 560 aa26.78■■□□□ 1.88
RAB40C-201ENST00000248139 PRPF4O43172 522 aaKnown RBP eCLIP26.78■■□□□ 1.882e-7■■■■■ 38.1
RAB40C-201ENST00000248139 MICAL2O94851 1124 aa26.78■■□□□ 1.88
RAB40C-201ENST00000248139 GEMIN4P57678 1058 aaKnown RBP26.78■■□□□ 1.88
RAB40C-201ENST00000248139 JADE1Q6IE81 842 aa26.78■■□□□ 1.88
RAB40C-201ENST00000248139 VSIG1Q86XK7 387 aa26.78■■□□□ 1.88
RAB40C-201ENST00000248139 RPF1Q9H9Y2 349 aaKnown RBP26.78■■□□□ 1.88
RAB40C-201ENST00000248139 TXNRD2Q9NNW7 524 aa26.78■■□□□ 1.88
RAB40C-201ENST00000248139 M0QYV0 167 aa26.77■■□□□ 1.88
RAB40C-201ENST00000248139 ACKR2O00590 384 aa26.77■■□□□ 1.88
RAB40C-201ENST00000248139 RBP3P10745 1247 aa26.77■■□□□ 1.88
RAB40C-201ENST00000248139 POLR2BP30876 1174 aaKnown RBP26.77■■□□□ 1.88
RAB40C-201ENST00000248139 TAP1Q03518 808 aa26.77■■□□□ 1.88
RAB40C-201ENST00000248139 HADHQ16836 314 aaKnown RBP26.77■■□□□ 1.88
RAB40C-201ENST00000248139 Q3C1V9 767 aa26.77■■□□□ 1.88
RAB40C-201ENST00000248139 TSHZ1Q6ZSZ6 1077 aa26.77■■□□□ 1.88
RAB40C-201ENST00000248139 BBS12Q6ZW61 710 aa26.77■■□□□ 1.88
RAB40C-201ENST00000248139 GBP7Q8N8V2 638 aaPredicted RBP26.77■■□□□ 1.88
RAB40C-201ENST00000248139 UTP4Q969X6 686 aaKnown RBP26.77■■□□□ 1.88
RAB40C-201ENST00000248139 RNPEPQ9H4A4 650 aa26.77■■□□□ 1.88
RAB40C-201ENST00000248139 STRIP2Q9ULQ0 834 aa26.77■■□□□ 1.88
RAB40C-201ENST00000248139 IRF6O14896 467 aa26.77■■□□□ 1.88
RAB40C-201ENST00000248139 PROZP22891 400 aa26.77■■□□□ 1.88
RAB40C-201ENST00000248139 PTPN7P35236 360 aa26.77■■□□□ 1.88
RAB40C-201ENST00000248139 MSH2P43246 934 aa26.77■■□□□ 1.88
RAB40C-201ENST00000248139 GRM1Q13255 1194 aa26.77■■□□□ 1.88
RAB40C-201ENST00000248139 FAM102AQ5T9C2 384 aaPredicted RBP26.77■■□□□ 1.88
RAB40C-201ENST00000248139 MOB2Q70IA6 237 aa26.77■■□□□ 1.88
RAB40C-201ENST00000248139 PALM2Q8IXS6 379 aa26.77■■□□□ 1.88
RAB40C-201ENST00000248139 SPATA18Q8TC71 538 aa26.77■■□□□ 1.88
RAB40C-201ENST00000248139 OTUD5Q96G74 571 aa26.77■■□□□ 1.88
RAB40C-201ENST00000248139 NUMBLQ9Y6R0 609 aa26.77■■□□□ 1.88
RAB40C-201ENST00000248139 MCM3APO60318 1980 aa26.77■■□□□ 1.88
RAB40C-201ENST00000248139 KRT7P08729 469 aa26.76■■□□□ 1.87
RAB40C-201ENST00000248139 SLC8A1P32418 973 aa26.76■■□□□ 1.87
RAB40C-201ENST00000248139 ARL4CP56559 192 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms