RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 TMEM132DQ14C87 1099 aa18.24■□□□□ 0.51
LRFN3-201ENST00000246529 MORF4L2Q15014 288 aa18.24■□□□□ 0.51
LRFN3-201ENST00000246529 HADHQ16836 314 aaKnown RBP18.24■□□□□ 0.51
LRFN3-201ENST00000246529 TRNP1Q6NT89 227 aa18.24■□□□□ 0.51
LRFN3-201ENST00000246529 RFX6Q8HWS3 928 aa18.24■□□□□ 0.51
LRFN3-201ENST00000246529 LINC01465Q8N7H1 131 aa18.24■□□□□ 0.51
LRFN3-201ENST00000246529 ANKS4BQ8N8V4 417 aa18.24■□□□□ 0.51
LRFN3-201ENST00000246529 C12orf29Q8N999 325 aa18.24■□□□□ 0.51
LRFN3-201ENST00000246529 PEBP4Q96S96 227 aa18.24■□□□□ 0.51
LRFN3-201ENST00000246529 RNF19AQ9NV58 838 aa18.24■□□□□ 0.51
LRFN3-201ENST00000246529 HAUS2Q9NVX0 235 aa18.24■□□□□ 0.51
LRFN3-201ENST00000246529 CTCFP49711 727 aaPredicted RBP18.24■□□□□ 0.51
LRFN3-201ENST00000246529 LAMC2Q13753 1193 aa18.24■□□□□ 0.51
LRFN3-201ENST00000246529 LACTB2Q53H82 288 aaPredicted RBP18.24■□□□□ 0.51
LRFN3-201ENST00000246529 UNC45BQ8IWX7 931 aa18.24■□□□□ 0.51
LRFN3-201ENST00000246529 CKAP2Q8WWK9 683 aa18.24■□□□□ 0.51
LRFN3-201ENST00000246529 ADPGKQ9BRR6 497 aa18.24■□□□□ 0.51
LRFN3-201ENST00000246529 CALN1Q9BXU9 219 aa18.24■□□□□ 0.51
LRFN3-201ENST00000246529 ACTR5Q9H9F9 607 aaPredicted RBP18.24■□□□□ 0.51
LRFN3-201ENST00000246529 SLC40A1Q9NP59 571 aa18.24■□□□□ 0.51
LRFN3-201ENST00000246529 ABCF3Q9NUQ8 709 aa18.24■□□□□ 0.51
LRFN3-201ENST00000246529 TCRBV7S3A2A0A539 114 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 SNX3O60493 162 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 ABHD2P08910 425 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 KCNA4P22459 653 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 ZNF268Q14587 947 aaPredicted RBP18.23■□□□□ 0.51
LRFN3-201ENST00000246529 FAM187BQ17R55 369 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 MSS51Q4VC12 460 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 FNBP1LQ5T0N5 605 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 NPNTQ6UXI9 565 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 BBS12Q6ZW61 710 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 FNIP1Q8TF40 1166 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 FOXP3Q9BZS1 431 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 NSRP1Q9H0G5 558 aaKnown RBP18.23■□□□□ 0.51
LRFN3-201ENST00000246529 KDM4CQ9H3R0 1056 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 SBF1O95248 1867 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 TSPAN1O60635 241 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 STX2P32856 288 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 TNFAIP2Q03169 654 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 TMEM62Q0P6H9 643 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 ITIH4Q14624 930 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 PKN2Q16513 984 aaKnown RBP18.23■□□□□ 0.51
LRFN3-201ENST00000246529 CCDC142Q17RM4 750 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 C15orf59Q2T9L4 293 aaPredicted RBP18.23■□□□□ 0.51
LRFN3-201ENST00000246529 FAM133BQ5BKY9 247 aaKnown RBP18.23■□□□□ 0.51
LRFN3-201ENST00000246529 C9orf131Q5VYM1 1079 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 MTHFD1LQ6UB35 978 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 CPT1BQ92523 772 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 MCRS1Q96EZ8 462 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 PAIP2Q9BPZ3 127 aaKnown RBP18.23■□□□□ 0.51
LRFN3-201ENST00000246529 C16orf70Q9BSU1 422 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 USP18Q9UMW8 372 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 GINS2Q9Y248 185 aa18.23■□□□□ 0.51
LRFN3-201ENST00000246529 RPL22P35268 128 aaKnown RBP18.22■□□□□ 0.51
LRFN3-201ENST00000246529 RGS7P49802 495 aa18.22■□□□□ 0.51
LRFN3-201ENST00000246529 EFTUD2Q15029 972 aaKnown RBP eCLIP18.22■□□□□ 0.51
LRFN3-201ENST00000246529 CDO1Q16878 200 aa18.22■□□□□ 0.51
LRFN3-201ENST00000246529 ZNF792Q3KQV3 632 aa18.22■□□□□ 0.51
LRFN3-201ENST00000246529 SYCP2LQ5T4T6 812 aa18.22■□□□□ 0.51
LRFN3-201ENST00000246529 FAM71DQ8N9W8 422 aa18.22■□□□□ 0.51
LRFN3-201ENST00000246529 TGS1Q96RS0 853 aaKnown RBP18.22■□□□□ 0.51
LRFN3-201ENST00000246529 DPP3Q9NY33 737 aa18.22■□□□□ 0.51
LRFN3-201ENST00000246529 FARP1Q9Y4F1 1045 aaPredicted RBP18.22■□□□□ 0.51
LRFN3-201ENST00000246529 E5RJQ4 531 aa18.22■□□□□ 0.51
LRFN3-201ENST00000246529 ALOX15BO15296 676 aa18.22■□□□□ 0.51
LRFN3-201ENST00000246529 ECM2O94769 699 aaPredicted RBP18.22■□□□□ 0.51
LRFN3-201ENST00000246529 TRUB2O95900 331 aaKnown RBP18.22■□□□□ 0.51
LRFN3-201ENST00000246529 GPX6P59796 221 aa18.22■□□□□ 0.51
LRFN3-201ENST00000246529 TAZQ16635 292 aa18.22■□□□□ 0.51
LRFN3-201ENST00000246529 CENPUQ71F23 418 aa18.22■□□□□ 0.51
LRFN3-201ENST00000246529 C4orf33Q8N1A6 199 aa18.22■□□□□ 0.51
LRFN3-201ENST00000246529 RSAD2Q8WXG1 361 aa18.22■□□□□ 0.51
LRFN3-201ENST00000246529 ASB7Q9H672 318 aa18.22■□□□□ 0.51
LRFN3-201ENST00000246529 NKIRAS1Q9NYS0 192 aa18.22■□□□□ 0.51
LRFN3-201ENST00000246529 WDR35Q9P2L0 1181 aa18.22■□□□□ 0.51
LRFN3-201ENST00000246529 SHOC2Q9UQ13 582 aa18.22■□□□□ 0.51
LRFN3-201ENST00000246529 PPEF2O14830 753 aa18.21■□□□□ 0.51
LRFN3-201ENST00000246529 OAS1P00973 400 aaKnown RBP18.21■□□□□ 0.51
LRFN3-201ENST00000246529 VDRP11473 427 aa18.21■□□□□ 0.51
LRFN3-201ENST00000246529 FOXN2P32314 431 aa18.21■□□□□ 0.51
LRFN3-201ENST00000246529 WDR4P57081 412 aaKnown RBP18.21■□□□□ 0.51
LRFN3-201ENST00000246529 HIF1AQ16665 826 aa18.21■□□□□ 0.51
LRFN3-201ENST00000246529 OR6B2Q6IFH4 312 aa18.21■□□□□ 0.51
LRFN3-201ENST00000246529 FAM183BPQ6ZVS7 135 aa18.21■□□□□ 0.51
LRFN3-201ENST00000246529 TRABD2AQ86V40 505 aa18.21■□□□□ 0.51
LRFN3-201ENST00000246529 GPRC5AQ8NFJ5 357 aa18.21■□□□□ 0.51
LRFN3-201ENST00000246529 PPTC7Q8NI37 304 aa18.21■□□□□ 0.51
LRFN3-201ENST00000246529 KIF12Q96FN5 646 aa18.21■□□□□ 0.51
LRFN3-201ENST00000246529 WDR83Q9BRX9 315 aaKnown RBP18.21■□□□□ 0.51
LRFN3-201ENST00000246529 TSPAN16Q9UKR8 245 aa18.21■□□□□ 0.51
LRFN3-201ENST00000246529 VGLL3A8MV65 326 aa18.21■□□□□ 0.51
LRFN3-201ENST00000246529 MAGEB2O15479 319 aa18.21■□□□□ 0.51
LRFN3-201ENST00000246529 RNF8O76064 485 aa18.21■□□□□ 0.51
LRFN3-201ENST00000246529 SSTR1P30872 391 aa18.21■□□□□ 0.51
LRFN3-201ENST00000246529 ATICP31939 592 aa18.21■□□□□ 0.51
LRFN3-201ENST00000246529 GABRB2P47870 512 aa18.21■□□□□ 0.51
LRFN3-201ENST00000246529 SNAPC2Q13487 334 aa18.21■□□□□ 0.51
LRFN3-201ENST00000246529 MARCH8Q5T0T0 291 aa18.21■□□□□ 0.51
LRFN3-201ENST00000246529 TRPM8Q7Z2W7 1104 aa18.21■□□□□ 0.51
LRFN3-201ENST00000246529 CMASQ8NFW8 434 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms