RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 FBXO25Q8TCJ0 367 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 SCFD2Q8WU76 684 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 PAFAH2Q99487 392 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 SMAPO00193 183 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 HHIPL2Q6UWX4 724 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 FAM136AQ96C01 138 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 ZBTB10Q96DT7 871 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 HES6Q96HZ4 224 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 CRAMP1Q96RY5 1269 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 VPS33BQ9H267 617 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 M0QYT0 321 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 CLASP2O75122 1294 aaKnown RBP13.88□□□□□ -0.19
NEK4-201ENST00000233027 TCF7P36402 384 aaPredicted RBP13.88□□□□□ -0.19
NEK4-201ENST00000233027 CLK1P49759 484 aaKnown RBP13.88□□□□□ -0.19
NEK4-201ENST00000233027 AQP5P55064 265 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 MGAT5BQ3V5L5 792 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 EFHC1Q5JVL4 640 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 MIER2Q8N344 545 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 STX19Q8N4C7 294 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 ILKAPQ9H0C8 392 aaPredicted RBP13.88□□□□□ -0.19
NEK4-201ENST00000233027 DPP3Q9NY33 737 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 DNAJC16Q9Y2G8 782 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 RPS6KL1Q9Y6S9 549 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 TRPC5OSA6NMA1 111 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 ATP6V1G2O95670 118 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 ALBP02768 609 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 ITGA4P13612 1032 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 TFDP3Q5H9I0 405 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 RIN3Q8TB24 985 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 IARS2Q9NSE4 1012 aaKnown RBP13.88□□□□□ -0.19
NEK4-201ENST00000233027 SCN3BQ9NY72 215 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 FAM205AQ6ZU69 1335 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 STK25O00506 426 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 USP1O94782 785 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 TAL1P17542 331 aaPredicted RBP13.88□□□□□ -0.19
NEK4-201ENST00000233027 ZCWPW2Q504Y3 356 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 SETD3Q86TU7 594 aaPredicted RBP13.88□□□□□ -0.19
NEK4-201ENST00000233027 HS6ST3Q8IZP7 471 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 SMAD5Q99717 465 aaKnown RBP13.88□□□□□ -0.19
NEK4-201ENST00000233027 CYP4F12Q9HCS2 524 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 CNOT7Q9UIV1 285 aaKnown RBP13.88□□□□□ -0.19
NEK4-201ENST00000233027 GLRA3O75311 464 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 POU4F1Q01851 419 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 NAPEPLDQ6IQ20 393 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 IYDQ6PHW0 289 aa13.88□□□□□ -0.19
NEK4-201ENST00000233027 ENTPD3O75355 529 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 KRT16P08779 473 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 PTK6Q13882 451 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 GALNTL6Q49A17 601 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 DDX20Q9UHI6 824 aaKnown RBP13.87□□□□□ -0.19
NEK4-201ENST00000233027 TSC22D4Q9Y3Q8 395 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 CYTH3O43739 400 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 ARP10275 920 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 EPHB2P29323 1055 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 GTF2H3Q13889 308 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 CCDC142Q17RM4 750 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 AASDHQ4L235 1098 aaPredicted RBP13.87□□□□□ -0.19
NEK4-201ENST00000233027 ATG4CQ96DT6 458 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.87□□□□□ -0.19
NEK4-201ENST00000233027 CYBBP04839 570 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 RARGP13631 454 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 PRLRP16471 622 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 L3MBTL3Q96JM7 780 aaPredicted RBP13.87□□□□□ -0.19
NEK4-201ENST00000233027 ECSITQ9BQ95 431 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 UNKQ9C0B0 810 aaKnown RBP13.87□□□□□ -0.19
NEK4-201ENST00000233027 ANKEF1Q9NU02 776 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 DCDC2Q9UHG0 476 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 F8VZ95 297 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 SUPT7LO94864 414 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 UPP2O95045 317 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 FDFT1P37268 417 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 SUGP1Q8IWZ8 645 aaKnown RBP13.87□□□□□ -0.19
NEK4-201ENST00000233027 KAT2BQ92831 832 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 PAWRQ96IZ0 340 aaKnown RBP13.87□□□□□ -0.19
NEK4-201ENST00000233027 ZNF512Q96ME7 567 aaPredicted RBP13.87□□□□□ -0.19
NEK4-201ENST00000233027 FOPNLQ96NB1 174 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 GPR63Q9BZJ6 419 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 FBXO28Q9NVF7 368 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 PDP2Q9P2J9 529 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 ZNRF3Q9ULT6 936 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 E9PBE3 544 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 KLHL41O60662 606 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 RPS6KA5O75582 802 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 FAM153BP0C7A2 387 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 TKFCQ3LXA3 575 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 FAM153CQ494X1 144 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 C11orf96Q7Z7L8 435 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 C3orf20Q8ND61 904 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 BRD8Q9H0E9 1235 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 RIC8BQ9NVN3 520 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 FAM153AQ9UHL3 310 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 SNX13Q9Y5W8 968 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 ERCC6L2Q5T890 1561 aa13.87□□□□□ -0.19
NEK4-201ENST00000233027 PWP1Q13610 501 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 BMPR2Q13873 1038 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 RASA2Q15283 850 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 FAM83EQ2M2I3 478 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 IER5Q5VY09 327 aa13.86□□□□□ -0.19
NEK4-201ENST00000233027 TFRCP02786 760 aaKnown RBP13.86□□□□□ -0.19
NEK4-201ENST00000233027 RRM1P23921 792 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms