RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.05□□□□□ -0.48
CCND1-201ENST00000227507 ASTN1O14525 1302 aa12.05□□□□□ -0.48
CCND1-201ENST00000227507 I3L4J1 428 aa12.05□□□□□ -0.48
CCND1-201ENST00000227507 TBX10O75333 385 aa12.05□□□□□ -0.48
CCND1-201ENST00000227507 USP1O94782 785 aa12.05□□□□□ -0.48
CCND1-201ENST00000227507 TJP3O95049 919 aa12.05□□□□□ -0.48
CCND1-201ENST00000227507 PSMG1O95456 288 aa12.05□□□□□ -0.48
CCND1-201ENST00000227507 GSTA2P09210 222 aa12.05□□□□□ -0.48
CCND1-201ENST00000227507 KRT10P13645 584 aa12.05□□□□□ -0.48
CCND1-201ENST00000227507 YBX3P16989 372 aaKnown RBP eCLIP12.05□□□□□ -0.489e-6■■■□□ 18.6
CCND1-201ENST00000227507 CCNFP41002 786 aa12.05□□□□□ -0.48
CCND1-201ENST00000227507 BFSP1Q12934 665 aa12.05□□□□□ -0.48
CCND1-201ENST00000227507 ACSBG2Q5FVE4 666 aa12.05□□□□□ -0.48
CCND1-201ENST00000227507 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.05□□□□□ -0.48
CCND1-201ENST00000227507 INPP5DQ92835 1189 aa12.05□□□□□ -0.48
CCND1-201ENST00000227507 TSSK1BQ9BXA7 367 aa12.05□□□□□ -0.48
CCND1-201ENST00000227507 CLIC5Q9NZA1 410 aa12.05□□□□□ -0.48
CCND1-201ENST00000227507 ZBTB48P10074 688 aaPredicted RBP12.05□□□□□ -0.48
CCND1-201ENST00000227507 CYP2C9P11712 490 aa12.05□□□□□ -0.48
CCND1-201ENST00000227507 CCNB1P14635 433 aa12.05□□□□□ -0.48
CCND1-201ENST00000227507 SKIV2L2P42285 1042 aaKnown RBP12.05□□□□□ -0.48
CCND1-201ENST00000227507 SLC12A3P55017 1021 aa12.05□□□□□ -0.48
CCND1-201ENST00000227507 DLG4P78352 724 aa12.05□□□□□ -0.48
CCND1-201ENST00000227507 CGB2Q6NT52 195 aa12.05□□□□□ -0.48
CCND1-201ENST00000227507 ARMCX2Q7L311 632 aa12.05□□□□□ -0.48
CCND1-201ENST00000227507 RNF34Q969K3 372 aa12.05□□□□□ -0.48
CCND1-201ENST00000227507 ZNF184Q99676 751 aaPredicted RBP12.05□□□□□ -0.48
CCND1-201ENST00000227507 BTBD10Q9BSF8 475 aa12.05□□□□□ -0.48
CCND1-201ENST00000227507 NACA2Q9H009 215 aa12.05□□□□□ -0.48
CCND1-201ENST00000227507 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.05□□□□□ -0.48
CCND1-201ENST00000227507 R3HDM2Q9Y2K5 976 aaKnown RBP12.05□□□□□ -0.48
CCND1-201ENST00000227507 MYH7P12883 1935 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 E7ENQ6 273 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 ZSCAN9O15535 394 aaPredicted RBP12.04□□□□□ -0.48
CCND1-201ENST00000227507 MAGEA10P43363 369 aaPredicted RBP12.04□□□□□ -0.48
CCND1-201ENST00000227507 MARSP56192 900 aaKnown RBP12.04□□□□□ -0.48
CCND1-201ENST00000227507 METTL7BQ6UX53 244 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 METTL23Q86XA0 190 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 RFWD2Q8NHY2 731 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 ZNF333Q96JL9 665 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 C11orf70Q9BRQ4 267 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 CADM1Q9BY67 442 aaKnown RBP12.04□□□□□ -0.48
CCND1-201ENST00000227507 VTA1Q9NP79 307 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 DDX18Q9NVP1 670 aaKnown RBP12.04□□□□□ -0.48
CCND1-201ENST00000227507 BAZ2AQ9UIF9 1905 aaKnown RBP12.04□□□□□ -0.48
CCND1-201ENST00000227507 COL1A1P02452 1464 aaPredicted RBP12.04□□□□□ -0.48
CCND1-201ENST00000227507 HNRNPCP07910 306 aaKnown RBP eCLIP12.04□□□□□ -0.485e-7■□□□□ 8.9
CCND1-201ENST00000227507 SUPT20HL2P0C7V6 817 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 GNAZP19086 355 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 NSFP46459 744 aaKnown RBP12.04□□□□□ -0.48
CCND1-201ENST00000227507 ALDH18A1P54886 795 aaKnown RBP12.04□□□□□ -0.48
CCND1-201ENST00000227507 CCDC117Q8IWD4 279 aaPredicted RBP12.04□□□□□ -0.48
CCND1-201ENST00000227507 BBOF1Q8ND07 529 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 CCDC110Q8TBZ0 833 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 DHX38Q92620 1227 aaKnown RBP12.04□□□□□ -0.48
CCND1-201ENST00000227507 DTNBP1Q96EV8 351 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 CLPTM1LQ96KA5 538 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 FAM213AQ9BRX8 229 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 MIS12Q9H081 205 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 PCMTD2Q9NV79 361 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 PDP2Q9P2J9 529 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 STARD13Q9Y3M8 1113 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 PCDHB4Q9Y5E5 795 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 SLC16A3O15427 465 aaKnown RBP12.04□□□□□ -0.48
CCND1-201ENST00000227507 WFS1O76024 890 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 ETS1P14921 441 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 VAMP7P51809 220 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 NEK3P51956 506 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 JAM2P57087 298 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 YWHAGP61981 247 aaKnown RBP eCLIP12.04□□□□□ -0.48
CCND1-201ENST00000227507 FOXD4Q12950 439 aaPredicted RBP12.04□□□□□ -0.48
CCND1-201ENST00000227507 IER5Q5VY09 327 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 KIAA1841Q6NSI8 718 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 CLNKQ7Z7G1 428 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 RAB3IL1Q8TBN0 382 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 PREBQ9HCU5 417 aa12.04□□□□□ -0.48
CCND1-201ENST00000227507 PRKCBP05771 671 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 ATP6V1B1P15313 513 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 MUTP22033 750 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 MAN1A1P33908 653 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 PTGER2P43116 358 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 CCDC15Q0P6D6 951 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 DGKZQ13574 1117 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 LBRQ14739 615 aaKnown RBP12.03□□□□□ -0.48
CCND1-201ENST00000227507 TMEM132BQ14DG7 1078 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 NIPA1Q7RTP0 329 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 MTBPQ96DY7 904 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 TMEM109Q9BVC6 243 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 AGO4Q9HCK5 861 aaKnown RBP12.03□□□□□ -0.48
CCND1-201ENST00000227507 AGPAT3Q9NRZ7 376 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 MYH14Q7Z406 1995 aaKnown RBP12.03□□□□□ -0.48
CCND1-201ENST00000227507 EDF1O60869 148 aaKnown RBP12.03□□□□□ -0.48
CCND1-201ENST00000227507 OAS1P00973 400 aaKnown RBP12.03□□□□□ -0.48
CCND1-201ENST00000227507 FAM163BP0C2L3 166 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 SNHG28P0DPA3 235 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 MYL2P10916 166 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 POLR2BP30876 1174 aaKnown RBP12.03□□□□□ -0.48
CCND1-201ENST00000227507 FASTKD3Q14CZ7 662 aaKnown RBP12.03□□□□□ -0.48
CCND1-201ENST00000227507 FAM182AQ5T1J6 154 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 RINT1Q6NUQ1 792 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms