RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 PLD1Q13393 1074 aa15.3■□□□□ 0.04
SUPT4H1-201ENST00000225504 PPP1R26Q5T8A7 1209 aaPredicted RBP15.3■□□□□ 0.04
SUPT4H1-201ENST00000225504 IQCEQ6IPM2 695 aa15.3■□□□□ 0.04
SUPT4H1-201ENST00000225504 FAM35AQ86V20 835 aa15.3■□□□□ 0.04
SUPT4H1-201ENST00000225504 ELMOD1Q8N336 334 aa15.3■□□□□ 0.04
SUPT4H1-201ENST00000225504 HNRNPABQ99729 332 aaKnown RBP15.3■□□□□ 0.04
SUPT4H1-201ENST00000225504 PRKAG3Q9UGI9 489 aa15.3■□□□□ 0.04
SUPT4H1-201ENST00000225504 PCDHB4Q9Y5E5 795 aa15.3■□□□□ 0.04
SUPT4H1-201ENST00000225504 SLC38A8A6NNN8 435 aa15.29■□□□□ 0.04
SUPT4H1-201ENST00000225504 F8VP50 259 aa15.29■□□□□ 0.04
SUPT4H1-201ENST00000225504 EPHA5P54756 1037 aa15.29■□□□□ 0.04
SUPT4H1-201ENST00000225504 PTPN21Q16825 1174 aa15.29■□□□□ 0.04
SUPT4H1-201ENST00000225504 ARHGAP44Q17R89 818 aa15.29■□□□□ 0.04
SUPT4H1-201ENST00000225504 TMEM270Q6UE05 265 aa15.29■□□□□ 0.04
SUPT4H1-201ENST00000225504 VSTM1Q6UX27 236 aa15.29■□□□□ 0.04
SUPT4H1-201ENST00000225504 GAREM2Q75VX8 874 aa15.29■□□□□ 0.04
SUPT4H1-201ENST00000225504 GET4Q7L5D6 327 aaPredicted RBP15.29■□□□□ 0.04
SUPT4H1-201ENST00000225504 ZMIZ2Q8NF64 920 aa15.29■□□□□ 0.04
SUPT4H1-201ENST00000225504 TFAP2BQ92481 460 aa15.29■□□□□ 0.04
SUPT4H1-201ENST00000225504 UHRF1Q96T88 793 aaPredicted RBP15.29■□□□□ 0.04
SUPT4H1-201ENST00000225504 SMOQ99835 787 aa15.29■□□□□ 0.04
SUPT4H1-201ENST00000225504 ZSWIM1Q9BR11 485 aa15.29■□□□□ 0.04
SUPT4H1-201ENST00000225504 IL21Q9HBE4 155 aa15.29■□□□□ 0.04
SUPT4H1-201ENST00000225504 APEX2Q9UBZ4 518 aa15.29■□□□□ 0.04
SUPT4H1-201ENST00000225504 LIMD1Q9UGP4 676 aa15.29■□□□□ 0.04
SUPT4H1-201ENST00000225504 MAGED2Q9UNF1 606 aaPredicted RBP15.29■□□□□ 0.04
SUPT4H1-201ENST00000225504 MRPS23Q9Y3D9 190 aaKnown RBP15.29■□□□□ 0.04
SUPT4H1-201ENST00000225504 ASB3Q9Y575 518 aa15.29■□□□□ 0.04
SUPT4H1-201ENST00000225504 BECN2A8MW95 431 aa15.28■□□□□ 0.04
SUPT4H1-201ENST00000225504 AP1G2O75843 785 aa15.28■□□□□ 0.04
SUPT4H1-201ENST00000225504 VCANP13611 3396 aa15.28■□□□□ 0.04
SUPT4H1-201ENST00000225504 CEBPBP17676 345 aa15.28■□□□□ 0.04
SUPT4H1-201ENST00000225504 GBP2P32456 591 aaPredicted RBP15.28■□□□□ 0.04
SUPT4H1-201ENST00000225504 USP46P62068 366 aa15.28■□□□□ 0.04
SUPT4H1-201ENST00000225504 CYP4A22Q5TCH4 519 aa15.28■□□□□ 0.04
SUPT4H1-201ENST00000225504 TMEM150AQ86TG1 271 aa15.28■□□□□ 0.04
SUPT4H1-201ENST00000225504 TTC39CQ8N584 583 aa15.28■□□□□ 0.04
SUPT4H1-201ENST00000225504 SHKBP1Q8TBC3 707 aa15.28■□□□□ 0.04
SUPT4H1-201ENST00000225504 FGF13Q92913 245 aa15.28■□□□□ 0.04
SUPT4H1-201ENST00000225504 MCRS1Q96EZ8 462 aa15.28■□□□□ 0.04
SUPT4H1-201ENST00000225504 C8orf48Q96LL4 319 aa15.28■□□□□ 0.04
SUPT4H1-201ENST00000225504 ZSWIM3Q96MP5 696 aa15.28■□□□□ 0.04
SUPT4H1-201ENST00000225504 COL25A1Q9BXS0 654 aaPredicted RBP15.28■□□□□ 0.04
SUPT4H1-201ENST00000225504 FAM124BQ9H5Z6 455 aaPredicted RBP15.28■□□□□ 0.04
SUPT4H1-201ENST00000225504 AVENQ9NQS1 362 aaPredicted RBP15.28■□□□□ 0.04
SUPT4H1-201ENST00000225504 ASAH2Q9NR71 780 aa15.28■□□□□ 0.04
SUPT4H1-201ENST00000225504 KRT82Q9NSB4 513 aa15.28■□□□□ 0.04
SUPT4H1-201ENST00000225504 DNAJC12Q9UKB3 198 aa15.28■□□□□ 0.04
SUPT4H1-201ENST00000225504 CNTN6Q9UQ52 1028 aa15.28■□□□□ 0.04
SUPT4H1-201ENST00000225504 DOCK8Q8NF50 2099 aa15.28■□□□□ 0.04
SUPT4H1-201ENST00000225504 A0A1W2PRU2 124 aa15.27■□□□□ 0.04
SUPT4H1-201ENST00000225504 LGALS16A8MUM7 142 aa15.27■□□□□ 0.04
SUPT4H1-201ENST00000225504 TEX33O43247 280 aa15.27■□□□□ 0.04
SUPT4H1-201ENST00000225504 SSTR3P32745 418 aaPredicted RBP15.27■□□□□ 0.04
SUPT4H1-201ENST00000225504 MFAP3P55082 362 aa15.27■□□□□ 0.04
SUPT4H1-201ENST00000225504 MAP3K7CLP57077 242 aa15.27■□□□□ 0.04
SUPT4H1-201ENST00000225504 YWHAEP62258 255 aaKnown RBP15.27■□□□□ 0.04
SUPT4H1-201ENST00000225504 VEPH1Q14D04 833 aa15.27■□□□□ 0.04
SUPT4H1-201ENST00000225504 KLHDC7AQ5VTJ3 777 aa15.27■□□□□ 0.04
SUPT4H1-201ENST00000225504 LRSAM1Q6UWE0 723 aa15.27■□□□□ 0.04
SUPT4H1-201ENST00000225504 PDZD4Q76G19 769 aaPredicted RBP15.27■□□□□ 0.04
SUPT4H1-201ENST00000225504 OTOP3Q7RTS5 596 aa15.27■□□□□ 0.04
SUPT4H1-201ENST00000225504 ITIH5Q86UX2 942 aa15.27■□□□□ 0.04
SUPT4H1-201ENST00000225504 GJD3Q8N144 294 aa15.27■□□□□ 0.04
SUPT4H1-201ENST00000225504 RBBP8NLQ8NC74 664 aaPredicted RBP15.27■□□□□ 0.04
SUPT4H1-201ENST00000225504 KHSRPQ92945 711 aaKnown RBP eCLIP15.27■□□□□ 0.04
SUPT4H1-201ENST00000225504 SPATA17Q96L03 361 aa15.27■□□□□ 0.04
SUPT4H1-201ENST00000225504 NAP1L5Q96NT1 182 aaPredicted RBP15.27■□□□□ 0.04
SUPT4H1-201ENST00000225504 LSM14BQ9BX40 385 aaKnown RBP15.27■□□□□ 0.04
SUPT4H1-201ENST00000225504 ACP6Q9NPH0 428 aa15.27■□□□□ 0.04
SUPT4H1-201ENST00000225504 CDH7Q9ULB5 785 aa15.27■□□□□ 0.04
SUPT4H1-201ENST00000225504 USTQ9Y2C2 406 aa15.27■□□□□ 0.04
SUPT4H1-201ENST00000225504 SIK3Q9Y2K2 1263 aa15.27■□□□□ 0.04
SUPT4H1-201ENST00000225504 FOXN3O00409 490 aaPredicted RBP15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 TNFRSF10BO14763 440 aa15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 EPHB6O15197 1021 aa15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 NOL4O94818 638 aa15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 F11P03951 625 aa15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 PNMA6AP0CW24 399 aaPredicted RBP15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 CSH1P0DML2 217 aa15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 CSH2P0DML3 217 aa15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 LAMP2P13473 410 aa15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 KRT5P13647 590 aa15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 CD19P15391 556 aa15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 GABRR2P28476 465 aa15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 ZNF132P52740 706 aa15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 UBXN1Q04323 297 aa15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 SYCP1Q15431 976 aa15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 TEAD2Q15562 447 aa15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 TAF12Q16514 161 aa15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 STXBP5Q5T5C0 1151 aa15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 CLEC20AQ6ZU45 233 aa15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 GPIHBP1Q8IV16 184 aa15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 NPAS3Q8IXF0 933 aa15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 ANKRD20A12PQ8NF67 263 aa15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 SCAMP5Q8TAC9 235 aa15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 RSAD2Q8WXG1 361 aa15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 SMARCD1Q96GM5 515 aa15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 TSPY26PQ9H489 355 aa15.27■□□□□ 0.03
SUPT4H1-201ENST00000225504 CSNK1G1Q9HCP0 422 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms