RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 FAM102AQ5T9C2 384 aaPredicted RBP15.35■□□□□ 0.05
CNOT3-201ENST00000221232 FAXCQ5TGI0 409 aa15.35■□□□□ 0.05
CNOT3-201ENST00000221232 HHATQ5VTY9 493 aa15.35■□□□□ 0.05
CNOT3-201ENST00000221232 C12orf29Q8N999 325 aa15.35■□□□□ 0.05
CNOT3-201ENST00000221232 FBXO36Q8NEA4 188 aa15.35■□□□□ 0.05
CNOT3-201ENST00000221232 FBF1Q8TES7 1133 aa15.35■□□□□ 0.05
CNOT3-201ENST00000221232 DDX56Q9NY93 547 aaKnown RBP15.35■□□□□ 0.05
CNOT3-201ENST00000221232 EURLQ9NYK6 297 aa15.35■□□□□ 0.05
CNOT3-201ENST00000221232 CHMP2BQ9UQN3 213 aa15.35■□□□□ 0.05
CNOT3-201ENST00000221232 RLFQ13129 1914 aa15.35■□□□□ 0.05
CNOT3-201ENST00000221232 CLUHO75153 1309 aa15.35■□□□□ 0.05
CNOT3-201ENST00000221232 A0A087WZ62 844 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 SIGLEC16A6NMB1 481 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 MICAL2O94851 1124 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 STAG3L1P0CL83 205 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 POLR2BP30876 1174 aaKnown RBP15.34■□□□□ 0.05
CNOT3-201ENST00000221232 PSEN1P49768 467 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 OVGP1Q12889 678 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 ACCSLQ4AC99 568 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 CELF3Q5SZQ8 465 aaKnown RBP15.34■□□□□ 0.05
CNOT3-201ENST00000221232 LVRNQ6Q4G3 990 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 SLC35B2Q8TB61 432 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 TMEM237Q96Q45 408 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 FDXACB1Q9BRP7 624 aaPredicted RBP15.34■□□□□ 0.05
CNOT3-201ENST00000221232 XPO7Q9UIA9 1087 aaKnown RBP15.34■□□□□ 0.05
CNOT3-201ENST00000221232 DRG1Q9Y295 367 aaKnown RBP15.34■□□□□ 0.05
CNOT3-201ENST00000221232 ACKR2O00590 384 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 SOCS7O14512 581 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 ASMTLO95671 621 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 ITGAVP06756 1048 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 FGFR1P11362 822 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 AP3M2P53677 418 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 MTFR1Q15390 333 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 MAP1SQ66K74 1059 aaPredicted RBP15.34■□□□□ 0.05
CNOT3-201ENST00000221232 XYLT1Q86Y38 959 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 SLC4A11Q8NBS3 891 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 TMEM63AO94886 807 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 RBP3P10745 1247 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 BNIP1Q12981 228 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 SEPT7Q16181 437 aaKnown RBP15.34■□□□□ 0.05
CNOT3-201ENST00000221232 LRRC38Q5VT99 294 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 OR6B2Q6IFH4 312 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 ZNF449Q6P9G9 518 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 VSIG1Q86XK7 387 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 IGDCC3Q8IVU1 814 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 KIRREL3Q8IZU9 778 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 ANKLE1Q8NAG6 615 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 SPATA18Q8TC71 538 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 CCHCR1Q8TD31 782 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 ERP27Q96DN0 273 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 ADPGKQ9BRR6 497 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 PCDH9Q9HC56 1237 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 PRKAG3Q9UGI9 489 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 DCTN4Q9UJW0 460 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 AKT3Q9Y243 479 aa15.34■□□□□ 0.05
CNOT3-201ENST00000221232 ARID2Q68CP9 1835 aa15.33■□□□□ 0.05
CNOT3-201ENST00000221232 GSTA1P08263 222 aa15.33■□□□□ 0.04
CNOT3-201ENST00000221232 EDNRBP24530 442 aa15.33■□□□□ 0.04
CNOT3-201ENST00000221232 TARSP26639 723 aaKnown RBP15.33■□□□□ 0.04
CNOT3-201ENST00000221232 SPARCL1Q14515 664 aa15.33■□□□□ 0.04
CNOT3-201ENST00000221232 DARS2Q6PI48 645 aaKnown RBP15.33■□□□□ 0.04
CNOT3-201ENST00000221232 TSHZ1Q6ZSZ6 1077 aa15.33■□□□□ 0.04
CNOT3-201ENST00000221232 LRRC8CQ8TDW0 803 aa15.33■□□□□ 0.04
CNOT3-201ENST00000221232 NKD2Q969F2 451 aaPredicted RBP15.33■□□□□ 0.04
CNOT3-201ENST00000221232 STAMBPL1Q96FJ0 436 aa15.33■□□□□ 0.04
CNOT3-201ENST00000221232 LPIN3Q9BQK8 851 aa15.33■□□□□ 0.04
CNOT3-201ENST00000221232 WDR83Q9BRX9 315 aaKnown RBP15.33■□□□□ 0.04
CNOT3-201ENST00000221232 ZNF518BQ9C0D4 1074 aa15.33■□□□□ 0.04
CNOT3-201ENST00000221232 MYLK2Q9H1R3 596 aa15.33■□□□□ 0.04
CNOT3-201ENST00000221232 ETNK1Q9HBU6 452 aa15.33■□□□□ 0.04
CNOT3-201ENST00000221232 RABGEF1Q9UJ41 708 aa15.33■□□□□ 0.04
CNOT3-201ENST00000221232 USP18Q9UMW8 372 aa15.33■□□□□ 0.04
CNOT3-201ENST00000221232 PCDHGC3Q9UN70 934 aa15.33■□□□□ 0.04
CNOT3-201ENST00000221232 HEY1Q9Y5J3 304 aa15.33■□□□□ 0.04
CNOT3-201ENST00000221232 SSC5DA1L4H1 1573 aa15.33■□□□□ 0.04
CNOT3-201ENST00000221232 F5H423 210 aaPredicted RBP15.33■□□□□ 0.04
CNOT3-201ENST00000221232 RNF8O76064 485 aa15.33■□□□□ 0.04
CNOT3-201ENST00000221232 ADRA1DP25100 572 aa15.33■□□□□ 0.04
CNOT3-201ENST00000221232 CDH6P55285 790 aa15.33■□□□□ 0.04
CNOT3-201ENST00000221232 RNASELQ05823 741 aaKnown RBP15.33■□□□□ 0.04
CNOT3-201ENST00000221232 PTPN11Q06124 597 aaPredicted RBP15.33■□□□□ 0.04
CNOT3-201ENST00000221232 GALNTL6Q49A17 601 aa15.33■□□□□ 0.04
CNOT3-201ENST00000221232 CDCA2Q69YH5 1023 aaPredicted RBP15.33■□□□□ 0.04
CNOT3-201ENST00000221232 RELL1Q8IUW5 271 aa15.33■□□□□ 0.04
CNOT3-201ENST00000221232 TTC25Q96NG3 672 aa15.33■□□□□ 0.04
CNOT3-201ENST00000221232 CXCL16Q9H2A7 254 aa15.33■□□□□ 0.04
CNOT3-201ENST00000221232 RXFP1Q9HBX9 757 aa15.33■□□□□ 0.04
CNOT3-201ENST00000221232 PTPRHQ9HD43 1115 aa15.33■□□□□ 0.04
CNOT3-201ENST00000221232 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.33■□□□□ 0.04
CNOT3-201ENST00000221232 HAO1Q9UJM8 370 aa15.33■□□□□ 0.04
CNOT3-201ENST00000221232 H7C0C1 242 aa15.32■□□□□ 0.04
CNOT3-201ENST00000221232 KRT7P08729 469 aa15.32■□□□□ 0.04
CNOT3-201ENST00000221232 TGFB3P10600 412 aa15.32■□□□□ 0.04
CNOT3-201ENST00000221232 MAP2K2P36507 400 aa15.32■□□□□ 0.04
CNOT3-201ENST00000221232 ATP5OP48047 213 aa15.32■□□□□ 0.04
CNOT3-201ENST00000221232 ARL4CP56559 192 aa15.32■□□□□ 0.04
CNOT3-201ENST00000221232 SH3D19Q5HYK7 790 aa15.32■□□□□ 0.04
CNOT3-201ENST00000221232 DRICH1Q6PGQ1 229 aaPredicted RBP15.32■□□□□ 0.04
CNOT3-201ENST00000221232 CCDC91Q7Z6B0 441 aa15.32■□□□□ 0.04
CNOT3-201ENST00000221232 FAM167AQ96KS9 214 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms