RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 CHKAP35790 457 aa11.05□□□□□ -0.64
VPS18-201ENST00000220509 MCCD1P59942 119 aaPredicted RBP11.05□□□□□ -0.64
VPS18-201ENST00000220509 LRRC36Q1X8D7 754 aa11.05□□□□□ -0.64
VPS18-201ENST00000220509 SPOPLQ6IQ16 392 aa11.05□□□□□ -0.64
VPS18-201ENST00000220509 LRRC8CQ8TDW0 803 aa11.05□□□□□ -0.64
VPS18-201ENST00000220509 LZICQ8WZA0 190 aa11.05□□□□□ -0.64
VPS18-201ENST00000220509 KCTD10Q9H3F6 313 aa11.05□□□□□ -0.64
VPS18-201ENST00000220509 ARHGEF38Q9NXL2 777 aa11.05□□□□□ -0.64
VPS18-201ENST00000220509 ASTN1O14525 1302 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 FRMPD4Q14CM0 1322 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 ATXN2Q99700 1313 aaKnown RBP11.04□□□□□ -0.64
VPS18-201ENST00000220509 PDE4DIPQ5VU43 2346 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 A0A0G2JND7 137 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 EXOC1LA0A1B0GW35 172 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 PJA2O43164 708 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 SNX3O60493 162 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 OPHN1O60890 802 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 ENTPD5O75356 428 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 PDGFRBP09619 1106 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 ANXA13P27216 316 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 TNFRSF8P28908 595 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 PHKA2P46019 1235 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 RASSF2P50749 326 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 RASA2Q15283 850 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 UBAP2Q5T6F2 1119 aaKnown RBP11.04□□□□□ -0.64
VPS18-201ENST00000220509 RNF220Q5VTB9 566 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 ZNF554Q86TJ5 538 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 C4orf19Q8IY42 314 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 FERD3LQ96RJ6 166 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 P2RX7Q99572 595 aaKnown RBP11.04□□□□□ -0.64
VPS18-201ENST00000220509 DDX50Q9BQ39 737 aaKnown RBP11.04□□□□□ -0.64
VPS18-201ENST00000220509 SAYSD1Q9NPB0 183 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 UBR3Q6ZT12 1888 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 RASA4BC9J798 803 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 AP3B1O00203 1094 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 RASA4O43374 803 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 CBX6O95503 412 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 GHRP10912 638 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 PYGMP11217 842 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 DARS2Q6PI48 645 aaKnown RBP11.04□□□□□ -0.64
VPS18-201ENST00000220509 RHOT1Q8IXI2 618 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 PCDHB2Q9Y5E7 798 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 PDLIM1O00151 329 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 MCF2LO15068 1137 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 KRT17Q04695 432 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 VGLL4Q14135 290 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 CNGA3Q16281 694 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 ARHGEF19Q8IW93 802 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 GPC2Q8N158 579 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 C4orf33Q8N1A6 199 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 TTC39CQ8N584 583 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 DNAJC9Q8WXX5 260 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 UPF1Q92900 1129 aaKnown RBP eCLIP11.04□□□□□ -0.64
VPS18-201ENST00000220509 PWWP2AQ96N64 755 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 ZMYND8Q9ULU4 1186 aaPredicted RBP11.04□□□□□ -0.64
VPS18-201ENST00000220509 MAGED2Q9UNF1 606 aaPredicted RBP11.04□□□□□ -0.64
VPS18-201ENST00000220509 CNTNAP1P78357 1384 aa11.04□□□□□ -0.64
VPS18-201ENST00000220509 PRPSAP2O60256 369 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 CALCAP01258 141 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 EPHB2P29323 1055 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 TMED10P49755 219 aaKnown RBP11.03□□□□□ -0.64
VPS18-201ENST00000220509 PPP3CAQ08209 521 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 FKBP1CQ5VVH2 108 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 PDCD7Q8N8D1 485 aaKnown RBP11.03□□□□□ -0.64
VPS18-201ENST00000220509 SNX27Q96L92 541 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 SLC38A10Q9HBR0 1119 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 ERVK-5Q9HDB9 667 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 TXLNGQ9NUQ3 528 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 HEY1Q9Y5J3 304 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 CENPFP49454 3210 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 M0QYV0 167 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 PIK3CDO00329 1044 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 TGFB1I1O43294 461 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 FOXD2O60548 495 aaPredicted RBP11.03□□□□□ -0.64
VPS18-201ENST00000220509 TJP3O95049 919 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 CCDC166P0CW27 439 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 CYP11B1P15538 503 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 CA4P22748 312 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 PHBP35232 272 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 TSPY1Q01534 308 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 BTNL9Q6UXG8 535 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 SNX25Q9H3E2 840 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 GGA2Q9UJY4 613 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 VAV3Q9UKW4 847 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.03□□□□□ -0.64
VPS18-201ENST00000220509 FAM187AA6NFU0 413 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 LCA5LO95447 670 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 AGTP01019 485 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 EFNA5P52803 228 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 ORC1Q13415 861 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 FYB2Q5VWT5 728 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 LRRC49Q8IUZ0 686 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 FAM9CQ8IZT9 166 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 FITM2Q8N6M3 262 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 HIPK4Q8NE63 616 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 CFAP61Q8NHU2 1237 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 TTC8Q8TAM2 541 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 ACSF2Q96CM8 615 aaPredicted RBP11.03□□□□□ -0.64
VPS18-201ENST00000220509 MIS12Q9H081 205 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 AP5M1Q9H0R1 490 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms