RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 EFCAB12Q6NXP0 572 aa15.53■□□□□ 0.08
NDFIP2-201ENST00000218652 C16orf86Q6ZW13 317 aa15.53■□□□□ 0.08
NDFIP2-201ENST00000218652 HDDC2Q7Z4H3 204 aa15.53■□□□□ 0.08
NDFIP2-201ENST00000218652 KAT2BQ92831 832 aa15.53■□□□□ 0.08
NDFIP2-201ENST00000218652 CBWD1Q9BRT8 395 aa15.53■□□□□ 0.08
NDFIP2-201ENST00000218652 TMEM121Q9BTD3 319 aa15.53■□□□□ 0.08
NDFIP2-201ENST00000218652 ARHGAP20Q9P2F6 1191 aa15.53■□□□□ 0.08
NDFIP2-201ENST00000218652 CFAP99D6REC4 459 aa15.53■□□□□ 0.08
NDFIP2-201ENST00000218652 MAGEB2O15479 319 aa15.53■□□□□ 0.08
NDFIP2-201ENST00000218652 MTSS1O43312 755 aa15.53■□□□□ 0.08
NDFIP2-201ENST00000218652 UPP2O95045 317 aa15.53■□□□□ 0.08
NDFIP2-201ENST00000218652 PSMA4P25789 261 aaKnown RBP15.53■□□□□ 0.08
NDFIP2-201ENST00000218652 GLRA4Q5JXX5 417 aa15.53■□□□□ 0.08
NDFIP2-201ENST00000218652 C11orf63Q6NUN7 778 aa15.53■□□□□ 0.08
NDFIP2-201ENST00000218652 TTI2Q6NXR4 508 aa15.53■□□□□ 0.08
NDFIP2-201ENST00000218652 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.53■□□□□ 0.08
NDFIP2-201ENST00000218652 BLOC1S5Q8TDH9 187 aa15.53■□□□□ 0.08
NDFIP2-201ENST00000218652 NMD3Q96D46 503 aaKnown RBP15.53■□□□□ 0.08
NDFIP2-201ENST00000218652 ELP3Q9H9T3 547 aa15.53■□□□□ 0.08
NDFIP2-201ENST00000218652 M0QYT0 321 aa15.52■□□□□ 0.08
NDFIP2-201ENST00000218652 RNF103O00237 685 aa15.52■□□□□ 0.08
NDFIP2-201ENST00000218652 THRAP10827 490 aa15.52■□□□□ 0.08
NDFIP2-201ENST00000218652 AVPR1AP37288 418 aa15.52■□□□□ 0.08
NDFIP2-201ENST00000218652 ACADSBP45954 432 aa15.52■□□□□ 0.08
NDFIP2-201ENST00000218652 ZNF467Q7Z7K2 595 aaPredicted RBP15.52■□□□□ 0.08
NDFIP2-201ENST00000218652 RUSC1Q9BVN2 902 aa15.52■□□□□ 0.08
NDFIP2-201ENST00000218652 TMBIM4Q9HC24 238 aa15.52■□□□□ 0.08
NDFIP2-201ENST00000218652 SOX13Q9UN79 622 aa15.52■□□□□ 0.08
NDFIP2-201ENST00000218652 URB1O60287 2271 aaKnown RBP15.52■□□□□ 0.08
NDFIP2-201ENST00000218652 TRPC5OSA6NMA1 111 aa15.52■□□□□ 0.08
NDFIP2-201ENST00000218652 E9PBE3 544 aa15.52■□□□□ 0.08
NDFIP2-201ENST00000218652 F8W810 466 aa15.52■□□□□ 0.08
NDFIP2-201ENST00000218652 KLHL41O60662 606 aa15.52■□□□□ 0.08
NDFIP2-201ENST00000218652 CD4P01730 458 aa15.52■□□□□ 0.08
NDFIP2-201ENST00000218652 PSMC3P17980 439 aa15.52■□□□□ 0.08
NDFIP2-201ENST00000218652 CUL2Q13617 745 aa15.52■□□□□ 0.08
NDFIP2-201ENST00000218652 LAMC2Q13753 1193 aa15.52■□□□□ 0.08
NDFIP2-201ENST00000218652 PAPD7Q5XG87 772 aaKnown RBP15.52■□□□□ 0.08
NDFIP2-201ENST00000218652 FAM117BQ6P1L5 589 aa15.52■□□□□ 0.08
NDFIP2-201ENST00000218652 TFB1MQ8WVM0 346 aaKnown RBP15.52■□□□□ 0.08
NDFIP2-201ENST00000218652 PRMT7Q9NVM4 692 aaPredicted RBP15.52■□□□□ 0.08
NDFIP2-201ENST00000218652 STMN3Q9NZ72 180 aa15.52■□□□□ 0.08
NDFIP2-201ENST00000218652 SELENONQ9NZV5 590 aa15.52■□□□□ 0.08
NDFIP2-201ENST00000218652 DNAJC16Q9Y2G8 782 aa15.52■□□□□ 0.08
NDFIP2-201ENST00000218652 SMNDC1O75940 238 aaKnown RBP eCLIP15.52■□□□□ 0.07
NDFIP2-201ENST00000218652 ST8SIA6P61647 398 aa15.52■□□□□ 0.07
NDFIP2-201ENST00000218652 GRB10Q13322 594 aa15.52■□□□□ 0.07
NDFIP2-201ENST00000218652 HEATR4Q86WZ0 1026 aa15.52■□□□□ 0.07
NDFIP2-201ENST00000218652 DDX50Q9BQ39 737 aaKnown RBP15.52■□□□□ 0.07
NDFIP2-201ENST00000218652 PLA2G12BQ9BX93 195 aa15.52■□□□□ 0.07
NDFIP2-201ENST00000218652 SLC7A5P2Q9GIP4 190 aa15.52■□□□□ 0.07
NDFIP2-201ENST00000218652 ROGDIQ9GZN7 287 aa15.52■□□□□ 0.07
NDFIP2-201ENST00000218652 CATSPERBQ9H7T0 1116 aa15.52■□□□□ 0.07
NDFIP2-201ENST00000218652 GPATCH2LQ9NWQ4 482 aa15.52■□□□□ 0.07
NDFIP2-201ENST00000218652 LSM7Q9UK45 103 aaKnown RBP15.52■□□□□ 0.07
NDFIP2-201ENST00000218652 BAZ2BQ9UIF8 2168 aaKnown RBP15.52■□□□□ 0.07
NDFIP2-201ENST00000218652 DLGAP3O95886 979 aa15.52■□□□□ 0.07
NDFIP2-201ENST00000218652 CSF1RP07333 972 aa15.52■□□□□ 0.07
NDFIP2-201ENST00000218652 PRIM2P49643 509 aa15.52■□□□□ 0.07
NDFIP2-201ENST00000218652 ZNF772Q68DY9 489 aaPredicted RBP15.52■□□□□ 0.07
NDFIP2-201ENST00000218652 DENND5BQ6ZUT9 1274 aa15.52■□□□□ 0.07
NDFIP2-201ENST00000218652 RNF181Q9P0P0 153 aa15.52■□□□□ 0.07
NDFIP2-201ENST00000218652 TBX20Q9UMR3 447 aa15.52■□□□□ 0.07
NDFIP2-201ENST00000218652 PRG3Q9Y2Y8 225 aaPredicted RBP15.52■□□□□ 0.07
NDFIP2-201ENST00000218652 MSH4O15457 936 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 GLRA3O75311 464 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 SOAT2O75908 522 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 TOMM70O94826 608 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 CYP2C9P11712 490 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 CHRNB3Q05901 458 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 SLC20A2Q08357 652 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 WASHC5Q12768 1159 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 LAMB3Q13751 1172 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 STRIP1Q5VSL9 837 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 C11orf96Q7Z7L8 435 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 PAFAH2Q99487 392 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 SH3GL2Q99962 352 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 C10orf88Q9H8K7 445 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 CSDE1O75534 798 aaKnown RBP15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 ALDH1A1P00352 501 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 PRLRP16471 622 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 CRYMQ14894 314 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 GPR141Q7Z602 305 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 STRNO43815 780 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 NPTXRO95502 500 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 CLPTM1O96005 669 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 ITGA4P13612 1032 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 CYP11B1P15538 503 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 SARSP49591 514 aaKnown RBP15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 BMPR2Q13873 1038 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 RASA2Q15283 850 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 OASLQ15646 514 aaKnown RBP15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 MFSD14CQ5VZR4 134 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 MIER2Q8N344 545 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 ZNF280CQ8ND82 737 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 ZSWIM2Q8NEG5 633 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 C6orf203Q9P0P8 240 aaPredicted RBP15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 CRLS1Q9UJA2 301 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 AP4S1Q9Y587 144 aa15.51■□□□□ 0.07
NDFIP2-201ENST00000218652 PLEKHG2Q9H7P9 1386 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms