RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 RAB27AP51159 221 aa18.31■□□□□ 0.52
VRK1-201ENST00000216639 PLTPP55058 493 aa18.31■□□□□ 0.52
VRK1-201ENST00000216639 LILRA4P59901 499 aa18.31■□□□□ 0.52
VRK1-201ENST00000216639 KRT17Q04695 432 aa18.31■□□□□ 0.52
VRK1-201ENST00000216639 PTK7Q13308 1070 aa18.31■□□□□ 0.52
VRK1-201ENST00000216639 ATP13A4Q4VNC1 1196 aa18.31■□□□□ 0.52
VRK1-201ENST00000216639 PKDCCQ504Y2 493 aa18.31■□□□□ 0.52
VRK1-201ENST00000216639 LRIG3Q6UXM1 1119 aa18.31■□□□□ 0.52
VRK1-201ENST00000216639 FAM183BPQ6ZVS7 135 aa18.31■□□□□ 0.52
VRK1-201ENST00000216639 LIMS2Q7Z4I7 341 aa18.31■□□□□ 0.52
VRK1-201ENST00000216639 TMC3Q7Z5M5 1100 aa18.31■□□□□ 0.52
VRK1-201ENST00000216639 ADGRF2Q8IZF7 708 aa18.31■□□□□ 0.52
VRK1-201ENST00000216639 KBTBD7Q8WVZ9 684 aa18.31■□□□□ 0.52
VRK1-201ENST00000216639 CCDC114Q96M63 670 aa18.31■□□□□ 0.52
VRK1-201ENST00000216639 SLC4A5Q9BY07 1137 aa18.31■□□□□ 0.52
VRK1-201ENST00000216639 GOLGA2P5Q9HBQ8 144 aa18.31■□□□□ 0.52
VRK1-201ENST00000216639 ZDHHC18Q9NUE0 388 aa18.31■□□□□ 0.52
VRK1-201ENST00000216639 KLHL11Q9NVR0 708 aa18.31■□□□□ 0.52
VRK1-201ENST00000216639 GIT1Q9Y2X7 761 aa18.31■□□□□ 0.52
VRK1-201ENST00000216639 PI4K2BG5E9Z4 385 aa18.3■□□□□ 0.52
VRK1-201ENST00000216639 GNRH1P01148 92 aa18.3■□□□□ 0.52
VRK1-201ENST00000216639 THP07101 528 aa18.3■□□□□ 0.52
VRK1-201ENST00000216639 WARSP23381 471 aaKnown RBP18.3■□□□□ 0.52
VRK1-201ENST00000216639 HSD17B3P37058 310 aa18.3■□□□□ 0.52
VRK1-201ENST00000216639 RPL21P46778 160 aaKnown RBP18.3■□□□□ 0.52
VRK1-201ENST00000216639 ZNF143P52747 638 aaPredicted RBP18.3■□□□□ 0.52
VRK1-201ENST00000216639 BCAT1P54687 386 aa18.3■□□□□ 0.52
VRK1-201ENST00000216639 SLC25A11Q02978 314 aaKnown RBP18.3■□□□□ 0.52
VRK1-201ENST00000216639 DHX9Q08211 1270 aaKnown RBP18.3■□□□□ 0.52
VRK1-201ENST00000216639 BST2Q10589 180 aaKnown RBP18.3■□□□□ 0.52
VRK1-201ENST00000216639 MFSD7Q6UXD7 560 aa18.3■□□□□ 0.52
VRK1-201ENST00000216639 TMEM110Q86TL2 294 aa18.3■□□□□ 0.52
VRK1-201ENST00000216639 TTC30AQ86WT1 665 aa18.3■□□□□ 0.52
VRK1-201ENST00000216639 ANKRD52Q8NB46 1076 aa18.3■□□□□ 0.52
VRK1-201ENST00000216639 RAET1EQ8TD07 263 aa18.3■□□□□ 0.52
VRK1-201ENST00000216639 SLC35F5Q8WV83 523 aa18.3■□□□□ 0.52
VRK1-201ENST00000216639 ATG4AQ8WYN0 398 aa18.3■□□□□ 0.52
VRK1-201ENST00000216639 RIN2Q8WYP3 895 aaPredicted RBP18.3■□□□□ 0.52
VRK1-201ENST00000216639 PKNOX2Q96KN3 472 aa18.3■□□□□ 0.52
VRK1-201ENST00000216639 ZFP42Q96MM3 310 aa18.3■□□□□ 0.52
VRK1-201ENST00000216639 HERPUD2Q9BSE4 406 aa18.3■□□□□ 0.52
VRK1-201ENST00000216639 CNPY3Q9BT09 278 aa18.3■□□□□ 0.52
VRK1-201ENST00000216639 TSPYL2Q9H2G4 693 aaPredicted RBP18.3■□□□□ 0.52
VRK1-201ENST00000216639 EFR3BQ9Y2G0 817 aa18.3■□□□□ 0.52
VRK1-201ENST00000216639 PDGFRBP09619 1106 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 PCK1P35558 622 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 MLH1P40692 756 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 RGS7P49802 495 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 ITGA7Q13683 1181 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 PTK6Q13882 451 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 MAP3K21Q5TCX8 1036 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 KAZNQ674X7 775 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 PMF1Q6P1K2 205 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 PIAS4Q8N2W9 510 aaPredicted RBP18.29■□□□□ 0.52
VRK1-201ENST00000216639 UBLCP1Q8WVY7 318 aaPredicted RBP18.29■□□□□ 0.52
VRK1-201ENST00000216639 NCAPGQ9BPX3 1015 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 DPEP3Q9H4B8 488 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 ZWILCHQ9H900 591 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 CYLDQ9NQC7 956 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 CREBZFQ9NS37 354 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 GRHL1Q9NZI5 618 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 WHRNQ9P202 907 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 ASIC3Q9UHC3 531 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 ADAM21Q9UKJ8 722 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 R3HDM2Q9Y2K5 976 aaKnown RBP18.29■□□□□ 0.52
VRK1-201ENST00000216639 NME7Q9Y5B8 376 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 hCG_1818297A0A087WSY0 165 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 GOLGA6L10A6NI86 522 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 PPFIA2O75334 1257 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 FGFR1P11362 822 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 PDGFRAP16234 1089 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 SLC8A3P57103 927 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 CAP1Q01518 475 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 SLC6A3Q01959 620 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 PDE4CQ08493 712 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 ZDHHC24Q6UX98 284 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 ZNF365Q70YC5 407 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 CD99L2Q8TCZ2 262 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 PXYLP1Q8TE99 480 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 RAPGEF5Q92565 580 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 EXOC4Q96A65 974 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 TRAIPQ9BWF2 469 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 PADI3Q9ULW8 664 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 PLAAQ9Y263 795 aa18.29■□□□□ 0.52
VRK1-201ENST00000216639 GRIN2DO15399 1336 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 GOLGA6CA6NDK9 693 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 C2CD4BA6NLJ0 364 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 CYB561D2O14569 222 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 TRPA1O75762 1119 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 GOLGA6DP0CG33 693 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 SKIP12755 728 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 KRT10P13645 584 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 ITIH2P19823 946 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 FLT3P36888 993 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 CDKN2BP42772 138 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 ACADSBP45954 432 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 CAV1Q03135 178 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 TXNRD3NBQ6F5E7 133 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 DRICH1Q6PGQ1 229 aaPredicted RBP18.28■□□□□ 0.52
VRK1-201ENST00000216639 MRPL10Q7Z7H8 261 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms