RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 PPANQ9NQ55 473 aaKnown RBP9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 AVENQ9NQS1 362 aaPredicted RBP9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 BATF3Q9NR55 127 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 PLSCR2Q9NRY7 297 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 NOD1Q9Y239 953 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 PCDHA3Q9Y5H8 950 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 SMIM35A0A1B0GVV1 85 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 GMNCA6NCL1 334 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 PI4K2BG5E9Z4 385 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 E2F6O75461 281 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 SKAP2O75563 359 aaPredicted RBP9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 FAM153BP0C7A2 387 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 DARSP14868 501 aaKnown RBP9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 FLT3LGP49771 235 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 RPL7AP62424 266 aaKnown RBP9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 SNCBQ16143 134 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 PPP2R5EQ16537 467 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 FAM153CQ494X1 144 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 DENND1BQ6P3S1 775 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 CCDC137Q6PK04 289 aaKnown RBP9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 CCDC80Q76M96 950 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 ARHGAP22Q7Z5H3 698 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 MFN1Q8IWA4 741 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 SPOCK2Q92563 424 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 TMEM176AQ96HP8 235 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 PHACTR1Q9C0D0 580 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 NACA2Q9H009 215 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 ERVK-5Q9HDB9 667 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 FAM153AQ9UHL3 310 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 RABL2BQ9UNT1 228 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 SNX24Q9Y343 169 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 RECQL4O94761 1208 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 PROSCO94903 275 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 EZRP15311 586 aaKnown RBP9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 CTNNA1P35221 906 aaKnown RBP9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 GRM5P41594 1212 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 SLC1A1P43005 524 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 VPS41P49754 854 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 NDST1P52848 882 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 PTPN11Q06124 597 aaPredicted RBP9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 C1QBPQ07021 282 aaKnown RBP9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 LRRC23Q53EV4 343 aaPredicted RBP9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 LRIG3Q6UXM1 1119 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 SLC13A5Q86YT5 568 aaPredicted RBP9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 RHOT1Q8IXI2 618 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 LINC01465Q8N7H1 131 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 EIF1ADQ8N9N8 165 aaKnown RBP9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 C18orf25Q96B23 403 aaPredicted RBP9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 LRRC45Q96CN5 670 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 FAM118BQ9BPY3 351 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 TRIM4Q9C037 500 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 SLC40A1Q9NP59 571 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 FAM49BQ9NUQ9 324 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 HMGXB4Q9UGU5 601 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 IP6K2Q9UHH9 426 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 ITGA11Q9UKX5 1188 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 TMEM98Q9Y2Y6 226 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 TCRBV7S2A1N4TA0A589 114 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 ATP6V1G1O75348 118 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 MTA2O94776 668 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 RARBP10826 455 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 HSPA6P17066 643 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 PSMA2P25787 234 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 ATICP31939 592 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 HPDP32754 393 aaPredicted RBP9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 MAGEA10P43363 369 aaPredicted RBP9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 PLTPP55058 493 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 PLCB3Q01970 1234 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 MPP3Q13368 585 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 SNX17Q15036 470 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 C6orf89Q6UWU4 347 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 GSTA5Q7RTV2 222 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 RSPH3Q86UC2 560 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 PHF13Q86YI8 300 aaPredicted RBP9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 ACSF2Q96CM8 615 aaPredicted RBP9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 VCPIP1Q96JH7 1222 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 EPAS1Q99814 870 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 ADAMTS10Q9H324 1103 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 GABRQQ9UN88 632 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 PLAAQ9Y263 795 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 AHCYL1O43865 530 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 KRT1P04264 644 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 PDGFRBP09619 1106 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 KRT3P12035 628 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 MMP8P22894 467 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 PEX5P50542 639 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 CUL1Q13616 776 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 E2F5Q15329 346 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 TRIP13Q15645 432 aaPredicted RBP9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 OR6B2Q6IFH4 312 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 CCDC25Q86WR0 208 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 CEP57Q86XR8 500 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 CACTIN-AS1Q8N1I8 211 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 TWNKQ96RR1 684 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 SDCBP2Q9H190 292 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 ZWILCHQ9H900 591 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 TMBIM4Q9HC24 238 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 TUBGCP4Q9UGJ1 667 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 ASIC3Q9UHC3 531 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 TMEM59LQ9UK28 342 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms