RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 ZNF222Q9UK12 451 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 HARS2P49590 506 aaKnown RBP15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 FLAD1Q8NFF5 587 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 MMP19Q99542 508 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 SH2B2O14492 632 aaPredicted RBP15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 PGM3O95394 542 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 BAG6P46379 1132 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 ALDH9A1P49189 494 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 DCAF6Q58WW2 860 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 LRRC1Q9BTT6 524 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 FBXO40Q9UH90 709 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 CHKBQ9Y259 395 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 PNMA8CA0A1B0GUJ8 204 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 KPNA5O15131 536 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 CYP2D6P10635 497 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 CASP4P49662 377 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 KCNT1Q5JUK3 1230 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 SLC7A14Q8TBB6 771 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 MNTQ99583 582 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 CCDC3Q9BQI4 270 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 PAIP1Q9H074 479 aaKnown RBP15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 CHURC1-FNTBB4DL54 471 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 WEE2P0C1S8 567 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 SLC9A6Q92581 669 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 PPP2R3CQ969Q6 453 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 GABBR1Q9UBS5 961 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 PARD3Q8TEW0 1356 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 CCT8L1PA6NM43 557 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 KCTD14Q9BQ13 255 aaPredicted RBP15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 H3BN98 237 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 CYP26A1O43174 497 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 S100GP29377 79 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 PPP2R1BP30154 601 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 CASP12Q6UXS9 341 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 HMG20AQ9NP66 347 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 POTECB2RU33 542 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 ERN1O75460 977 aaKnown RBP15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 TCEA3O75764 348 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 KCNJ6P48051 423 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 CDK8P49336 464 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 PHACTR4Q8IZ21 702 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 EID3Q8N140 333 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 CAPSLQ8WWF8 208 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 MTA3Q9BTC8 594 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 NEUROD4Q9HD90 331 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 MCUBQ9NWR8 336 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 UHRF1BP1Q6BDS2 1440 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 PDS5AQ29RF7 1337 aaKnown RBP15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 EXTL3O43909 919 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 HSD3B2P26439 372 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 ZNF560Q96MR9 790 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 SNRPAP09012 282 aaKnown RBP15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 ADD2P35612 726 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 INTS2Q9H0H0 1204 aaKnown RBP15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 SH3GLB2Q9NR46 395 aa15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 RUVBL2Q9Y230 463 aaKnown RBP15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 PIN4Q9Y237 131 aaKnown RBP15.13■□□□□ 0.01
SPTLC2-201ENST00000216484 TTLL9Q3SXZ7 439 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 ZMYM1Q5SVZ6 1142 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 RAD54LQ92698 747 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 E2F7Q96AV8 911 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 FAM49BQ9NUQ9 324 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 ANO9A1A5B4 782 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 FAM25EA8MYX2 175 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 CLUP10909 449 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 SCUBE1Q8IWY4 988 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 KRT35Q92764 455 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 GMEB1Q9Y692 573 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 C2orf81A6NN90 581 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 UPP2O95045 317 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 ADRM1Q16186 407 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 SERAC1Q96JX3 654 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 APOL4Q9BPW4 351 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 RHOBTB2Q9BYZ6 727 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 FKBP14Q9NWM8 211 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 SLC9A8Q9Y2E8 581 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 ADGBQ8N7X0 1667 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 ARID1BQ8NFD5 2236 aaPredicted RBP15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 SMIM22K7EJ46 135 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 ALDH1A3P47895 512 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 MIIPQ5JXC2 388 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 WBP11Q9Y2W2 641 aaKnown RBP15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 SEMA3DO95025 777 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 ATG7O95352 703 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 NEDD8Q15843 81 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 KYAT1Q16773 422 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 LXNQ9BS40 222 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 VCLP18206 1134 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 PSMD4P55036 377 aaKnown RBP15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 MCCD1P59942 119 aaPredicted RBP15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 ITGB3BPQ13352 177 aaPredicted RBP15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 WDR60Q8WVS4 1066 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 FAM136AQ96C01 138 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 SGSM3Q96HU1 749 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 AIFM3Q96NN9 605 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 ELL3Q9HB65 397 aaPredicted RBP15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 COMMD8Q9NX08 183 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 SYNPO2Q9UMS6 1093 aa15.12■□□□□ 0.01
SPTLC2-201ENST00000216484 TRAF3Q13114 568 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 ERMARDQ5T6L9 678 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms