RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 CNNM4Q6P4Q7 775 aa16.05■□□□□ 0.16
UPK3A-201ENST00000216211 PKN3Q6P5Z2 889 aa16.05■□□□□ 0.16
UPK3A-201ENST00000216211 UNC13DQ70J99 1090 aa16.05■□□□□ 0.16
UPK3A-201ENST00000216211 TRAPPC11Q7Z392 1133 aa16.05■□□□□ 0.16
UPK3A-201ENST00000216211 TTC16Q8NEE8 873 aa16.05■□□□□ 0.16
UPK3A-201ENST00000216211 SCFD1Q8WVM8 642 aa16.05■□□□□ 0.16
UPK3A-201ENST00000216211 MYLPFQ96A32 169 aa16.05■□□□□ 0.16
UPK3A-201ENST00000216211 CHFRQ96EP1 664 aa16.05■□□□□ 0.16
UPK3A-201ENST00000216211 MYRFLQ96LU7 910 aa16.05■□□□□ 0.16
UPK3A-201ENST00000216211 SLC22A12Q96S37 553 aa16.05■□□□□ 0.16
UPK3A-201ENST00000216211 CYP2S1Q96SQ9 504 aa16.05■□□□□ 0.16
UPK3A-201ENST00000216211 MMS19Q96T76 1030 aa16.05■□□□□ 0.16
UPK3A-201ENST00000216211 CRTAC1Q9NQ79 661 aa16.05■□□□□ 0.16
UPK3A-201ENST00000216211 CDH9Q9ULB4 789 aa16.05■□□□□ 0.16
UPK3A-201ENST00000216211 UBE4BO95155 1302 aa16.04■□□□□ 0.16
UPK3A-201ENST00000216211 MED19A0JLT2 244 aaPredicted RBP16.04■□□□□ 0.16
UPK3A-201ENST00000216211 F13A1P00488 732 aa16.04■□□□□ 0.16
UPK3A-201ENST00000216211 CST3P01034 146 aaPredicted RBP16.04■□□□□ 0.16
UPK3A-201ENST00000216211 TNNI1P19237 187 aa16.04■□□□□ 0.16
UPK3A-201ENST00000216211 TGM1P22735 817 aa16.04■□□□□ 0.16
UPK3A-201ENST00000216211 WARSP23381 471 aaKnown RBP16.04■□□□□ 0.16
UPK3A-201ENST00000216211 MAGEA11P43364 429 aa16.04■□□□□ 0.16
UPK3A-201ENST00000216211 EHHADHQ08426 723 aa16.04■□□□□ 0.16
UPK3A-201ENST00000216211 SPEM2Q0P670 501 aa16.04■□□□□ 0.16
UPK3A-201ENST00000216211 SIM2Q14190 667 aaPredicted RBP16.04■□□□□ 0.16
UPK3A-201ENST00000216211 LAIR1Q6GTX8 287 aa16.04■□□□□ 0.16
UPK3A-201ENST00000216211 FSTL4Q6MZW2 842 aa16.04■□□□□ 0.16
UPK3A-201ENST00000216211 CC2D1AQ6P1N0 951 aaPredicted RBP16.04■□□□□ 0.16
UPK3A-201ENST00000216211 C4orf50Q6ZRC1 276 aa16.04■□□□□ 0.16
UPK3A-201ENST00000216211 LONP2Q86WA8 852 aa16.04■□□□□ 0.16
UPK3A-201ENST00000216211 SYNPOQ8N3V7 929 aa16.04■□□□□ 0.16
UPK3A-201ENST00000216211 ARL14EPQ8N8R7 260 aaPredicted RBP16.04■□□□□ 0.16
UPK3A-201ENST00000216211 FNBP1Q96RU3 617 aa16.04■□□□□ 0.16
UPK3A-201ENST00000216211 CGRRF1Q99675 332 aa16.04■□□□□ 0.16
UPK3A-201ENST00000216211 SLC39A2Q9NP94 309 aa16.04■□□□□ 0.16
UPK3A-201ENST00000216211 PCDHA7Q9UN72 937 aa16.04■□□□□ 0.16
UPK3A-201ENST00000216211 SPAG17Q6Q759 2223 aa16.04■□□□□ 0.16
UPK3A-201ENST00000216211 TRAV19A0A0A6YYK7 116 aa16.03■□□□□ 0.16
UPK3A-201ENST00000216211 C2orf78A6NCI8 922 aa16.03■□□□□ 0.16
UPK3A-201ENST00000216211 CKMP06732 381 aa16.03■□□□□ 0.16
UPK3A-201ENST00000216211 USP17L7P0C7H9 530 aa16.03■□□□□ 0.16
UPK3A-201ENST00000216211 ZSCAN22P10073 491 aaPredicted RBP16.03■□□□□ 0.16
UPK3A-201ENST00000216211 BDNFP23560 247 aa16.03■□□□□ 0.16
UPK3A-201ENST00000216211 AFMP43652 599 aa16.03■□□□□ 0.16
UPK3A-201ENST00000216211 CYP27A1Q02318 531 aa16.03■□□□□ 0.16
UPK3A-201ENST00000216211 FAM160A1Q05DH4 1040 aa16.03■□□□□ 0.16
UPK3A-201ENST00000216211 CYP24A1Q07973 514 aa16.03■□□□□ 0.16
UPK3A-201ENST00000216211 GRSF1Q12849 480 aaKnown RBP eCLIP16.03■□□□□ 0.16
UPK3A-201ENST00000216211 MTF1Q14872 753 aa16.03■□□□□ 0.16
UPK3A-201ENST00000216211 PSMD6Q15008 389 aa16.03■□□□□ 0.16
UPK3A-201ENST00000216211 ZNF77Q15935 545 aa16.03■□□□□ 0.16
UPK3A-201ENST00000216211 TMEM196Q5HYL7 178 aa16.03■□□□□ 0.16
UPK3A-201ENST00000216211 XXYLT1Q8NBI6 393 aa16.03■□□□□ 0.16
UPK3A-201ENST00000216211 CCDC127Q96BQ5 260 aa16.03■□□□□ 0.16
UPK3A-201ENST00000216211 GBP4Q96PP9 640 aa16.03■□□□□ 0.16
UPK3A-201ENST00000216211 MRPL45Q9BRJ2 306 aaKnown RBP16.03■□□□□ 0.16
UPK3A-201ENST00000216211 MAGEF1Q9HAY2 307 aa16.03■□□□□ 0.16
UPK3A-201ENST00000216211 FBRSL1Q9HCM7 1045 aaKnown RBP16.03■□□□□ 0.16
UPK3A-201ENST00000216211 ZDHHC9Q9Y397 364 aa16.03■□□□□ 0.16
UPK3A-201ENST00000216211 NME7Q9Y5B8 376 aa16.03■□□□□ 0.16
UPK3A-201ENST00000216211 MYH10P35580 1976 aa16.03■□□□□ 0.16
UPK3A-201ENST00000216211 TRDMT1O14717 391 aaKnown RBP16.02■□□□□ 0.16
UPK3A-201ENST00000216211 EGFP01133 1207 aa16.02■□□□□ 0.16
UPK3A-201ENST00000216211 GRIK1P39086 918 aa16.02■□□□□ 0.16
UPK3A-201ENST00000216211 ME1P48163 572 aa16.02■□□□□ 0.16
UPK3A-201ENST00000216211 USP4Q13107 963 aa16.02■□□□□ 0.16
UPK3A-201ENST00000216211 CUL4BQ13620 913 aa16.02■□□□□ 0.16
UPK3A-201ENST00000216211 PDGFRLQ15198 375 aa16.02■□□□□ 0.16
UPK3A-201ENST00000216211 MDH1BQ5I0G3 518 aa16.02■□□□□ 0.16
UPK3A-201ENST00000216211 NAIF1Q69YI7 327 aaPredicted RBP16.02■□□□□ 0.16
UPK3A-201ENST00000216211 WDR5BQ86VZ2 330 aa16.02■□□□□ 0.16
UPK3A-201ENST00000216211 GRAMD1CQ8IYS0 662 aa16.02■□□□□ 0.16
UPK3A-201ENST00000216211 FSIP1Q8NA03 581 aa16.02■□□□□ 0.16
UPK3A-201ENST00000216211 ZNF516Q92618 1163 aa16.02■□□□□ 0.16
UPK3A-201ENST00000216211 SPATA17Q96L03 361 aa16.02■□□□□ 0.16
UPK3A-201ENST00000216211 SNX25Q9H3E2 840 aa16.02■□□□□ 0.16
UPK3A-201ENST00000216211 DUS2Q9NX74 493 aaKnown RBP16.02■□□□□ 0.16
UPK3A-201ENST00000216211 FAM13BQ9NYF5 915 aa16.02■□□□□ 0.16
UPK3A-201ENST00000216211 GCNT4Q9P109 453 aa16.02■□□□□ 0.16
UPK3A-201ENST00000216211 WNT6Q9Y6F9 365 aa16.02■□□□□ 0.16
UPK3A-201ENST00000216211 PRR5-ARHGAP8B1AHC4 643 aa16.01■□□□□ 0.15
UPK3A-201ENST00000216211 RETP07949 1114 aa16.01■□□□□ 0.15
UPK3A-201ENST00000216211 PDIA4P13667 645 aaKnown RBP16.01■□□□□ 0.15
UPK3A-201ENST00000216211 ANXA13P27216 316 aa16.01■□□□□ 0.15
UPK3A-201ENST00000216211 CNR2P34972 360 aa16.01■□□□□ 0.15
UPK3A-201ENST00000216211 GJA4P35212 333 aa16.01■□□□□ 0.15
UPK3A-201ENST00000216211 GNL1P36915 607 aaPredicted RBP16.01■□□□□ 0.15
UPK3A-201ENST00000216211 IFNAR2P48551 515 aa16.01■□□□□ 0.15
UPK3A-201ENST00000216211 PXNP49023 591 aaPredicted RBP16.01■□□□□ 0.15
UPK3A-201ENST00000216211 GALK1P51570 392 aa16.01■□□□□ 0.15
UPK3A-201ENST00000216211 ATXN1P54253 815 aaKnown RBP16.01■□□□□ 0.15
UPK3A-201ENST00000216211 USP46P62068 366 aa16.01■□□□□ 0.15
UPK3A-201ENST00000216211 SNRPFP62306 86 aaKnown RBP16.01■□□□□ 0.15
UPK3A-201ENST00000216211 ARHGAP8P85298 464 aa16.01■□□□□ 0.15
UPK3A-201ENST00000216211 LMNB2Q03252 620 aa16.01■□□□□ 0.15
UPK3A-201ENST00000216211 PKP1Q13835 747 aa16.01■□□□□ 0.15
UPK3A-201ENST00000216211 KCNB1Q14721 858 aa16.01■□□□□ 0.15
UPK3A-201ENST00000216211 MAPRE1Q15691 268 aaKnown RBP16.01■□□□□ 0.15
UPK3A-201ENST00000216211 BMT2Q1RMZ1 405 aa16.01■□□□□ 0.15
UPK3A-201ENST00000216211 WDR72Q3MJ13 1102 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms