RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 PTPN7P35236 360 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 CAV1Q03135 178 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 TAF1CQ15572 869 aaPredicted RBP8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 HADHQ16836 314 aaKnown RBP8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 GOLGA7BQ2TAP0 167 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 CCDC38Q502W7 563 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 PPP1R26Q5T8A7 1209 aaPredicted RBP8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 FAM183BPQ6ZVS7 135 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 SRLQ86TD4 932 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 ACOT1Q86TX2 421 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 ALLCQ8N6M5 410 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 SELENOSQ9BQE4 189 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 GJD2Q9UKL4 321 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 RRP15Q9Y3B9 282 aaKnown RBP8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 NME7Q9Y5B8 376 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 SMIM35A0A1B0GVV1 85 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 MBLAC1A4D2B0 266 aaPredicted RBP8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 HCRTO43612 131 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 STAU1O95793 577 aaKnown RBP8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 IFNB1P01574 187 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 PFKMP08237 780 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 MYL3P08590 195 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 MIPP30301 263 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 VCPP55072 806 aaKnown RBP8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 LMNB2Q03252 620 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 GPS1Q13098 491 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 OASLQ15646 514 aaKnown RBP8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 CDO1Q16878 200 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 RAB6CQ53S08 254 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 C6orf118Q5T5N4 469 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 OR6B2Q6IFH4 312 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 LCLAT1Q6UWP7 414 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 RAB6CQ9H0N0 254 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 C10orf88Q9H8K7 445 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 KLK14Q9P0G3 267 aa8.39□□□□□ -1.07
HMGXB4-201ENST00000216106 SGK1O00141 431 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 CST8O60676 142 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 RNF8O76064 485 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 TTC4O95801 387 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 KDELR1P24390 212 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 OTUD4Q01804 1114 aaKnown RBP8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 AUHQ13825 339 aaKnown RBP8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 C15orf59Q2T9L4 293 aaPredicted RBP8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 TRNP1Q6NT89 227 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 DRICH1Q6PGQ1 229 aaPredicted RBP8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 NLRP14Q86W24 1093 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 MYCBPAPQ8TBZ2 947 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 C9orf72Q96LT7 481 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 LPIN3Q9BQK8 851 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 ADAM7Q9H2U9 754 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 PLEKHA5Q9HAU0 1116 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 USP18Q9UMW8 372 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 EBAG9O00559 213 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 PSEN2P49810 448 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 SMYD5Q6GMV2 418 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 HIBCHQ6NVY1 386 aaPredicted RBP8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 APBB1IPQ7Z5R6 666 aaPredicted RBP8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 SESTD1Q86VW0 696 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 TTC30AQ86WT1 665 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 KCTD6Q8NC69 237 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 BBOF1Q8ND07 529 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 BEST2Q8NFU1 509 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 ACTL9Q8TC94 416 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 PEBP4Q96S96 227 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 CALN1Q9BXU9 219 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 TSPYL1Q9H0U9 437 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 NINJ2Q9NZG7 142 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 CTNNAL1Q9UBT7 734 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 AGTP01019 485 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 ZNF157P51786 506 aaPredicted RBP8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 SNX17Q15036 470 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 PMF1Q6P1K2 205 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 ZNF473Q8WTR7 871 aaKnown RBP8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 CCT8L2Q96SF2 557 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 RBM15Q96T37 977 aaKnown RBP eCLIP8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 TMEM109Q9BVC6 243 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 DPEP3Q9H4B8 488 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 GOLGA2P5Q9HBQ8 144 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 DNALI1O14645 258 aaPredicted RBP8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 PDGFRAP16234 1089 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 GPD1P21695 349 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 GDF10P55107 478 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 ZBTB6Q15916 424 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 CYP4F22Q6NT55 531 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 RASAL3Q86YV0 1011 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 OR6B3Q8NGW1 331 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 RXFP2Q8WXD0 754 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 RNF39Q9H2S5 420 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 CNOT10Q9H9A5 744 aaKnown RBP8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 CNTN3Q9P232 1028 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 DERAQ9Y315 318 aa8.38□□□□□ -1.07
HMGXB4-201ENST00000216106 C2CD4BA6NLJ0 364 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 TRAPPC3O43617 180 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 TRUB2O95900 331 aaKnown RBP8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 ITGAVP06756 1048 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 CHN1P15882 459 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 MMP13P45452 471 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 CPT1AP50416 773 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 ZNF143P52747 638 aaPredicted RBP8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 ADAM17P78536 824 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms