RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 NETO2Q8NC67 525 aa8.69□□□□□ -1.02
CDC27-201ENST00000066544 PIWIL1Q96J94 861 aaKnown RBP8.69□□□□□ -1.02
CDC27-201ENST00000066544 HEXIM2Q96MH2 286 aaKnown RBP8.69□□□□□ -1.02
CDC27-201ENST00000066544 TTC25Q96NG3 672 aa8.69□□□□□ -1.02
CDC27-201ENST00000066544 ACO2Q99798 780 aaKnown RBP8.69□□□□□ -1.02
CDC27-201ENST00000066544 IKBKGQ9Y6K9 419 aa8.69□□□□□ -1.02
CDC27-201ENST00000066544 SOWAHBA6NEL2 793 aa8.69□□□□□ -1.02
CDC27-201ENST00000066544 RNF8O76064 485 aa8.69□□□□□ -1.02
CDC27-201ENST00000066544 KDELR1P24390 212 aa8.69□□□□□ -1.02
CDC27-201ENST00000066544 ELK3P41970 407 aa8.69□□□□□ -1.02
CDC27-201ENST00000066544 RFX8Q6ZV50 586 aa8.69□□□□□ -1.02
CDC27-201ENST00000066544 MTDHQ86UE4 582 aaKnown RBP8.69□□□□□ -1.02
CDC27-201ENST00000066544 FBXO16Q8IX29 292 aaPredicted RBP8.69□□□□□ -1.02
CDC27-201ENST00000066544 ZNF75CPQ92670 426 aaPredicted RBP8.69□□□□□ -1.02
CDC27-201ENST00000066544 SDCBP2Q9H190 292 aa8.69□□□□□ -1.02
CDC27-201ENST00000066544 USH1CQ9Y6N9 552 aa8.69□□□□□ -1.02
CDC27-201ENST00000066544 CFAP69A5D8W1 941 aa8.69□□□□□ -1.02
CDC27-201ENST00000066544 UNC5CO95185 931 aa8.69□□□□□ -1.02
CDC27-201ENST00000066544 ERBB2P04626 1255 aa8.69□□□□□ -1.02
CDC27-201ENST00000066544 HOXC6P09630 235 aa8.69□□□□□ -1.02
CDC27-201ENST00000066544 POLR2BP30876 1174 aaKnown RBP8.69□□□□□ -1.02
CDC27-201ENST00000066544 ZNF132P52740 706 aa8.69□□□□□ -1.02
CDC27-201ENST00000066544 IRX4P78413 519 aa8.69□□□□□ -1.02
CDC27-201ENST00000066544 MCL1Q07820 350 aa8.69□□□□□ -1.02
CDC27-201ENST00000066544 ATF7IP2Q5U623 682 aa8.69□□□□□ -1.02
CDC27-201ENST00000066544 ATP11CQ8NB49 1132 aa8.69□□□□□ -1.02
CDC27-201ENST00000066544 SLC35B2Q8TB61 432 aa8.69□□□□□ -1.02
CDC27-201ENST00000066544 UTP4Q969X6 686 aaKnown RBP8.69□□□□□ -1.02
CDC27-201ENST00000066544 ANKRD36BP1Q96IX9 119 aa8.69□□□□□ -1.02
CDC27-201ENST00000066544 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.69□□□□□ -1.02
CDC27-201ENST00000066544 ZNF646O15015 1829 aaPredicted RBP8.68□□□□□ -1.02
CDC27-201ENST00000066544 GEMIN4P57678 1058 aaKnown RBP8.68□□□□□ -1.02
CDC27-201ENST00000066544 ZNF280AP59817 542 aaPredicted RBP8.68□□□□□ -1.02
CDC27-201ENST00000066544 MKRN3Q13064 507 aaKnown RBP8.68□□□□□ -1.02
CDC27-201ENST00000066544 TAF1BQ53T94 588 aaPredicted RBP8.68□□□□□ -1.02
CDC27-201ENST00000066544 PPP6R3Q5H9R7 873 aaPredicted RBP8.68□□□□□ -1.02
CDC27-201ENST00000066544 FAM160B1Q5W0V3 765 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 NLRP9Q7RTR0 991 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 PPM1NQ8N819 430 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.68□□□□□ -1.02
CDC27-201ENST00000066544 DENND1AQ8TEH3 1009 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 PTPRN2Q92932 1015 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 KLRG1Q96E93 195 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 WDR83Q9BRX9 315 aaKnown RBP8.68□□□□□ -1.02
CDC27-201ENST00000066544 NR2E3Q9Y5X4 410 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 EDF1O60869 148 aaKnown RBP8.68□□□□□ -1.02
CDC27-201ENST00000066544 RFWD2Q8NHY2 731 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 CCHCR1Q8TD31 782 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 NKD2Q969F2 451 aaPredicted RBP8.68□□□□□ -1.02
CDC27-201ENST00000066544 CPB2Q96IY4 423 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 FAM111AQ96PZ2 611 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 XYLT2Q9H1B5 865 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 ARHGEF3Q9NR81 526 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 NOP53Q9NZM5 478 aaKnown RBP8.68□□□□□ -1.02
CDC27-201ENST00000066544 KCNG1Q9UIX4 513 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 RABGEF1Q9UJ41 708 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 SHOC2Q9UQ13 582 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 MCF2LO15068 1137 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 PIGRP01833 764 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 MT-ND3P03897 115 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 ASPAP45381 313 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 LONP2Q86WA8 852 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 PPIL6Q8IXY8 311 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 RSRC1Q96IZ7 334 aaKnown RBP8.68□□□□□ -1.02
CDC27-201ENST00000066544 PLCD4Q9BRC7 762 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 RPF1Q9H9Y2 349 aaKnown RBP8.68□□□□□ -1.02
CDC27-201ENST00000066544 RAB6BQ9NRW1 208 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 CPSF3Q9UKF6 684 aaKnown RBP8.68□□□□□ -1.02
CDC27-201ENST00000066544 CCDC195A0A1B0GUA6 201 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 TCRBV5S1A1TA0A578 114 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 ABHD2P08910 425 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 CPA2P48052 419 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 PDK4Q16654 411 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 KBTBD12Q3ZCT8 623 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 PLEKHG4Q58EX7 1191 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 MOB2Q70IA6 237 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 CCDC125Q86Z20 511 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 C12orf29Q8N999 325 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 OTUD5Q96G74 571 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 PRR11Q96HE9 360 aaPredicted RBP8.68□□□□□ -1.02
CDC27-201ENST00000066544 ADPGKQ9BRR6 497 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 FBXO6Q9NRD1 293 aaPredicted RBP8.68□□□□□ -1.02
CDC27-201ENST00000066544 NKX1-2Q9UD57 310 aaPredicted RBP8.68□□□□□ -1.02
CDC27-201ENST00000066544 CNTN6Q9UQ52 1028 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 C15orf41Q9Y2V0 281 aa8.68□□□□□ -1.02
CDC27-201ENST00000066544 MYO18AQ92614 2054 aaKnown RBP8.68□□□□□ -1.02
CDC27-201ENST00000066544 C19orf81C9J6K1 198 aa8.67□□□□□ -1.02
CDC27-201ENST00000066544 KBTBD13C9JR72 458 aa8.67□□□□□ -1.02
CDC27-201ENST00000066544 ENTPD5O75356 428 aa8.67□□□□□ -1.02
CDC27-201ENST00000066544 MAFO75444 373 aaPredicted RBP8.67□□□□□ -1.02
CDC27-201ENST00000066544 FAAP100Q0VG06 881 aa8.67□□□□□ -1.02
CDC27-201ENST00000066544 BMPR2Q13873 1038 aa8.67□□□□□ -1.02
CDC27-201ENST00000066544 TARBP2Q15633 366 aaKnown RBP8.67□□□□□ -1.02
CDC27-201ENST00000066544 MDH1BQ5I0G3 518 aa8.67□□□□□ -1.02
CDC27-201ENST00000066544 ZPBP2Q6X784 338 aa8.67□□□□□ -1.02
CDC27-201ENST00000066544 SPATA33Q96N06 139 aa8.67□□□□□ -1.02
CDC27-201ENST00000066544 NIFKQ9BYG3 293 aaKnown RBP8.67□□□□□ -1.02
CDC27-201ENST00000066544 TXLNGQ9NUQ3 528 aa8.67□□□□□ -1.02
CDC27-201ENST00000066544 FAM49BQ9NUQ9 324 aa8.67□□□□□ -1.02
CDC27-201ENST00000066544 PIH1D1Q9NWS0 290 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms