RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 CCDC62Q6P9F0 684 aa11.02□□□□□ -0.64
CX3CL1-201ENST00000006053 DRICH1Q6PGQ1 229 aaPredicted RBP11.02□□□□□ -0.64
CX3CL1-201ENST00000006053 OR5B17Q8NGF7 314 aa11.02□□□□□ -0.64
CX3CL1-201ENST00000006053 CPT1BQ92523 772 aa11.02□□□□□ -0.64
CX3CL1-201ENST00000006053 ZNF333Q96JL9 665 aa11.02□□□□□ -0.64
CX3CL1-201ENST00000006053 NTPCRQ9BSD7 190 aaKnown RBP11.02□□□□□ -0.64
CX3CL1-201ENST00000006053 XPNPEP1Q9NQW7 623 aa11.02□□□□□ -0.64
CX3CL1-201ENST00000006053 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.02□□□□□ -0.64
CX3CL1-201ENST00000006053 ZNF70Q9UC06 446 aaPredicted RBP11.02□□□□□ -0.64
CX3CL1-201ENST00000006053 IKBKGQ9Y6K9 419 aa11.02□□□□□ -0.64
CX3CL1-201ENST00000006053 H0YIN7 160 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 NRLP54845 237 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 MCL1Q07820 350 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 DLGAP5Q15398 846 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 KLHL38Q2WGJ6 581 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 SLC27A3Q5K4L6 730 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 ADGRD1Q6QNK2 874 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 PPIL6Q8IXY8 311 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 PDCD7Q8N8D1 485 aaKnown RBP11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 WDR60Q8WVS4 1066 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 FAM151AQ8WW52 585 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 TMEM143Q96AN5 459 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 PLEKHG4BQ96PX9 1271 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 PDCD2LQ9BRP1 358 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 MAF1Q9H063 256 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 PIDD1Q9HB75 910 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 LOXHD1Q8IVV2 1947 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 CST8O60676 142 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 ITGAVP06756 1048 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 IMPDH2P12268 514 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 MMP8P22894 467 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 CDKN2BP42772 138 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 MDH1BQ5I0G3 518 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 RNF220Q5VTB9 566 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 TRIM42Q8IWZ5 723 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 BANPQ8N9N5 519 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 TLE6Q9H808 572 aa11.02□□□□□ -0.65
CX3CL1-201ENST00000006053 NRXN2Q9P2S2 1712 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 SPDYE2BA6NHP3 402 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 LRRIQ4A6NIV6 560 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 PLA2G6O60733 806 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 RAD17O75943 681 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 SPDYE6P0CI01 402 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 MYL2P10916 166 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 SP100P23497 879 aaPredicted RBP11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 RPL22P35268 128 aaKnown RBP11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 MCCD1P59942 119 aaPredicted RBP11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 ZNF398Q8TD17 642 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 NRG4Q8WWG1 115 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 ACSS3Q9H6R3 686 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 PPCSQ9HAB8 311 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 UBR3Q6ZT12 1888 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 YDJCA8MPS7 323 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 TM9SF1O15321 606 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 ONECUT3O60422 494 aaPredicted RBP11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 HNRNPCL1O60812 293 aaKnown RBP11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 TBX10O75333 385 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 DGAT1O75907 488 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 PSMG1O95456 288 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 SKIP12755 728 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 YWHAGP61981 247 aaKnown RBP eCLIP11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 CDK16Q00536 496 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 ROR2Q01974 943 aaKnown RBP11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 PTK7Q13308 1070 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 THOC5Q13769 683 aaKnown RBP11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 NCOA4Q13772 614 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 CCDC142Q17RM4 750 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 LRRC74BQ6ZQY2 392 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 PCGF5Q86SE9 256 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 PDIK1LQ8N165 341 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 ZNF276Q8N554 614 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 PPFIBP2Q8ND30 876 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 MCPH1Q8NEM0 835 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 ATP6V0A1Q93050 837 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 NKD2Q969F2 451 aaPredicted RBP11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 WDR83Q9BRX9 315 aaKnown RBP11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 MSTO1Q9BUK6 570 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 TARS2Q9BW92 718 aaKnown RBP11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 YIPF2Q9BWQ6 316 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 IMPG2Q9BZV3 1241 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 VPS11Q9H270 941 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 VCXQ9H320 206 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 MMADHCQ9H3L0 296 aaPredicted RBP11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 C17orf75Q9HAS0 396 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 TAS2R1Q9NYW7 299 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 XPO7Q9UIA9 1087 aaKnown RBP11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 ZSCAN9O15535 394 aaPredicted RBP11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 TMEM63AO94886 807 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 CALB1P05937 261 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 PSMA2P25787 234 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 FAAP100Q0VG06 881 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 SCARA5Q6ZMJ2 495 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 UNC45BQ8IWX7 931 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 FAM71DQ8N9W8 422 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 DCAKDQ8WVC6 231 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 PTCD3Q96EY7 689 aaKnown RBP11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 FAM161BQ96MY7 647 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 HAPLN2Q9GZV7 340 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 DEFB129Q9H1M3 183 aa11.01□□□□□ -0.65
CX3CL1-201ENST00000006053 PXMP2Q9NR77 195 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms