RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 TAS2R1Q9NYW7 299 aa14.71□□□□□ -0.06
USH1C-201ENST00000005226 WASF2Q9Y6W5 498 aa14.71□□□□□ -0.06
USH1C-201ENST00000005226 CNTNAP2Q9UHC6 1331 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 CAPN9O14815 690 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 CCDC22O60826 627 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 TBX10O75333 385 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 MCL1Q07820 350 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 MTMR2Q13614 643 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 KBTBD12Q3ZCT8 623 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 RAB6CQ53S08 254 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 CDHR3Q6ZTQ4 885 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 PRPF39Q86UA1 669 aaKnown RBP14.7□□□□□ -0.06
USH1C-201ENST00000005226 ZC3H18Q86VM9 953 aaKnown RBP14.7□□□□□ -0.06
USH1C-201ENST00000005226 DEPTORQ8TB45 409 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 SCG3Q8WXD2 468 aaKnown RBP14.7□□□□□ -0.06
USH1C-201ENST00000005226 RAB6CQ9H0N0 254 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 C17orf75Q9HAS0 396 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 SAR1AQ9NR31 198 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 CISHQ9NSE2 258 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 LNPEPQ9UIQ6 1025 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.7□□□□□ -0.06
USH1C-201ENST00000005226 LIN7AO14910 233 aaPredicted RBP14.7□□□□□ -0.06
USH1C-201ENST00000005226 MAP3K6O95382 1288 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 PSAPP07602 524 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 MYL2P10916 166 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 PHBP35232 272 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 SP2Q02086 613 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 TEX9Q8N6V9 391 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 FBXO41Q8TF61 875 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 HSPH1Q92598 858 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 MCUR1Q96AQ8 359 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 CGRRF1Q99675 332 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 RPAP3Q9H6T3 665 aaPredicted RBP14.7□□□□□ -0.06
USH1C-201ENST00000005226 JPH1Q9HDC5 661 aaPredicted RBP14.7□□□□□ -0.06
USH1C-201ENST00000005226 CYTH4Q9UIA0 394 aa14.7□□□□□ -0.06
USH1C-201ENST00000005226 LTBP4Q8N2S1 1624 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 CCDC195A0A1B0GUA6 201 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 PIK3R2O00459 728 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 KITP10721 976 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 ESRRAP11474 423 aaPredicted RBP14.69□□□□□ -0.06
USH1C-201ENST00000005226 AMPD1P23109 780 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 RAP1GAPP47736 663 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 YWHAGP61981 247 aaKnown RBP eCLIP14.69□□□□□ -0.06
USH1C-201ENST00000005226 IRX1P78414 480 aaPredicted RBP14.69□□□□□ -0.06
USH1C-201ENST00000005226 MMRN1Q13201 1228 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 PTK7Q13308 1070 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 RCN2Q14257 317 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 TSNAXIP1Q2TAA8 658 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 RFX6Q8HWS3 928 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 CLPTM1LQ96KA5 538 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 TCHPQ9BT92 498 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 DHRS4Q9BTZ2 278 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 PPP1R12CQ9BZL4 782 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 NMUR2Q9GZQ4 415 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 FZD1Q9UP38 647 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 E7ENQ6 273 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 WDR46O15213 610 aaKnown RBP14.69□□□□□ -0.06
USH1C-201ENST00000005226 ONECUT3O60422 494 aaPredicted RBP14.69□□□□□ -0.06
USH1C-201ENST00000005226 SMIM24O75264 130 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 LRCH4O75427 683 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 CALB1P05937 261 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 CD19P15391 556 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 ZNF132P52740 706 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 OSTNP61366 133 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 KLC1Q07866 573 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 THOC5Q13769 683 aaKnown RBP14.69□□□□□ -0.06
USH1C-201ENST00000005226 PPP1R15BQ5SWA1 713 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 FAXCQ5TGI0 409 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 CDR2LQ86X02 465 aaPredicted RBP14.69□□□□□ -0.06
USH1C-201ENST00000005226 TMEM35BQ8NCS4 154 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 TRIM56Q9BRZ2 755 aaKnown RBP14.69□□□□□ -0.06
USH1C-201ENST00000005226 SLC9A2Q9UBY0 812 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 MARCOQ9UEW3 520 aaPredicted RBP14.69□□□□□ -0.06
USH1C-201ENST00000005226 CNTN6Q9UQ52 1028 aa14.69□□□□□ -0.06
USH1C-201ENST00000005226 A0A0B4J269 797 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 SIGLEC16A6NMB1 481 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 KBTBD13C9JR72 458 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 FCHO1O14526 889 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 DLDP09622 509 aaKnown RBP14.68□□□□□ -0.06
USH1C-201ENST00000005226 CCND2P30279 289 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 SATB1Q01826 763 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 FSTL1Q12841 308 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 PTPN20Q4JDL3 420 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 LRRC38Q5VT99 294 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 CFAP36Q96G28 342 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 CALN1Q9BXU9 219 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 VPS11Q9H270 941 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 STOML1Q9UBI4 398 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 NXF1Q9UBU9 619 aaKnown RBP14.68□□□□□ -0.06
USH1C-201ENST00000005226 TCRBV9S1A1TA0A576 114 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 CYB561D2O14569 222 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 PSMG1O95456 288 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 KDELR1P24390 212 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 TBXAS1P24557 533 aaPredicted RBP14.68□□□□□ -0.06
USH1C-201ENST00000005226 VHLP40337 213 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 EIF3EP60228 445 aaKnown RBP14.68□□□□□ -0.06
USH1C-201ENST00000005226 CDK16Q00536 496 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 PIGHQ14442 188 aaPredicted RBP14.68□□□□□ -0.06
USH1C-201ENST00000005226 SH3PXD2AQ5TCZ1 1133 aa14.68□□□□□ -0.06
USH1C-201ENST00000005226 CES4AQ5XG92 561 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms