RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Samd11Q1RNF8 542 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Tdrd5Q5VCS6 1040 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Zbtb8bQ8CII0 484 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Cbx8Q9QXV1 362 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Kcnh4A2A5F7 1018 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 NfibP97863 570 aaKnown RBP12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Zfp607aQ3TQG9 686 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Xlr3cQ61806 226 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Zfp398Q8BV16 643 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Snapc1Q8K0S9 389 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Eif3lQ8QZY1 564 aaKnown RBP12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Pcdha10Q91Y20 946 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Traf7Q922B6 594 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Mta3Q924K8 591 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Tktl2Q9D4D4 627 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Iqgap3F8VQ29 1632 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Dnmt1P13864 1620 aaKnown RBP12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Tmem45a2B7ZWJ5 289 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Casp12O08736 419 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Coq7P97478 217 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 GmncQ3URY2 333 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 RadilQ69Z89 1099 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Brd8Q8R3B7 951 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Fbxo32Q9CPU7 355 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Anxa8O35640 327 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 RaraP11416 462 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Chi3l1Q61362 389 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Chmp2bQ8BJF9 213 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Mtrf1Q8K126 446 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 TbccQ8VCN9 341 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Q922M7 232 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Med24Q99K74 987 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Tmem192Q9CXT7 266 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Timm50Q9D880 353 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Erich1E9PY43 332 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Atp13a5Q3TYU2 1216 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Tcf12Q61286 706 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Cyp2c29Q64458 490 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Cyp4x1Q6A152 507 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Ints2Q80UK8 1198 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Pak5Q8C015 719 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Dedd2Q8QZV0 330 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Olfr1467Q8VFW1 308 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Tcirg1Q9JHF5 834 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 PodxlQ9R0M4 503 aa12.99□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Robo2Q7TPD3 1470 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Kctd14A0A0U1RNG7 287 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Serpina16D3Z660 418 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Atf6F6VAN0 656 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 ClockO08785 855 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Pkn1P70268 946 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Tmtc3Q8BRH0 920 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Chd5A2A8L1 1946 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Mucl2P02815 138 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 S100a15aQ6S5I3 108 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Far2Q7TNT2 515 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Trim9Q8C7M3 817 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Epc1Q8C9X6 813 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Il31raQ8K5B1 716 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Smyd2Q8R5A0 433 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 CbsQ91WT9 561 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Mrto4Q9D0I8 239 aaKnown RBP12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Poc5Q9DBS8 558 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Ifi213D3Z5G0 586 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 HunkO88866 714 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Fkbp1aP26883 108 aaKnown RBP12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Usp39Q3TIX9 564 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 SnrpaQ62189 287 aaKnown RBP12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Ifit3Q64345 403 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Tas2r115Q7M719 310 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Rnf139Q7TMV1 668 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Pan2Q8BGF7 1200 aaKnown RBP12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Ccdc59Q8R2N0 240 aaKnown RBP12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Sh3glb2Q8R3V5 400 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Zkscan3Q91VW9 553 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Prrg1A2BFE8 218 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Vsnl1P62761 191 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Eps8Q08509 821 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Prpf18Q8BM39 342 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 4932414N04RikQ8CEQ9 752 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 PdxkQ8K183 312 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Tdrd3Q91W18 743 aaKnown RBP12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Atp6v1c1Q9Z1G3 382 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Slfn3A0A1L1STQ7 640 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Sdc4O35988 198 aaKnown RBP12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Rhox12Q4TU81 186 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Klra8Q60682 266 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Tspyl5Q69ZB3 406 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Ddx55Q6ZPL9 600 aaKnown RBP12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Tmem169Q8BG50 297 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Trpm8Q8R4D5 1104 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 RnmtQ9D0L8 465 aaKnown RBP12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Psmd14O35593 310 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Cdkl4Q3TZA2 342 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Arhgef38Q80VK6 770 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Akr1c20Q8VC77 323 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Mospd1Q8VEL0 213 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Efcab12V9GXH0 673 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 Hecw2Q6I6G8 1578 aa12.98□□□□□ -0.33
Col6a3-208ENSMUST00000188587 FanceB8JJD6 213 aa12.98□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms