RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 C130060K24RikG3UWA8 416 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Gm3424L7N298 263 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Gm8246M0QWX9 263 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Xbp1O35426 267 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Ifnar2O35664 513 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Mmp10O55123 476 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Magea8O89012 320 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Il3P01586 166 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Gnat1P20612 350 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Eif3eP60229 445 aaKnown RBP12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 S100a5P63084 93 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Tdrd5Q5VCS6 1040 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 GlmnQ8BZM1 596 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Znf426Q8R1D1 550 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Kdm4bQ91VY5 1086 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Lpin3Q99PI4 848 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Slc25a11Q9CR62 314 aaKnown RBP12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Smyd3Q9CWR2 428 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Nt5c3aQ9D020 331 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Ddx56Q9D0R4 546 aaKnown RBP12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Sgf29Q9DA08 293 aaKnown RBP12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Rbp7Q9EPC5 134 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Rdh14Q9ERI6 334 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Rilpl1Q9JJC6 406 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Tmod2Q9JKK7 351 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Nupr1Q9WTK0 80 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Zfp94E9Q6Y4 486 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Gm379J3QQ19 296 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Phka1P18826 1241 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Casp7P97864 303 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Ampd1Q3V1D3 745 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Ubn1Q4G0F8 1135 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Rap1gap2Q5SVL6 712 aaKnown RBP12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Acap2Q6ZQK5 770 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Olfr1505Q7TQQ2 316 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Psmg1Q9JK23 289 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Trpc3Q9QZC1 836 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Arih1Q9Z1K5 555 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Speer3W4VSP1 261 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Myo5aQ99104 1853 aaKnown RBP12.08□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Clca3bE9PUL3 1044 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Gimd1E9PW74 217 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Vmn2r104E9Q2J5 860 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Drg1P32233 367 aaKnown RBP12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Psmc1P62192 440 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Cdh8P97291 799 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Ppp4r3cQ3V0Y1 813 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Wdtc1Q80ZK9 677 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Tor1aip2Q8BYU6 502 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Hdac7Q8C2B3 938 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Wdr27Q8C5V5 780 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 C8aQ8K182 587 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Tgif2lx2Q8K5B9 231 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Olfr390Q8VEZ7 311 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Epn3Q91W69 636 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Cpt1bQ924X2 772 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Sytl1Q99N80 567 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Txndc12Q9CQU0 170 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Frmpd3A0A140LIW3 1774 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Ms4a14A0A087WSD2 1232 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Cdr1E9Q0B4 517 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Nos2P29477 1144 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Glt6d1Q2NKH9 311 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Ptk6Q64434 451 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Kcnk18Q6VV64 394 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Gigyf2Q6Y7W8 1291 aaKnown RBP12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Znf579Q80VM4 562 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Kcns3Q8BQZ8 491 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Nipal4Q8BZF2 406 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Taf2Q8C176 1104 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Rfx6Q8C7R7 927 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Ccdc159Q8C963 411 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Mettl16Q9CQG2 553 aaKnown RBP12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Isl2Q9CXV0 359 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Serpinb3bQ9D1Q5 387 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Mageb3Q9D2H4 330 aa12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Sun1Q9D666 913 aaKnown RBP12.08□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Krt13P08730 437 aa12.07□□□□□ -0.48
Col9a1-202ENSMUST00000088349 InscQ3HNM7 579 aa12.07□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Arhgap45Q3TBD2 1116 aa12.07□□□□□ -0.48
Col9a1-202ENSMUST00000088349 OtulinQ3UCV8 352 aa12.07□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Abi3bpQ59IW6 1179 aa12.07□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Cage1Q5IR70 849 aa12.07□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Mea1Q64327 174 aa12.07□□□□□ -0.48
Col9a1-202ENSMUST00000088349 GnasQ6R0H7 1133 aa12.07□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Zfp454Q80Y34 536 aa12.07□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Mapk15Q80Y86 549 aa12.07□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Adamts2Q8C9W3 1213 aa12.07□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Stx18Q8VDS8 334 aa12.07□□□□□ -0.48
Col9a1-202ENSMUST00000088349 YarsQ91WQ3 528 aaKnown RBP12.07□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Akr1c14Q91WT7 323 aa12.07□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Rnf112Q96DY5 654 aa12.07□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Ppil2Q9D787 521 aa12.07□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Slc12a4Q9JIS8 1085 aa12.07□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Mtmr7Q9Z2C9 660 aa12.07□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Slc8a3S4R2P9 928 aa12.07□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Skint3A7TZF0 458 aa12.07□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Gm3415J3QMS8 315 aa12.07□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Cops5O35864 334 aa12.07□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Per1O35973 1291 aa12.07□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms