RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Lcp1Q61233 627 aaKnown RBP9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Tmc4Q7TQ65 694 aa9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 1700001J03RikQ80ZR8 219 aa9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Tbc1d10cQ8C9V1 444 aa9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Txndc12Q9CQU0 170 aa9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Stau1Q9Z108 487 aaKnown RBP9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Dnmt1P13864 1620 aaKnown RBP9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Gm21964A0A1W2P7S4 437 aa9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Olfr67F8VPJ8 320 aa9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 PtenO08586 403 aa9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 PigrO70570 771 aa9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Klra1P20937 262 aa9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Hspa9P38647 679 aaKnown RBP9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Rbp3P49194 1234 aa9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 ThraP63058 492 aa9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Rit2P70425 217 aa9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Stx5Q8K1E0 355 aa9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Snx9Q91VH2 595 aa9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Glra3Q91XP5 464 aa9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Traf7Q922B6 594 aa9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Kiaa0232Q80U59 1396 aaKnown RBP9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Slc16a1P53986 493 aa9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Otub1Q7TQI3 271 aa9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Smndc1Q8BGT7 238 aaKnown RBP9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Ticam2Q8BJQ4 232 aa9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Arhgef19Q8BWA8 802 aa9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 NcaphQ8C156 731 aa9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 TbcelQ8C5W3 424 aa9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Sumf1Q8R0F3 372 aa9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Cadm1Q8R5M8 456 aaKnown RBP9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Trpc5Q9QX29 975 aa9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Mdc1Q5PSV9 1707 aa9.72□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Zfyve9A2A8R0 1397 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Cdr2lA2A6T1 465 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Mroh4G3X8W1 983 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Magea1O89006 320 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Magea5O89009 320 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Ccna2P51943 422 aaKnown RBP9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 TdgP56581 421 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 McuQ3UMR5 350 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Tnfaip2Q61333 691 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Ugt1a9Q62452 528 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Egfl8Q6GUQ1 293 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Nipsnap3bQ9CQE1 247 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Polr3hQ9D2C6 204 aaKnown RBP9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Sh2d4aQ9D7V1 421 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Magea2Q9R2A2 320 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 F830016B08RikG3UWE2 416 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Stmn3O70166 180 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Cyp2c37P56654 490 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Rbm12b1Q80YR9 836 aaKnown RBP9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 UstQ8BUB6 407 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Nox1Q8CIZ9 591 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Echdc3Q9D7J9 300 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Nudt5Q9JKX6 218 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Dlc1Q9R0Z9 1092 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Ap4b1Q9WV76 738 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Ripk2P58801 539 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Mcm9Q2KHI9 1134 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Klhdc10Q6PAR0 439 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Dlgap3Q6PFD5 977 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Ago4Q8CJF8 861 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 LactbQ9EP89 551 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Atp6v1g2Q9WTT4 118 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Trim10Q9WUH5 489 aa9.71□□□□□ -0.85
Prpf40a-201ENSMUST00000076313 Gm8237E9Q257 205 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Anxa5P48036 319 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 SpoplQ2M2N2 392 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Ankrd42Q3V096 527 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Utp14bQ6EJB6 756 aaKnown RBP9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Atg4cQ811C2 458 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Ppm1nQ8BGL1 404 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Drd5Q8BLD9 478 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Ccdc63Q8CDV6 558 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Sept12Q9D451 317 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Trpm1Q2TV84 1622 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Adamts13Q769J6 1426 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Zfyve16Q80U44 1528 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Trim12cD3Z3L3 497 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Ifit3bE9PV48 403 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Ccng1P51945 294 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 RelaQ04207 549 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 4930430A15RikQ05AC5 485 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 YdjcQ14BV6 310 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Afg1lQ3V384 480 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Tbx2Q60707 711 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Chtf18Q8BIW9 969 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Ston1Q8CDJ8 730 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Ccdc81Q9D5W4 654 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Hecw2Q6I6G8 1578 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Ahdc1Q6PAL7 1594 aaKnown RBP9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Wdr72D3YYM4 1114 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Oog1E9Q5G7 496 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Nptx2O70340 429 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Traf2P39429 501 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Ptpn5P54830 541 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Mks1Q5SW45 561 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Gpatch2lQ6PE65 482 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Foxo6Q70KY4 559 aa9.71□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 NrcamQ810U4 1256 aa9.71□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms