RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Cyp2f2P33267 491 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Fam83hQ148V8 1209 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Mcm9Q2KHI9 1134 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Xpo1Q6P5F9 1071 aaKnown RBP12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Hdac11Q91WA3 347 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Nt5c3aQ9D020 331 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Tmem86aQ9D8N3 241 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Col5a2Q3U962 1497 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Il2rbP16297 539 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Slc8a1P70414 970 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Irf3P70671 419 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ppp1r13lQ5I1X5 824 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Grm6Q5NCH9 871 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Them6Q80ZW2 207 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ca9Q8VHB5 437 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 PotegA5H0M4 473 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Zfp788E9Q980 884 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Q3TQQ9 903 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Rnf208Q8K0W3 265 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Rilpl2Q99LE1 197 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Gm28043E0CXC2 719 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ddx55Q6ZPL9 600 aaKnown RBP12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 SybuQ8BHS8 665 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Pak5Q8C015 719 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 P3h4Q8K2B0 443 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Slc51aQ8R000 340 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Oas1dQ8VI95 361 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Pcdhb11Q91UZ8 797 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Serpina3nQ91WP6 418 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Dnaaf1Q9D2H9 634 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Dlgap1Q9D415 992 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Mgea5Q9EQQ9 916 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Aldh1a3Q9JHW9 512 aa12.38□□□□□ -0.43
Pcif1-201ENSMUST00000041643 4930444G20RikD3Z741 495 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 YwhahP68510 246 aaKnown RBP12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Kcnq1P97414 668 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ccdc160Q3UYG1 323 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Klhl14Q69ZK5 630 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Utp14bQ6EJB6 756 aaKnown RBP12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Mib1Q80SY4 1006 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Naa25Q8BWZ3 972 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Iqsec1Q8R0S2 961 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ankfn1A0A140LIW7 1083 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 2010300C02RikE9Q3M9 1175 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 PtprcP06800 1291 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Serpina3kP07759 418 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Tac1P41539 130 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Tlx1P43345 332 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Scarf1Q5ND28 820 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ddx3xQ62167 662 aaKnown RBP12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Lilrb4Q64281 335 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ino80dQ66JY2 873 aaKnown RBP12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Washc5Q8C2E7 1159 aaKnown RBP12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 HyiQ8R1F5 277 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Nudcd3Q8R1N4 363 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Sytl1Q99N80 567 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Slc4a9E9PUP3 929 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Prl6a1O35257 230 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Rrm1P07742 792 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Tulp2P46686 562 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Tespa1Q3U132 458 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Oca2Q62052 833 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Rad9bQ6WBX7 403 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Daam1Q8BPM0 1077 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Rtp1Q8C8C1 263 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Abcf2Q99LE6 628 aaKnown RBP12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 BlvraQ9CY64 295 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Atp6ap2Q9CYN9 350 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ccdc182Q9D9C6 152 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ddx39bQ9Z1N5 428 aaKnown RBP12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 March10E9PX79 788 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Dthd1E9PZX1 795 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 CrymO54983 313 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Tnfaip1O70479 316 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Cage1Q5IR70 849 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Sec23ipQ6NZC7 998 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Klhl29Q80T74 875 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Camta2Q80Y50 1208 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Gpt2Q8BGT5 522 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Tmem120aQ8C1E7 343 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Lsm7Q9CQQ8 103 aaKnown RBP12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Tlr6Q9EPW9 795 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Rabgef1Q9JM13 491 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Stat2Q9WVL2 923 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Zfp472B0V2W5 534 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ccdc153P0C7Q1 202 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Msh3P13705 1091 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 ProcP33587 460 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Nr2c2P49117 596 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Nudt18Q3U2V3 323 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ppp1r12cQ3UMT1 782 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Prkaa1Q5EG47 559 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Znf280dQ68FE8 974 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Q6GQU0 248 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Wscd1Q80XH4 572 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Vipas39Q8BGQ1 491 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Suds3Q8BR65 328 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Mettl13Q91YR5 698 aa12.37□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Lipo2D3YY49 398 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Zfy1P10925 782 aa12.36□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 34.3 ms