RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Creb3l2Q8BH52 521 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Uba3Q8C878 462 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Stau2Q8CJ67 570 aaKnown RBP11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Pofut2Q8VHI3 429 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Dach2Q925Q8 634 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 GsdmcQ99NB5 468 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 CygbQ9CX80 190 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Fip1l1Q9D824 581 aaKnown RBP11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Fem1bQ9Z2G0 627 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Pcdh9F8VPK8 1237 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 UgcgO88693 394 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 DcxO88809 366 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 VegfaQ00731 214 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Nt5dc3Q3UHB1 546 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Grik5Q61626 979 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Tbc1d22bQ80VE5 505 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Q8CD60 292 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Def8Q99J78 448 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 NonoQ99K48 473 aaKnown RBP11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Dpp3Q99KK7 738 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Trim54Q9ERP3 366 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Arl10Q9QXJ4 243 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 RecqlQ9Z129 648 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Atp8b4A2ANX3 1194 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Rabgap1A2AWA9 1064 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Zfp457L7N1X4 647 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Stra6O70491 670 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Plk1Q07832 603 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Slc9b2Q5BKR2 547 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Tmcc1Q69ZZ6 649 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Olfr1505Q7TQQ2 316 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Slc17a6Q8BLE7 582 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 SncaipQ99ME3 962 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Cul2Q9D4H8 745 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Hey2Q9QUS4 339 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ccdc88aQ5SNZ0 1873 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ms4a14A0A087WSD2 1232 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ankfn1A0A140LIW7 1083 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ssxb9A2BI93 185 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Siah3B2RWG3 268 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Cyp2a22B2RXZ2 492 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Rad51ap2G3UW63 976 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Spin2fJ3QPU0 254 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Alkbh5Q3TSG4 395 aaKnown RBP11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Lipo3Q3UT41 399 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Znf652Q5DU09 608 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Cyp2c29Q64458 490 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ino80dQ66JY2 873 aaKnown RBP11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Fastkd1Q6DI86 829 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Q6GQV0 436 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 RfflQ6ZQM0 377 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Slitrk1Q810C1 696 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Fbxo43Q8CDI2 640 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Olfr809Q8VEX8 328 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 PlvapQ91VC4 438 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Pcdhgb1Q91XX8 918 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Itgb1bp2Q9R000 350 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Mettl1Q9Z120 268 aa11.79□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Gm8444F6XS56 118 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Irf8P23611 424 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Cdh8P97291 799 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Lypla1P97823 230 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Tfdp1Q08639 410 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ubn1Q4G0F8 1135 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Srek1ip1Q4V9W2 153 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Trcg1Q58Y74 825 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Olfr792Q7TRH9 311 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 RimklbQ80WS1 387 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 B3glctQ8BHT6 489 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Stx18Q8VDS8 334 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Lrp8Q924X6 996 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ddx56Q9D0R4 546 aaKnown RBP11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Subh2bvQ9D9Z7 123 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Scyl3Q9DBQ7 735 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Tnnc2P20801 160 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Eno3P21550 434 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Calhm4Q8CE93 315 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Lin7aQ8JZS0 233 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Vmn1r64Q8R2B8 320 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 HnmtQ91VF2 295 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Cpt1bQ924X2 772 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Pgm3Q9CYR6 542 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Nme3Q9WV85 169 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 LipaQ9Z0M5 397 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Prss51A0A286YDY8 319 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Lrrc10bG3XA50 292 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ebf3O08791 596 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Smyd1P97443 490 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Myl6Q60605 151 aaKnown RBP11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Mysm1Q69Z66 819 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 2700097O09RikQ6PGK3 301 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Thnsl1Q8BH55 747 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Dhx36Q8VHK9 1001 aaKnown RBP11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 GatbQ99JT1 557 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Sun1Q9D666 913 aaKnown RBP11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Styxl1Q9DAR2 321 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Tm9sf1Q9DBU0 606 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ifi202Q9R002 445 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Lmtk3Q5XJV6 1424 aa11.78□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Gm16430A6X8J1 155 aa11.78□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms