RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Rbp3P49194 1234 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 PtpreP49446 699 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Ezh1P70351 747 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Snx25Q3ZT31 840 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 SrlQ7TQ48 910 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Ppfia2Q8BSS9 1257 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Q8BZE1 841 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Smtnl2Q8CI12 456 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Fbxo33Q8VE08 562 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Fam212aQ9CX62 282 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Pramef12Q9D2F1 463 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Akr1e2Q9DCT1 301 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Tnfrsf10bQ9QZM4 381 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Gpr161B2RPY5 545 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Tada2bD3Z4Z0 420 aaKnown RBP21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Wdr95D3Z7A8 784 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Gm3415J3QMS8 315 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Mxi1P50540 228 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Sesn2P58043 480 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Ugt1a2P70691 533 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Runx2Q08775 607 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Rnf10Q3UIW5 804 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Samhd1Q60710 627 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Ugt1a1Q63886 535 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Ppp2r2aQ6P1F6 447 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Suz12Q80U70 741 aaKnown RBP21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Tspan18Q80WR1 248 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Zfp64Q99KE8 643 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Zmat2Q9CPW7 199 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Isl2Q9CXV0 359 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Bbs5Q9CZQ9 341 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Gm3404Q9D506 307 aa21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Gtf2ird1Q9JI57 1104 aaKnown RBP21.14■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Tap2P36371 702 aa21.13■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Rrp36Q3UFY0 244 aaKnown RBP21.13■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 GapdhsQ64467 440 aa21.13■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Apol7cQ8C6E1 369 aa21.13■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Fbxo16Q9QZM9 334 aa21.13■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Anapc7Q9WVM3 565 aa21.13■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Apol11aE9PZG0 334 aa21.13■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Speer2E9Q9U2 264 aa21.13■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Gm10721J3QPJ9 223 aa21.13■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Oaz1P54369 227 aa21.13■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Q3UTZ3 580 aa21.13■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Luc7l3Q5SUF2 432 aaKnown RBP21.13■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Nacc1Q7TSZ8 514 aa21.13■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 GneQ91WG8 722 aaKnown RBP21.13■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Znhit2Q9QY66 399 aa21.13■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Gm3371F7CQW8 167 aa21.12■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 DffaO54786 331 aa21.12■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Nlrc4Q3UP24 1024 aa21.12■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Tars2Q3UQ84 723 aaKnown RBP21.12■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Ccdc110Q3V125 848 aa21.12■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Slain1Q68FF7 579 aa21.12■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 SowahaQ8BLS7 548 aa21.12■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Rassf9Q8K342 435 aa21.12■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Dpp3Q99KK7 738 aa21.12■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Anxa9Q9JHQ0 345 aa21.12■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Nr1h3Q9Z0Y9 445 aa21.12■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Olfr391-psA0A0U1RNJ4 312 aa21.12■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Ccdc170D3YXL0 722 aa21.12■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Hsd17b2P51658 381 aa21.12■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Psmc4P54775 418 aa21.12■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Nlrp4aQ8BU40 982 aa21.12■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Cd300ldQ8VCH2 221 aa21.12■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Cdk5rap3Q99LM2 503 aa21.12■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Snf8Q9CZ28 258 aa21.12■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Ccdc124Q9D8X2 217 aaKnown RBP21.12■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Mrpl4Q9DCU6 294 aaKnown RBP21.12■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Atp6v1g2Q9WTT4 118 aa21.12■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Trim5E9PV98 497 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Irs1P35569 1233 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Prdx5P99029 210 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Tdpoz4Q6YCH2 370 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Usp6nlQ80XC3 819 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Pum3Q8BKS9 647 aaKnown RBP21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Svs3bQ8BZH8 265 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 VcpkmtQ8C436 228 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Drc3Q9D5E4 523 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Msgn1Q9JK54 188 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Cntnap5aQ0V8T9 1304 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 1700031M16RikA0A087WSH0 82 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Gm44511A0A0N4SW10 223 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Ildr2B5TVM2 661 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 HunkO88866 714 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Klrb1bP27812 223 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Mmp3P28862 477 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Cxcr2P35343 359 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Wscd1Q80XH4 572 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Slc9a4Q8BUE1 797 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Rpa1Q8VEE4 623 aaKnown RBP21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Epn3Q91W69 636 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 SmtnQ921U8 923 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Tubgcp4Q9D4F8 667 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Atp6v1e2Q9D593 226 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Cdc42ep5Q9Z0X0 150 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Acp4D3YTS9 425 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Art2aP17981 287 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Tbxas1P36423 533 aa21.11■□□□□ 0.97
Ctdsp1-201ENSMUST00000027367 Stmn1P54227 149 aaKnown RBP21.11■□□□□ 0.97
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms