RNA–Protein interactions for RNA: YPR184W

GDB1, Transcript of Glycogen debranching enzyme, yeast

Gene GDB1, Length 4,611 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDB1	YPR184W	CTR2	P38865	189 aa		4.22	□□□□□ -1.73
GDB1	YPR184W	YDR366C	P87287	132 aa		4.22	□□□□□ -1.73
GDB1	YPR184W	YAR029W	P39549	74 aa		4.22	□□□□□ -1.73
GDB1	YPR184W	BUD25	P85052	153 aa		4.22	□□□□□ -1.73
GDB1	YPR184W	YDR114C	Q04597	100 aa		4.22	□□□□□ -1.73
GDB1	YPR184W	YPR117W	Q06116	2489 aa		4.21	□□□□□ -1.73
GDB1	YPR184W	YBL059W	P34224	193 aa		4.21	□□□□□ -1.74
GDB1	YPR184W	VPS55	P47111	140 aa		4.21	□□□□□ -1.74
GDB1	YPR184W	PEX17	P40155	199 aa		4.21	□□□□□ -1.74
GDB1	YPR184W	GON7	P46984	123 aa		4.21	□□□□□ -1.74
GDB1	YPR184W	EST3	Q03096	181 aa		4.21	□□□□□ -1.74
GDB1	YPR184W	YLR363W-A	Q3E747	85 aa		4.21	□□□□□ -1.74
GDB1	YPR184W	YLR342W-A	Q3E810	57 aa		4.21	□□□□□ -1.74
GDB1	YPR184W	CUP2	P15315	225 aa		4.21	□□□□□ -1.74
GDB1	YPR184W	GPI19	Q04082	140 aa		4.21	□□□□□ -1.74
GDB1	YPR184W	IRA1	P18963	3092 aa		4.21	□□□□□ -1.74
GDB1	YPR184W	PRE5	P40302	234 aa	Known RBP	4.2	□□□□□ -1.74
GDB1	YPR184W	POR1	P04840	283 aa	Known RBP	4.2	□□□□□ -1.74
GDB1	YPR184W	YIR020C	P40575	100 aa		4.2	□□□□□ -1.74
GDB1	YPR184W	YCH1	P42937	148 aa		4.2	□□□□□ -1.74
GDB1	YPR184W	YMR166C	Q03829	368 aa		4.2	□□□□□ -1.74
GDB1	YPR184W	AVO2	Q04749	426 aa		4.2	□□□□□ -1.74
GDB1	YPR184W	RPL43A	P0CX25	92 aa	Known RBP	4.2	□□□□□ -1.74
GDB1	YPR184W	RPL43B	P0CX26	92 aa		4.2	□□□□□ -1.74
GDB1	YPR184W	ERS1	P17261	260 aa		4.2	□□□□□ -1.74
GDB1	YPR184W	SNA2	P56508	79 aa		4.2	□□□□□ -1.74
GDB1	YPR184W	ISU2	Q12056	156 aa		4.2	□□□□□ -1.74
GDB1	YPR184W	YIL046W-A	Q3E7Z4	54 aa		4.2	□□□□□ -1.74
GDB1	YPR184W	PRY1	P47032	299 aa		4.2	□□□□□ -1.74
GDB1	YPR184W	YPL261C	Q08976	102 aa		4.2	□□□□□ -1.74
GDB1	YPR184W	BOL1	Q3E793	110 aa		4.2	□□□□□ -1.74
GDB1	YPR184W	YLR358C	O13565	187 aa		4.19	□□□□□ -1.74
GDB1	YPR184W	HAC1	P41546	238 aa		4.19	□□□□□ -1.74
GDB1	YPR184W	YJR096W	P47137	282 aa		4.19	□□□□□ -1.74
GDB1	YPR184W	GAT3	Q07928	141 aa		4.19	□□□□□ -1.74
GDB1	YPR184W	VMA9	Q3E7B6	73 aa		4.19	□□□□□ -1.74
GDB1	YPR184W	YHR139C-A	O13536	103 aa		4.19	□□□□□ -1.74
GDB1	YPR184W	YJL028W	P47062	111 aa		4.19	□□□□□ -1.74
GDB1	YPR184W	EOS1	P53938	366 aa		4.19	□□□□□ -1.74
GDB1	YPR184W	YMR082C	Q04276	118 aa		4.19	□□□□□ -1.74
GDB1	YPR184W	PEX4	P29340	183 aa		4.19	□□□□□ -1.74
GDB1	YPR184W	MPC2	P38857	129 aa		4.19	□□□□□ -1.74
GDB1	YPR184W	ALG14	P38242	237 aa		4.18	□□□□□ -1.74
GDB1	YPR184W	SNU13	P39990	126 aa	Known RBP	4.18	□□□□□ -1.74
GDB1	YPR184W	YPL073C	P40323	161 aa		4.18	□□□□□ -1.74
GDB1	YPR184W	SPS18	P32572	300 aa		4.18	□□□□□ -1.74
GDB1	YPR184W	FLO10	P36170	1169 aa		4.18	□□□□□ -1.74
GDB1	YPR184W	ATX1	P38636	73 aa		4.18	□□□□□ -1.74
GDB1	YPR184W	YER076C	P40049	302 aa		4.18	□□□□□ -1.74
GDB1	YPR184W	DPP1	Q05521	289 aa		4.18	□□□□□ -1.74
GDB1	YPR184W	MTR2	P34232	184 aa	Known RBP	4.18	□□□□□ -1.74
GDB1	YPR184W	YER134C	P40081	178 aa		4.18	□□□□□ -1.74
GDB1	YPR184W	YNL195C	P40168	261 aa		4.18	□□□□□ -1.74
GDB1	YPR184W	SUT1	P53032	299 aa	Known RBP	4.18	□□□□□ -1.74
GDB1	YPR184W	ADH1	P00330	348 aa	Known RBP	4.18	□□□□□ -1.74
GDB1	YPR184W	RPL23A	P0CX41	137 aa	Known RBP	4.18	□□□□□ -1.74
GDB1	YPR184W	RPL23B	P0CX42	137 aa	Known RBP	4.18	□□□□□ -1.74
GDB1	YPR184W	PCL2	P25693	308 aa		4.18	□□□□□ -1.74
GDB1	YPR184W	YOX1	P34161	385 aa		4.18	□□□□□ -1.74
GDB1	YPR184W	YIL163C	P40448	117 aa		4.18	□□□□□ -1.74
GDB1	YPR184W	CUE4	Q04201	117 aa	Predicted RBP	4.18	□□□□□ -1.74
GDB1	YPR184W	YKL070W	P36087	169 aa		4.17	□□□□□ -1.74
GDB1	YPR184W	ADH5	P38113	351 aa	Known RBP	4.17	□□□□□ -1.74
GDB1	YPR184W	PAU23	Q07987	124 aa		4.17	□□□□□ -1.74
GDB1	YPR184W	YOR192C-C	Q3E736	78 aa		4.17	□□□□□ -1.74
GDB1	YPR184W	RPL18A	P0CX49	186 aa	Known RBP	4.17	□□□□□ -1.74
GDB1	YPR184W	RPL18B	P0CX50	186 aa	Known RBP	4.17	□□□□□ -1.74
GDB1	YPR184W	MRP49	P32388	137 aa		4.17	□□□□□ -1.74
GDB1	YPR184W	CRC1	Q12289	327 aa		4.17	□□□□□ -1.74
GDB1	YPR184W	COX19	Q3E731	98 aa		4.17	□□□□□ -1.74
GDB1	YPR184W	YMR316C-A	I2HB70	103 aa		4.17	□□□□□ -1.74
GDB1	YPR184W	PCL1	P24867	279 aa		4.17	□□□□□ -1.74
GDB1	YPR184W	FIP1	P45976	327 aa		4.17	□□□□□ -1.74
GDB1	YPR184W	AIM11	P87275	137 aa		4.17	□□□□□ -1.74
GDB1	YPR184W	NRG1	Q03125	231 aa		4.17	□□□□□ -1.74
GDB1	YPR184W	YPL119C-A	Q3E751	87 aa		4.17	□□□□□ -1.74
GDB1	YPR184W	YKL018C-A	Q3E7A7	99 aa		4.17	□□□□□ -1.74
GDB1	YPR184W	YAR023C	D6VPM8	179 aa		4.17	□□□□□ -1.74
GDB1	YPR184W	RPL16B	P26785	198 aa	Known RBP	4.17	□□□□□ -1.74
GDB1	YPR184W	PTH1	P38876	190 aa	Known RBP	4.17	□□□□□ -1.74
GDB1	YPR184W	YGR050C	P53231	118 aa		4.17	□□□□□ -1.74
GDB1	YPR184W	YOP1	Q12402	180 aa		4.17	□□□□□ -1.74
GDB1	YPR184W	SDH4	P37298	181 aa		4.16	□□□□□ -1.74
GDB1	YPR184W	HAL1	Q01766	294 aa		4.16	□□□□□ -1.74
GDB1	YPR184W	VPS71	Q03433	280 aa		4.16	□□□□□ -1.74
GDB1	YPR184W	SOD1	P00445	154 aa	Known RBP	4.16	□□□□□ -1.74
GDB1	YPR184W	KTI12	P34253	313 aa	Known RBP	4.16	□□□□□ -1.74
GDB1	YPR184W	SDH8	P38345	138 aa		4.16	□□□□□ -1.74
GDB1	YPR184W	POC4	Q12245	148 aa	Predicted RBP	4.16	□□□□□ -1.74
GDB1	YPR184W	YIL060W	P40519	144 aa		4.16	□□□□□ -1.74
GDB1	YPR184W	FIT2	Q08906	153 aa		4.16	□□□□□ -1.74
GDB1	YPR184W	TOR2	P32600	2474 aa	Known RBP	4.16	□□□□□ -1.74
GDB1	YPR184W	DDI2	P0CH63	225 aa		4.15	□□□□□ -1.74
GDB1	YPR184W	DDI3	P0CH64	225 aa		4.15	□□□□□ -1.74
GDB1	YPR184W	PRY2	P36110	329 aa		4.15	□□□□□ -1.74
GDB1	YPR184W	YKR070W	P36151	352 aa	Known RBP	4.15	□□□□□ -1.74
GDB1	YPR184W	VTC1	P40046	129 aa	RIP-Chip data	4.15	□□□□□ -1.74	not detected
GDB1	YPR184W	SIM1	P40472	476 aa		4.15	□□□□□ -1.74
GDB1	YPR184W	HST4	P53688	370 aa		4.15	□□□□□ -1.74
GDB1	YPR184W	YER085C	P40058	173 aa		4.15	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 517.7 ms