RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W YBL112CQ3E7Y4 105 aa2.6□□□□□ -1.99
VPS17YOR132W YHR214C-DP0CX93 97 aa2.6□□□□□ -1.99
VPS17YOR132W SSS1P35179 80 aa2.6□□□□□ -1.99
VPS17YOR132W MSA2P36157 363 aa2.6□□□□□ -1.99
VPS17YOR132W YGP1P38616 354 aaKnown RBP2.6□□□□□ -1.99
VPS17YOR132W FLX1P40464 311 aa2.6□□□□□ -1.99
VPS17YOR132W PHS1P40857 217 aa2.6□□□□□ -1.99
VPS17YOR132W PHB1P40961 287 aa2.6□□□□□ -1.99
VPS17YOR132W RPA43P46669 326 aa2.6□□□□□ -1.99
VPS17YOR132W YJR015WP47090 510 aa2.6□□□□□ -1.99
VPS17YOR132W LPP1Q04396 274 aa2.6□□□□□ -1.99
VPS17YOR132W YMR320WQ04897 101 aa2.6□□□□□ -1.99
VPS17YOR132W MPD1Q12404 318 aaKnown RBP2.6□□□□□ -1.99
VPS17YOR132W YDL012CQ12489 107 aa2.6□□□□□ -1.99
VPS17YOR132W YFR032C-BQ8TGU2 87 aa2.6□□□□□ -1.99
VPS17YOR132W HTL1Q9URQ5 78 aa2.6□□□□□ -1.99
VPS17YOR132W FMP27Q06179 2628 aa2.6□□□□□ -1.99
VPS17YOR132W SEC59P20048 519 aa2.59□□□□□ -2
VPS17YOR132W MRPS9P38120 278 aa2.59□□□□□ -2
VPS17YOR132W CSH1P38287 376 aa2.59□□□□□ -2
VPS17YOR132W YBR292CP38357 123 aa2.59□□□□□ -2
VPS17YOR132W SEC16P48415 2195 aaKnown RBP2.59□□□□□ -2
VPS17YOR132W DIG2Q03373 323 aaKnown RBP2.59□□□□□ -2
VPS17YOR132W RAV2Q03956 351 aa2.59□□□□□ -2
VPS17YOR132W YMR090WQ04304 227 aaKnown RBP2.59□□□□□ -2
VPS17YOR132W MIX14Q04341 121 aa2.59□□□□□ -2
VPS17YOR132W GRH1Q04410 372 aaKnown RBP2.59□□□□□ -2
VPS17YOR132W ECM19Q06011 112 aa2.59□□□□□ -2
VPS17YOR132W YOL029CQ08187 201 aa2.59□□□□□ -2
VPS17YOR132W YPL162CQ12042 273 aa2.59□□□□□ -2
VPS17YOR132W DFM1Q12743 341 aaKnown RBP2.59□□□□□ -2
VPS17YOR132W WIP1Q2V2P8 89 aa2.59□□□□□ -2
VPS17YOR132W ACC1Q00955 2233 aaKnown RBP2.59□□□□□ -2
VPS17YOR132W SPO13P23624 291 aa2.58□□□□□ -2
VPS17YOR132W SUA7P29055 345 aaPredicted RBP2.58□□□□□ -2
VPS17YOR132W TRS20P38334 175 aa2.58□□□□□ -2
VPS17YOR132W YPT31P38555 223 aaKnown RBP2.58□□□□□ -2
VPS17YOR132W RPF1P38805 295 aaKnown RBP2.58□□□□□ -2
VPS17YOR132W CCS1P40202 249 aaKnown RBP2.58□□□□□ -2
VPS17YOR132W BLM10P43583 2143 aa2.58□□□□□ -2
VPS17YOR132W IGD1P43598 195 aa2.58□□□□□ -2
VPS17YOR132W YGL118CP53132 145 aa2.58□□□□□ -2
VPS17YOR132W PAU4P53427 120 aa2.58□□□□□ -2
VPS17YOR132W CYT2Q00873 224 aa2.58□□□□□ -2
VPS17YOR132W UBC7Q02159 165 aa2.58□□□□□ -2
VPS17YOR132W AVO2Q04749 426 aa2.58□□□□□ -2
VPS17YOR132W YPL264CQ08980 353 aa2.58□□□□□ -2
VPS17YOR132W PAU1P0CE88 120 aa2.57□□□□□ -2
VPS17YOR132W PAU14P0CE89 120 aa2.57□□□□□ -2
VPS17YOR132W PAU6P0CE90 120 aa2.57□□□□□ -2
VPS17YOR132W PAU18P0CE91 120 aa2.57□□□□□ -2
VPS17YOR132W PAU8P0CE92 120 aa2.57□□□□□ -2
VPS17YOR132W PAU11P0CE93 120 aa2.57□□□□□ -2
VPS17YOR132W PBI2P0CT04 75 aaKnown RBP2.57□□□□□ -2
VPS17YOR132W RPB9P27999 122 aa2.57□□□□□ -2
VPS17YOR132W SCM4P32564 187 aa2.57□□□□□ -2
VPS17YOR132W GPI18P38211 433 aa2.57□□□□□ -2
VPS17YOR132W PAU13P38725 120 aa2.57□□□□□ -2
VPS17YOR132W YGR269WP40326 108 aa2.57□□□□□ -2
VPS17YOR132W SMD3P43321 101 aaKnown RBP2.57□□□□□ -2
VPS17YOR132W ERG25P53045 309 aa2.57□□□□□ -2
VPS17YOR132W ERV14P53173 138 aa2.57□□□□□ -2
VPS17YOR132W PAU10Q03050 120 aa2.57□□□□□ -2
VPS17YOR132W PAU20Q08322 120 aa2.57□□□□□ -2
VPS17YOR132W PAU9Q3E770 120 aa2.57□□□□□ -2
VPS17YOR132W CDC39P25655 2108 aaKnown RBP2.57□□□□□ -2
VPS17YOR132W IRA2P19158 3079 aa2.57□□□□□ -2
VPS17YOR132W HFA1P32874 2273 aa2.57□□□□□ -2
VPS17YOR132W YPR170W-BP0C5R9 85 aa2.57□□□□□ -2
VPS17YOR132W PAU19P0CE85 124 aa2.57□□□□□ -2
VPS17YOR132W PAU21P0CE86 164 aa2.57□□□□□ -2
VPS17YOR132W PAU22P0CE87 164 aa2.57□□□□□ -2
VPS17YOR132W PAU3P25610 124 aa2.57□□□□□ -2
VPS17YOR132W SHB17P36136 271 aaKnown RBP2.57□□□□□ -2
VPS17YOR132W ECO1P43605 281 aa2.57□□□□□ -2
VPS17YOR132W RSM10Q03201 203 aa2.57□□□□□ -2
VPS17YOR132W CUE4Q04201 117 aaPredicted RBP2.57□□□□□ -2
VPS17YOR132W RIM9Q04734 239 aa2.57□□□□□ -2
VPS17YOR132W HRD1Q08109 551 aa2.57□□□□□ -2
VPS17YOR132W AKR2Q12013 749 aa2.57□□□□□ -2
VPS17YOR132W TSC3Q3E790 80 aa2.57□□□□□ -2
VPS17YOR132W YOR020W-AQ3E824 90 aa2.57□□□□□ -2
VPS17YOR132W Q0144Q9ZZW2 109 aa2.57□□□□□ -2
VPS17YOR132W IRA1P18963 3092 aa2.56□□□□□ -2
VPS17YOR132W TEM1P38987 245 aa2.56□□□□□ -2
VPS17YOR132W GLC8P41818 229 aa2.56□□□□□ -2
VPS17YOR132W PAU5P43575 122 aa2.56□□□□□ -2
VPS17YOR132W XPT1P47165 209 aa2.56□□□□□ -2
VPS17YOR132W GEP7P53171 287 aa2.56□□□□□ -2
VPS17YOR132W YMR007WQ03675 126 aa2.56□□□□□ -2
VPS17YOR132W FIT3Q08907 204 aa2.56□□□□□ -2
VPS17YOR132W BOL1Q3E793 110 aa2.56□□□□□ -2
VPS17YOR132W YNR034W-AQ3E841 98 aa2.56□□□□□ -2
VPS17YOR132W YIL134C-AQ45U18 67 aa2.56□□□□□ -2
VPS17YOR132W YPR014CQ6B0W2 109 aa2.56□□□□□ -2
VPS17YOR132W YAL067W-AQ8TGK6 75 aa2.56□□□□□ -2
VPS17YOR132W ATG40Q99325 256 aa2.56□□□□□ -2
VPS17YOR132W Q0255P03881 472 aa2.55□□□□□ -2
VPS17YOR132W CBP6P07253 162 aaPredicted RBP2.55□□□□□ -2
VPS17YOR132W URA5P13298 226 aaKnown RBP2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 47.8 ms