RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C RAV2Q03956 351 aa3.69□□□□□ -1.82
EAR1YMR171C YDR114CQ04597 100 aa3.69□□□□□ -1.82
EAR1YMR171C FIT2Q08906 153 aa3.69□□□□□ -1.82
EAR1YMR171C IRA2P19158 3079 aa3.69□□□□□ -1.82
EAR1YMR171C HTB1P02293 131 aaKnown RBP3.68□□□□□ -1.82
EAR1YMR171C SOR1P35497 357 aaKnown RBP3.68□□□□□ -1.82
EAR1YMR171C YBR090CP38253 122 aa3.68□□□□□ -1.82
EAR1YMR171C YGP1P38616 354 aaKnown RBP3.68□□□□□ -1.82
EAR1YMR171C FYV4P38783 130 aaPredicted RBP3.68□□□□□ -1.82
EAR1YMR171C SDS23P53172 527 aa3.68□□□□□ -1.82
EAR1YMR171C SDH7Q04401 133 aa3.68□□□□□ -1.82
EAR1YMR171C SOR2Q07786 357 aa3.68□□□□□ -1.82
EAR1YMR171C HEM4P06174 275 aa3.68□□□□□ -1.82
EAR1YMR171C MRS1P07266 363 aa3.68□□□□□ -1.82
EAR1YMR171C PRS4P38063 326 aaPredicted RBP3.68□□□□□ -1.82
EAR1YMR171C SFT2P38166 215 aa3.68□□□□□ -1.82
EAR1YMR171C BDH1P39714 382 aa3.68□□□□□ -1.82
EAR1YMR171C YJL213WP40896 331 aa3.68□□□□□ -1.82
EAR1YMR171C PIR5P46999 287 aa3.68□□□□□ -1.82
EAR1YMR171C YJL118WP47022 219 aa3.68□□□□□ -1.82
EAR1YMR171C YDL186WP48568 277 aa3.68□□□□□ -1.82
EAR1YMR171C YML079WQ03629 201 aa3.68□□□□□ -1.82
EAR1YMR171C ARC18Q05933 178 aaKnown RBP3.68□□□□□ -1.82
EAR1YMR171C YLR050CQ12155 161 aaKnown RBP3.68□□□□□ -1.82
EAR1YMR171C RPL23AP0CX41 137 aaKnown RBP3.67□□□□□ -1.82
EAR1YMR171C RPL23BP0CX42 137 aaKnown RBP3.67□□□□□ -1.82
EAR1YMR171C SEC11P15367 167 aa3.67□□□□□ -1.82
EAR1YMR171C MIG1P27705 504 aa3.67□□□□□ -1.82
EAR1YMR171C MRP49P32388 137 aa3.67□□□□□ -1.82
EAR1YMR171C AIM29P36154 155 aa3.67□□□□□ -1.82
EAR1YMR171C CSH1P38287 376 aa3.67□□□□□ -1.82
EAR1YMR171C DOG2P38773 246 aa3.67□□□□□ -1.82
EAR1YMR171C RPF1P38805 295 aaKnown RBP3.67□□□□□ -1.82
EAR1YMR171C COX16P47081 118 aa3.67□□□□□ -1.82
EAR1YMR171C YGL260WP53056 76 aa3.67□□□□□ -1.82
EAR1YMR171C TOM7P53507 60 aa3.67□□□□□ -1.82
EAR1YMR171C GRH1Q04410 372 aaKnown RBP3.67□□□□□ -1.82
EAR1YMR171C FOL3Q12676 427 aaPredicted RBP3.67□□□□□ -1.82
EAR1YMR171C YMR230W-AQ3E7B5 62 aa3.67□□□□□ -1.82
EAR1YMR171C HTL1Q9URQ5 78 aa3.67□□□□□ -1.82
EAR1YMR171C HTB2P02294 131 aa3.66□□□□□ -1.82
EAR1YMR171C CYC3P06182 269 aa3.66□□□□□ -1.82
EAR1YMR171C MRPL31P14063 131 aaPredicted RBP3.66□□□□□ -1.82
EAR1YMR171C PRE1P22141 198 aaKnown RBP3.66□□□□□ -1.82
EAR1YMR171C LDB16P25587 256 aa3.66□□□□□ -1.82
EAR1YMR171C AGA1P32323 725 aa3.66□□□□□ -1.82
EAR1YMR171C RUB1Q03919 77 aa3.66□□□□□ -1.82
EAR1YMR171C UPS3Q04006 179 aa3.66□□□□□ -1.82
EAR1YMR171C FSF1Q12029 327 aaKnown RBP3.66□□□□□ -1.82
EAR1YMR171C YLR363W-AQ3E747 85 aa3.66□□□□□ -1.82
EAR1YMR171C LSM2P38203 95 aaKnown RBP3.65□□□□□ -1.82
EAR1YMR171C LST8P41318 303 aa3.65□□□□□ -1.82
EAR1YMR171C YFR045WP43617 309 aa3.65□□□□□ -1.82
EAR1YMR171C YGR018CP53211 109 aa3.65□□□□□ -1.82
EAR1YMR171C HST4P53688 370 aa3.65□□□□□ -1.82
EAR1YMR171C POP3P53833 195 aaPredicted RBP3.65□□□□□ -1.82
EAR1YMR171C GTO3Q04806 366 aa3.65□□□□□ -1.82
EAR1YMR171C DPP1Q05521 289 aa3.65□□□□□ -1.82
EAR1YMR171C MSC3Q05812 728 aa3.65□□□□□ -1.82
EAR1YMR171C PPT2Q12036 173 aa3.65□□□□□ -1.82
EAR1YMR171C DAD1Q12248 94 aa3.65□□□□□ -1.82
EAR1YMR171C RPL39P04650 51 aa3.65□□□□□ -1.83
EAR1YMR171C YPR170W-BP0C5R9 85 aa3.65□□□□□ -1.83
EAR1YMR171C ANB1P19211 157 aa3.65□□□□□ -1.83
EAR1YMR171C MRPL20P22354 195 aaPredicted RBP3.65□□□□□ -1.83
EAR1YMR171C FZF1P32805 299 aa3.65□□□□□ -1.83
EAR1YMR171C YKR070WP36151 352 aaKnown RBP3.65□□□□□ -1.83
EAR1YMR171C YNL200CP40165 246 aaKnown RBP3.65□□□□□ -1.83
EAR1YMR171C VHS2P40463 436 aa3.65□□□□□ -1.83
EAR1YMR171C YPI1P43587 155 aa3.65□□□□□ -1.83
EAR1YMR171C BRP1P53194 125 aa3.65□□□□□ -1.83
EAR1YMR171C SCS22Q6Q595 175 aa3.65□□□□□ -1.83
EAR1YMR171C SAL1D6W196 494 aa3.64□□□□□ -1.83
EAR1YMR171C ADH2P00331 348 aaKnown RBP3.64□□□□□ -1.83
EAR1YMR171C RPL12AP0CX53 165 aaKnown RBP3.64□□□□□ -1.83
EAR1YMR171C RPL12BP0CX54 165 aa3.64□□□□□ -1.83
EAR1YMR171C RRT1P38192 103 aa3.64□□□□□ -1.83
EAR1YMR171C YBR220CP38318 560 aa3.64□□□□□ -1.83
EAR1YMR171C YER188WP40103 239 aa3.64□□□□□ -1.83
EAR1YMR171C HUA1P40325 198 aa3.64□□□□□ -1.83
EAR1YMR171C DAD4P69851 72 aa3.64□□□□□ -1.83
EAR1YMR171C TIM18Q08749 192 aa3.64□□□□□ -1.83
EAR1YMR171C ATO3Q12359 275 aa3.64□□□□□ -1.83
EAR1YMR171C DDI2P0CH63 225 aa3.63□□□□□ -1.83
EAR1YMR171C DDI3P0CH64 225 aa3.63□□□□□ -1.83
EAR1YMR171C TIR2P33890 251 aa3.63□□□□□ -1.83
EAR1YMR171C KRE9P39005 276 aa3.63□□□□□ -1.83
EAR1YMR171C CAB4P53332 305 aa3.63□□□□□ -1.83
EAR1YMR171C VPS71Q03433 280 aa3.63□□□□□ -1.83
EAR1YMR171C API2Q04413 109 aa3.63□□□□□ -1.83
EAR1YMR171C GAT3Q07928 141 aa3.63□□□□□ -1.83
EAR1YMR171C YMR105W-AQ8TGS8 64 aa3.63□□□□□ -1.83
EAR1YMR171C GCN1P33892 2672 aaKnown RBP3.62□□□□□ -1.83
EAR1YMR171C PAI3P01094 68 aa3.62□□□□□ -1.83
EAR1YMR171C CPR1P14832 162 aaKnown RBP3.62□□□□□ -1.83
EAR1YMR171C YPS1P32329 569 aa3.62□□□□□ -1.83
EAR1YMR171C APS1P35181 156 aa3.62□□□□□ -1.83
EAR1YMR171C PRY2P36110 329 aa3.62□□□□□ -1.83
EAR1YMR171C MST28P39552 234 aa3.62□□□□□ -1.83
EAR1YMR171C YNL046WP53956 172 aa3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 48.8 ms