RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeastyeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT1YJR001W PEX2P32800 271 aa3.61□□□□□ -1.83
AVT1YJR001W MID2P36027 376 aa3.61□□□□□ -1.83
AVT1YJR001W COX14P39103 70 aa3.61□□□□□ -1.83
AVT1YJR001W PHS1P40857 217 aa3.61□□□□□ -1.83
AVT1YJR001W YLR112WQ12130 139 aa3.61□□□□□ -1.83
AVT1YJR001W TAD3Q9URQ3 322 aa3.61□□□□□ -1.83
AVT1YJR001W HTL1Q9URQ5 78 aa3.61□□□□□ -1.83
AVT1YJR001W YMR316C-AI2HB70 103 aa3.6□□□□□ -1.83
AVT1YJR001W Q0255P03881 472 aa3.6□□□□□ -1.83
AVT1YJR001W YCR050CP25630 102 aa3.6□□□□□ -1.83
AVT1YJR001W RPA12P32529 125 aaKnown RBP3.6□□□□□ -1.83
AVT1YJR001W YRA2P36036 203 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
AVT1YJR001W VPS25P47142 202 aa3.6□□□□□ -1.83
AVT1YJR001W SDS23P53172 527 aa3.6□□□□□ -1.83
AVT1YJR001W YGR050CP53231 118 aa3.6□□□□□ -1.83
AVT1YJR001W TDA7P53882 636 aaPredicted RBP3.6□□□□□ -1.83
AVT1YJR001W MZM1Q03429 123 aaPredicted RBP3.6□□□□□ -1.83
AVT1YJR001W YDL157CQ12082 118 aa3.6□□□□□ -1.83
AVT1YJR001W PAU19P0CE85 124 aa3.6□□□□□ -1.83
AVT1YJR001W PAU21P0CE86 164 aa3.6□□□□□ -1.83
AVT1YJR001W PAU22P0CE87 164 aa3.6□□□□□ -1.83
AVT1YJR001W YCR025CP25352 136 aa3.6□□□□□ -1.83
AVT1YJR001W PAU3P25610 124 aa3.6□□□□□ -1.83
AVT1YJR001W AHT1P29589 182 aa3.6□□□□□ -1.83
AVT1YJR001W EMC5P40540 141 aa3.6□□□□□ -1.83
AVT1YJR001W DSK2P48510 373 aa3.6□□□□□ -1.83
AVT1YJR001W KNH1P50112 268 aa3.6□□□□□ -1.83
AVT1YJR001W YLR281CQ05863 155 aa3.6□□□□□ -1.83
AVT1YJR001W ANT1Q06497 328 aa3.6□□□□□ -1.83
AVT1YJR001W POC4Q12245 148 aaPredicted RBP3.6□□□□□ -1.83
AVT1YJR001W UBC4P15731 148 aa3.59□□□□□ -1.83
AVT1YJR001W CSE2P33308 149 aa3.59□□□□□ -1.83
AVT1YJR001W SMP1P38128 452 aa3.59□□□□□ -1.83
AVT1YJR001W YHL018WP38744 120 aaPredicted RBP3.59□□□□□ -1.83
AVT1YJR001W GCV3P39726 170 aaPredicted RBP3.59□□□□□ -1.83
AVT1YJR001W IRC22P40006 225 aa3.59□□□□□ -1.83
AVT1YJR001W YIL054WP40524 105 aa3.59□□□□□ -1.83
AVT1YJR001W EST3Q03096 181 aa3.59□□□□□ -1.83
AVT1YJR001W ADD37Q03233 198 aa3.59□□□□□ -1.83
AVT1YJR001W GPI19Q04082 140 aa3.59□□□□□ -1.83
AVT1YJR001W DFM1Q12743 341 aaKnown RBP3.59□□□□□ -1.83
AVT1YJR001W SLH1P53327 1967 aaKnown RBP3.59□□□□□ -1.84
AVT1YJR001W YCR099CP25657 155 aa3.58□□□□□ -1.84
AVT1YJR001W NRG2P38082 220 aa3.58□□□□□ -1.84
AVT1YJR001W TVP23P38962 199 aa3.58□□□□□ -1.84
AVT1YJR001W GGC1P38988 300 aa3.58□□□□□ -1.84
AVT1YJR001W YJL218WP40892 196 aaKnown RBP3.58□□□□□ -1.84
AVT1YJR001W YGL088WP53151 121 aa3.58□□□□□ -1.84
AVT1YJR001W MPC1P53157 130 aaKnown RBP3.58□□□□□ -1.84
AVT1YJR001W SMD1Q02260 146 aaPredicted RBP3.58□□□□□ -1.84
AVT1YJR001W PIR3Q03180 325 aa3.58□□□□□ -1.84
AVT1YJR001W UBR2Q07963 1872 aa3.58□□□□□ -1.84
AVT1YJR001W YOL162WP0CF19 215 aa3.58□□□□□ -1.84
AVT1YJR001W YKR073CP36153 106 aa3.58□□□□□ -1.84
AVT1YJR001W SVP26P38869 228 aa3.58□□□□□ -1.84
AVT1YJR001W YGL193CP53097 103 aa3.58□□□□□ -1.84
AVT1YJR001W YIL102C-AQ2V2P5 75 aa3.58□□□□□ -1.84
AVT1YJR001W YDR119W-AQ2V2P9 66 aa3.58□□□□□ -1.84
AVT1YJR001W ATG40Q99325 256 aa3.58□□□□□ -1.84
AVT1YJR001W IRC25Q07951 179 aa3.57□□□□□ -1.84
AVT1YJR001W YLR363W-AQ3E747 85 aa3.57□□□□□ -1.84
AVT1YJR001W RPL15AP05748 204 aaKnown RBP3.56□□□□□ -1.84
AVT1YJR001W LDB16P25587 256 aa3.56□□□□□ -1.84
AVT1YJR001W MSB2P32334 1306 aa3.56□□□□□ -1.84
AVT1YJR001W PUB1P32588 453 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84not detected
AVT1YJR001W GPI18P38211 433 aa3.56□□□□□ -1.84
AVT1YJR001W TIM17P39515 158 aa3.56□□□□□ -1.84
AVT1YJR001W NSA2P40078 261 aaKnown RBP3.56□□□□□ -1.84
AVT1YJR001W SUN4P53616 420 aa3.56□□□□□ -1.84
AVT1YJR001W RPL15BP54780 204 aaPredicted RBP3.56□□□□□ -1.84
AVT1YJR001W YDL211CQ12121 372 aa3.56□□□□□ -1.84
AVT1YJR001W TOM6P33448 61 aa3.56□□□□□ -1.84
AVT1YJR001W RPB7P34087 171 aa3.56□□□□□ -1.84
AVT1YJR001W ECM34P38728 170 aa3.56□□□□□ -1.84
AVT1YJR001W EDC2P40023 145 aaPredicted RBP3.56□□□□□ -1.84
AVT1YJR001W YPL278CQ08990 100 aa3.56□□□□□ -1.84
AVT1YJR001W DAD1Q12248 94 aa3.56□□□□□ -1.84
AVT1YJR001W HSP12P22943 109 aaKnown RBP3.55□□□□□ -1.84
AVT1YJR001W MRPS9P38120 278 aa3.55□□□□□ -1.84
AVT1YJR001W ASP1P38986 381 aaPredicted RBP3.55□□□□□ -1.84
AVT1YJR001W YDR524C-BQ3E6R4 66 aa3.55□□□□□ -1.84
AVT1YJR001W YBL008W-AQ3E821 79 aa3.55□□□□□ -1.84
AVT1YJR001W PAU16P35994 123 aa3.54□□□□□ -1.84
AVT1YJR001W PIR5P46999 287 aa3.54□□□□□ -1.84
AVT1YJR001W YOR376W-AQ3E805 51 aa3.54□□□□□ -1.84
AVT1YJR001W RPL40AP0CH08 128 aaKnown RBP3.54□□□□□ -1.84
AVT1YJR001W RPL40BP0CH09 128 aaKnown RBP3.54□□□□□ -1.84
AVT1YJR001W MDH2P22133 377 aa3.54□□□□□ -1.84
AVT1YJR001W YBR292CP38357 123 aa3.54□□□□□ -1.84
AVT1YJR001W YND1P40009 630 aa3.54□□□□□ -1.84
AVT1YJR001W PEP8P40335 379 aa3.54□□□□□ -1.84
AVT1YJR001W YFL012WP43580 148 aa3.54□□□□□ -1.84
AVT1YJR001W RSM19P53733 91 aaPredicted RBP3.54□□□□□ -1.84
AVT1YJR001W YML079WQ03629 201 aa3.54□□□□□ -1.84
AVT1YJR001W FSH2Q05015 223 aa3.54□□□□□ -1.84
AVT1YJR001W TDA8Q6B2U8 126 aa3.54□□□□□ -1.84
AVT1YJR001W MIC10Q96VH5 97 aa3.54□□□□□ -1.84
AVT1YJR001W IMP1P28627 190 aa3.53□□□□□ -1.84
AVT1YJR001W PAU5P43575 122 aa3.53□□□□□ -1.84
AVT1YJR001W POP3P53833 195 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 70.2 ms