RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C HSP12P22943 109 aaKnown RBP2.35□□□□□ -2.03
NMD2YHR077C ACP1P32463 125 aa2.35□□□□□ -2.03
NMD2YHR077C YPT10P38146 199 aa2.35□□□□□ -2.03
NMD2YHR077C AME1P38313 324 aa2.35□□□□□ -2.03
NMD2YHR077C YER121WP40076 114 aa2.35□□□□□ -2.03
NMD2YHR077C YER188WP40103 239 aa2.35□□□□□ -2.03
NMD2YHR077C YDL183CP48569 320 aa2.35□□□□□ -2.03
NMD2YHR077C YOL160WQ08321 113 aa2.35□□□□□ -2.03
NMD2YHR077C RPL11BQ3E757 174 aaPredicted RBP2.35□□□□□ -2.03
NMD2YHR077C ZRT1P32804 376 aa2.35□□□□□ -2.03
NMD2YHR077C YKL075CP36083 450 aa2.35□□□□□ -2.03
NMD2YHR077C MBB1P39534 108 aa2.35□□□□□ -2.03
NMD2YHR077C YNL092WP53934 400 aa2.35□□□□□ -2.03
NMD2YHR077C ATP5P09457 212 aa2.34□□□□□ -2.03
NMD2YHR077C RPL23AP0CX41 137 aaKnown RBP2.34□□□□□ -2.03
NMD2YHR077C RPL23BP0CX42 137 aaKnown RBP2.34□□□□□ -2.03
NMD2YHR077C MRPL38P35996 138 aaPredicted RBP2.34□□□□□ -2.03
NMD2YHR077C YGR017WP53210 297 aa2.34□□□□□ -2.03
NMD2YHR077C FYV7Q12247 151 aa2.34□□□□□ -2.03
NMD2YHR077C YBR182C-AQ8TGU6 64 aa2.34□□□□□ -2.03
NMD2YHR077C HTB2P02294 131 aa2.34□□□□□ -2.03
NMD2YHR077C MDM10P18409 493 aa2.34□□□□□ -2.03
NMD2YHR077C MIC12P38341 106 aa2.34□□□□□ -2.03
NMD2YHR077C PRE5P40302 234 aaKnown RBP2.34□□□□□ -2.03
NMD2YHR077C TDA4P47153 279 aa2.34□□□□□ -2.03
NMD2YHR077C YIL014C-AQ02598 104 aa2.34□□□□□ -2.03
NMD2YHR077C JID1Q12350 301 aa2.34□□□□□ -2.03
NMD2YHR077C DFM1Q12743 341 aaKnown RBP2.34□□□□□ -2.03
NMD2YHR077C YDL085C-AQ3E7B7 68 aaKnown RBP2.34□□□□□ -2.03
NMD2YHR077C INO2P26798 304 aa2.34□□□□□ -2.04
NMD2YHR077C MRPL11P36521 249 aaPredicted RBP2.34□□□□□ -2.04
NMD2YHR077C YGL230CP53074 147 aa2.34□□□□□ -2.04
NMD2YHR077C SDS23P53172 527 aa2.34□□□□□ -2.04
NMD2YHR077C POM33Q12164 279 aa2.34□□□□□ -2.04
NMD2YHR077C UTR5P32630 166 aa2.33□□□□□ -2.04
NMD2YHR077C RPB11P38902 120 aa2.33□□□□□ -2.04
NMD2YHR077C YPI1P43587 155 aa2.33□□□□□ -2.04
NMD2YHR077C PKR1Q03880 122 aaKnown RBP2.33□□□□□ -2.04
NMD2YHR077C YLR342W-AQ3E810 57 aa2.33□□□□□ -2.04
NMD2YHR077C ERS1P17261 260 aa2.33□□□□□ -2.04
NMD2YHR077C TIR2P33890 251 aa2.33□□□□□ -2.04
NMD2YHR077C RRT1P38192 103 aa2.33□□□□□ -2.04
NMD2YHR077C DAD4P69851 72 aa2.33□□□□□ -2.04
NMD2YHR077C MGR2Q02889 113 aa2.33□□□□□ -2.04
NMD2YHR077C PRE1P22141 198 aaKnown RBP2.32□□□□□ -2.04
NMD2YHR077C TCA17P32613 152 aa2.32□□□□□ -2.04
NMD2YHR077C SDH7Q04401 133 aa2.32□□□□□ -2.04
NMD2YHR077C YLR112WQ12130 139 aa2.32□□□□□ -2.04
NMD2YHR077C YPR014CQ6B0W2 109 aa2.32□□□□□ -2.04
NMD2YHR077C COX2P00410 251 aa2.32□□□□□ -2.04
NMD2YHR077C YDL022C-AP0C5L6 82 aa2.32□□□□□ -2.04
NMD2YHR077C FYV4P38783 130 aaPredicted RBP2.32□□□□□ -2.04
NMD2YHR077C YEL067CP39978 195 aa2.32□□□□□ -2.04
NMD2YHR077C YDR042CQ03205 200 aa2.32□□□□□ -2.04
NMD2YHR077C TRI1Q05024 226 aa2.32□□□□□ -2.04
NMD2YHR077C RPL31AP0C2H8 113 aaKnown RBP2.32□□□□□ -2.04
NMD2YHR077C RPL31BP0C2H9 113 aaKnown RBP2.32□□□□□ -2.04
NMD2YHR077C RPL12AP0CX53 165 aaKnown RBP2.32□□□□□ -2.04
NMD2YHR077C RPL12BP0CX54 165 aa2.32□□□□□ -2.04
NMD2YHR077C POP3P53833 195 aaPredicted RBP2.32□□□□□ -2.04
NMD2YHR077C IRC25Q07951 179 aa2.32□□□□□ -2.04
NMD2YHR077C PAU23Q07987 124 aa2.32□□□□□ -2.04
NMD2YHR077C PAU17Q12370 124 aa2.32□□□□□ -2.04
NMD2YHR077C URA2P07259 2214 aaKnown RBP2.32□□□□□ -2.04
NMD2YHR077C YCR023CP25351 611 aa2.31□□□□□ -2.04
NMD2YHR077C PRS4P38063 326 aaPredicted RBP2.31□□□□□ -2.04
NMD2YHR077C FIP1P45976 327 aa2.31□□□□□ -2.04
NMD2YHR077C YMR181CQ03231 154 aa2.31□□□□□ -2.04
NMD2YHR077C ATG39Q06159 398 aa2.31□□□□□ -2.04
NMD2YHR077C YPL162CQ12042 273 aa2.31□□□□□ -2.04
NMD2YHR077C YOL085CQ99345 113 aa2.31□□□□□ -2.04
NMD2YHR077C PRP8P33334 2413 aaKnown RBP2.31□□□□□ -2.04
NMD2YHR077C YER145C-AA0A023PYF4 145 aa2.31□□□□□ -2.04
NMD2YHR077C YPR170W-BP0C5R9 85 aa2.31□□□□□ -2.04
NMD2YHR077C YNL194CP40169 301 aa2.31□□□□□ -2.04
NMD2YHR077C HAC1P41546 238 aa2.31□□□□□ -2.04
NMD2YHR077C YIP1P53039 248 aa2.31□□□□□ -2.04
NMD2YHR077C SCS22Q6Q595 175 aa2.31□□□□□ -2.04
NMD2YHR077C RPL43AP0CX25 92 aaKnown RBP2.3□□□□□ -2.04
NMD2YHR077C RPL43BP0CX26 92 aa2.3□□□□□ -2.04
NMD2YHR077C YFR035CP43608 114 aa2.3□□□□□ -2.04
NMD2YHR077C YGL118CP53132 145 aa2.3□□□□□ -2.04
NMD2YHR077C VPS71Q03433 280 aa2.3□□□□□ -2.04
NMD2YHR077C GPI19Q04082 140 aa2.3□□□□□ -2.04
NMD2YHR077C FCF1Q05498 189 aaPredicted RBP2.3□□□□□ -2.04
NMD2YHR077C MEC1P38111 2368 aa2.3□□□□□ -2.04
NMD2YHR077C AQY1P0CD91 305 aa2.3□□□□□ -2.04
NMD2YHR077C YFL068WP0CX99 160 aa2.3□□□□□ -2.04
NMD2YHR077C YLL066W-AP0CY00 160 aa2.3□□□□□ -2.04
NMD2YHR077C YLL067W-AP0CY01 160 aa2.3□□□□□ -2.04
NMD2YHR077C AGA1P32323 725 aa2.3□□□□□ -2.04
NMD2YHR077C PAU7P39545 55 aa2.3□□□□□ -2.04
NMD2YHR077C POR2P40478 281 aa2.3□□□□□ -2.04
NMD2YHR077C THG1P53215 237 aaKnown RBP2.3□□□□□ -2.04
NMD2YHR077C BET5Q03630 159 aa2.3□□□□□ -2.04
NMD2YHR077C DPP1Q05521 289 aa2.3□□□□□ -2.04
NMD2YHR077C GEP3Q08622 556 aa2.3□□□□□ -2.04
NMD2YHR077C CCW12Q12127 133 aa2.3□□□□□ -2.04
NMD2YHR077C UTP23Q12339 254 aaKnown RBP2.3□□□□□ -2.04
NMD2YHR077C TAR1Q8TGM6 124 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms