RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	SKI3	P17883	1432 aa	Known RBP	2.72	□□□□□ -1.97
VMA22	YHR060W	HSP10	P38910	106 aa		2.72	□□□□□ -1.97
VMA22	YHR060W	TSC11	P40061	1430 aa		2.72	□□□□□ -1.97
VMA22	YHR060W	HYR1	P40581	163 aa	Known RBP	2.72	□□□□□ -1.97
VMA22	YHR060W	ERV14	P53173	138 aa		2.72	□□□□□ -1.97
VMA22	YHR060W	ZEO1	Q08245	113 aa		2.72	□□□□□ -1.97
VMA22	YHR060W	SEC59	P20048	519 aa		2.71	□□□□□ -1.98
VMA22	YHR060W	YKR045C	P36138	183 aa		2.71	□□□□□ -1.98
VMA22	YHR060W	YAR029W	P39549	74 aa		2.71	□□□□□ -1.98
VMA22	YHR060W	GPI11	Q06636	219 aa		2.71	□□□□□ -1.98
VMA22	YHR060W	PRE1	P22141	198 aa	Known RBP	2.7	□□□□□ -1.98
VMA22	YHR060W	YCR101C	P25607	182 aa		2.7	□□□□□ -1.98
VMA22	YHR060W	PAM16	P42949	149 aa		2.7	□□□□□ -1.98
VMA22	YHR060W	YMR252C	Q04814	134 aa		2.7	□□□□□ -1.98
VMA22	YHR060W	DUR1,2	P32528	1835 aa	Known RBP	2.7	□□□□□ -1.98
VMA22	YHR060W	PAU21	P0CE86	164 aa		2.69	□□□□□ -1.98
VMA22	YHR060W	PAU22	P0CE87	164 aa		2.69	□□□□□ -1.98
VMA22	YHR060W	HAP3	P13434	144 aa		2.69	□□□□□ -1.98
VMA22	YHR060W	YKL044W	P36092	106 aa		2.69	□□□□□ -1.98
VMA22	YHR060W	TDA2	P40045	126 aa		2.69	□□□□□ -1.98
VMA22	YHR060W	YGR164W	P53291	111 aa		2.69	□□□□□ -1.98
VMA22	YHR060W	GPI19	Q04082	140 aa		2.69	□□□□□ -1.98
VMA22	YHR060W	GTT2	Q12390	233 aa		2.69	□□□□□ -1.98
VMA22	YHR060W	VAR1	P02381	398 aa		2.68	□□□□□ -1.98
VMA22	YHR060W	YBR219C	P38317	127 aa		2.68	□□□□□ -1.98
VMA22	YHR060W	SNF11	P38956	169 aa		2.68	□□□□□ -1.98
VMA22	YHR060W	GNA1	P43577	159 aa	Predicted RBP	2.68	□□□□□ -1.98
VMA22	YHR060W	YAE1	P47118	141 aa	Predicted RBP	2.68	□□□□□ -1.98
VMA22	YHR060W	YGL149W	P53116	101 aa		2.68	□□□□□ -1.98
VMA22	YHR060W	FUN14	P18411	198 aa		2.67	□□□□□ -1.98
VMA22	YHR060W	HYP2	P23301	157 aa	Known RBP	2.67	□□□□□ -1.98
VMA22	YHR060W	IPT1	P38954	527 aa		2.67	□□□□□ -1.98
VMA22	YHR060W	RPL13B	P40212	199 aa	Known RBP	2.67	□□□□□ -1.98
VMA22	YHR060W	DCV1	P43595	202 aa		2.67	□□□□□ -1.98
VMA22	YHR060W	BAT2	P47176	376 aa	Known RBP	2.67	□□□□□ -1.98
VMA22	YHR060W	RPL13A	Q12690	199 aa	Predicted RBP	2.67	□□□□□ -1.98
VMA22	YHR060W	YHR086W-A	Q3E746	53 aa		2.67	□□□□□ -1.98
VMA22	YHR060W	HSP150	P32478	413 aa		2.66	□□□□□ -1.98
VMA22	YHR060W	YBR090C	P38253	122 aa		2.66	□□□□□ -1.98
VMA22	YHR060W	BRP1	P53194	125 aa		2.66	□□□□□ -1.98
VMA22	YHR060W	YPL067C	Q02754	198 aa		2.66	□□□□□ -1.98
VMA22	YHR060W	YLR162W	Q06235	118 aa		2.66	□□□□□ -1.98
VMA22	YHR060W	OCA6	Q12454	224 aa		2.66	□□□□□ -1.98
VMA22	YHR060W	YOR376W-A	Q3E805	51 aa		2.66	□□□□□ -1.98
VMA22	YHR060W	QCR8	P08525	94 aa		2.65	□□□□□ -1.99
VMA22	YHR060W	YFR035C	P43608	114 aa		2.65	□□□□□ -1.99
VMA22	YHR060W	CMC4	Q3E7A9	73 aa		2.65	□□□□□ -1.99
VMA22	YHR060W	YNL146C-A	Q3E7Z1	64 aa		2.65	□□□□□ -1.99
VMA22	YHR060W	MHF1	Q3E835	90 aa		2.65	□□□□□ -1.99
VMA22	YHR060W	BUD23	P25627	275 aa	Predicted RBP	2.64	□□□□□ -1.99
VMA22	YHR060W	SRL3	P36167	246 aa		2.64	□□□□□ -1.99
VMA22	YHR060W	AVO2	Q04749	426 aa		2.64	□□□□□ -1.99
VMA22	YHR060W	MRPL11	P36521	249 aa	Predicted RBP	2.63	□□□□□ -1.99
VMA22	YHR060W	SWC7	Q06707	132 aa		2.63	□□□□□ -1.99
VMA22	YHR060W	VAM10	Q08474	114 aa		2.63	□□□□□ -1.99
VMA22	YHR060W	YLR422W	Q06409	1932 aa		2.63	□□□□□ -1.99
VMA22	YHR060W	YFL051C	P43552	160 aa		2.62	□□□□□ -1.99
VMA22	YHR060W	TAR1	Q8TGM6	124 aa		2.62	□□□□□ -1.99
VMA22	YHR060W	MED11	Q99278	115 aa		2.62	□□□□□ -1.99
VMA22	YHR060W	RPL36B	O14455	100 aa	Known RBP	2.61	□□□□□ -1.99
VMA22	YHR060W	RPL36A	P05745	100 aa	Predicted RBP	2.61	□□□□□ -1.99
VMA22	YHR060W	UBC5	P15732	148 aa		2.6	□□□□□ -1.99
VMA22	YHR060W	YGL010W	P25338	174 aa		2.6	□□□□□ -1.99
VMA22	YHR060W	YEA6	P39953	335 aa		2.6	□□□□□ -1.99
VMA22	YHR060W	YMR090W	Q04304	227 aa	Known RBP	2.6	□□□□□ -1.99
VMA22	YHR060W	YLR365W	Q7LIF2	110 aa		2.6	□□□□□ -1.99
VMA22	YHR060W	KRE5	P22023	1365 aa		2.6	□□□□□ -1.99
VMA22	YHR060W	BUD4	P47136	1447 aa		2.59	□□□□□ -1.99
VMA22	YHR060W	TRM732	Q03496	1420 aa		2.59	□□□□□ -1.99
VMA22	YHR060W	GTT1	P40582	234 aa		2.59	□□□□□ -1.99
VMA22	YHR060W	IGO1	P53897	168 aa		2.59	□□□□□ -1.99
VMA22	YHR060W	YMR103C	Q04436	120 aa		2.59	□□□□□ -1.99
VMA22	YHR060W	DAD1	Q12248	94 aa		2.59	□□□□□ -1.99
VMA22	YHR060W	YCL001W-B	Q96VH2	84 aa		2.59	□□□□□ -1.99
VMA22	YHR060W	HAP2	P06774	265 aa		2.58	□□□□□ -2
VMA22	YHR060W	PFY1	P07274	126 aa		2.58	□□□□□ -2
VMA22	YHR060W	EMP24	P32803	203 aa	Known RBP	2.58	□□□□□ -2
VMA22	YHR060W	YBR242W	P38331	238 aa		2.58	□□□□□ -2
VMA22	YHR060W	AIM18	P38884	321 aa		2.58	□□□□□ -2
VMA22	YHR060W	VMA21	P41806	77 aa		2.58	□□□□□ -2
VMA22	YHR060W	YPL261C	Q08976	102 aa		2.58	□□□□□ -2
VMA22	YHR060W	RTC6	O14464	93 aa		2.57	□□□□□ -2
VMA22	YHR060W	YEL008W	P40001	126 aa		2.57	□□□□□ -2
VMA22	YHR060W	SED1	Q01589	338 aa		2.57	□□□□□ -2
VMA22	YHR060W	YLR296W	Q05898	108 aa		2.57	□□□□□ -2
VMA22	YHR060W	HPA2	Q06592	156 aa		2.57	□□□□□ -2
VMA22	YHR060W	COA3	Q3E7B2	85 aa		2.57	□□□□□ -2
VMA22	YHR060W	YHR213W	P0CI67	198 aa		2.56	□□□□□ -2
VMA22	YHR060W	YBR027C	P38220	110 aa		2.56	□□□□□ -2
VMA22	YHR060W	YER187W	P40102	141 aa		2.56	□□□□□ -2
VMA22	YHR060W	HUR1	P45820	110 aa		2.56	□□□□□ -2
VMA22	YHR060W	OST5	Q92316	86 aa		2.56	□□□□□ -2
VMA22	YHR060W	GEA2	P39993	1459 aa	Known RBP	2.56	□□□□□ -2
VMA22	YHR060W	RPL33A	P05744	107 aa	Known RBP	2.55	□□□□□ -2
VMA22	YHR060W	GEA1	P47102	1408 aa	Predicted RBP	2.55	□□□□□ -2
VMA22	YHR060W	FIT1	Q04433	528 aa		2.55	□□□□□ -2
VMA22	YHR060W	YOS1	Q3E834	85 aa		2.55	□□□□□ -2
VMA22	YHR060W	UBR1	P19812	1950 aa		2.54	□□□□□ -2
VMA22	YHR060W	PDR11	P40550	1411 aa		2.54	□□□□□ -2
VMA22	YHR060W	YCL042W	P25572	119 aa		2.54	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms