RNA–Protein interactions for RNA: YHR026W

VMA16, Transcript of Subunit c'' of the vacuolar ATPase, yeastyeast

Gene VMA16, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA16YHR026W NDE2Q07500 545 aa4.34□□□□□ -1.71
VMA16YHR026W FIT2Q08906 153 aa4.34□□□□□ -1.71
VMA16YHR026W DDI2P0CH63 225 aa4.33□□□□□ -1.72
VMA16YHR026W DDI3P0CH64 225 aa4.33□□□□□ -1.72
VMA16YHR026W PHO85P17157 305 aa4.33□□□□□ -1.72
VMA16YHR026W MRPL44P19956 98 aa4.33□□□□□ -1.72
VMA16YHR026W YKR045CP36138 183 aa4.33□□□□□ -1.72
VMA16YHR026W MRPL11P36521 249 aaPredicted RBP4.33□□□□□ -1.72
VMA16YHR026W YMR166CQ03829 368 aa4.33□□□□□ -1.72
VMA16YHR026W GIM5Q04493 163 aa4.33□□□□□ -1.72
VMA16YHR026W YIL134C-AQ45U18 67 aa4.33□□□□□ -1.72
VMA16YHR026W YCL001W-BQ96VH2 84 aa4.33□□□□□ -1.72
VMA16YHR026W HTB2P02294 131 aa4.32□□□□□ -1.72
VMA16YHR026W SCM4P32564 187 aa4.32□□□□□ -1.72
VMA16YHR026W MIX23P38162 196 aa4.32□□□□□ -1.72
VMA16YHR026W RAV2Q03956 351 aa4.32□□□□□ -1.72
VMA16YHR026W SEN15Q04675 128 aa4.32□□□□□ -1.72
VMA16YHR026W JID1Q12350 301 aa4.32□□□□□ -1.72
VMA16YHR026W ATO3Q12359 275 aa4.32□□□□□ -1.72
VMA16YHR026W YLR302CO13544 120 aa4.31□□□□□ -1.72
VMA16YHR026W FUN14P18411 198 aa4.31□□□□□ -1.72
VMA16YHR026W MRPL20P22354 195 aaPredicted RBP4.31□□□□□ -1.72
VMA16YHR026W LSM2P38203 95 aaKnown RBP4.31□□□□□ -1.72
VMA16YHR026W AME1P38313 324 aa4.31□□□□□ -1.72
VMA16YHR026W YJL213WP40896 331 aa4.31□□□□□ -1.72
VMA16YHR026W RPA43P46669 326 aa4.31□□□□□ -1.72
VMA16YHR026W AYT1Q12226 474 aa4.31□□□□□ -1.72
VMA16YHR026W FYV7Q12247 151 aa4.31□□□□□ -1.72
VMA16YHR026W CUP2P15315 225 aa4.3□□□□□ -1.72
VMA16YHR026W TIR2P33890 251 aa4.3□□□□□ -1.72
VMA16YHR026W PAU7P39545 55 aa4.3□□□□□ -1.72
VMA16YHR026W IMP2P46972 177 aa4.3□□□□□ -1.72
VMA16YHR026W YGL118CP53132 145 aa4.3□□□□□ -1.72
VMA16YHR026W TOM7P53507 60 aa4.3□□□□□ -1.72
VMA16YHR026W YNL234WP53857 426 aa4.3□□□□□ -1.72
VMA16YHR026W IZH1Q03419 316 aa4.3□□□□□ -1.72
VMA16YHR026W GEP3Q08622 556 aa4.3□□□□□ -1.72
VMA16YHR026W CRC1Q12289 327 aa4.3□□□□□ -1.72
VMA16YHR026W UTP23Q12339 254 aaKnown RBP4.3□□□□□ -1.72
VMA16YHR026W ERG27Q12452 347 aaKnown RBP4.3□□□□□ -1.72
VMA16YHR026W CYC3P06182 269 aa4.29□□□□□ -1.72
VMA16YHR026W YHR213WP0CI67 198 aa4.29□□□□□ -1.72
VMA16YHR026W MRPL38P35996 138 aaPredicted RBP4.29□□□□□ -1.72
VMA16YHR026W PAM17P36147 197 aa4.29□□□□□ -1.72
VMA16YHR026W FIP1P45976 327 aa4.29□□□□□ -1.72
VMA16YHR026W CNL1Q06333 122 aa4.29□□□□□ -1.72
VMA16YHR026W POM33Q12164 279 aa4.29□□□□□ -1.72
VMA16YHR026W YDL085C-AQ3E7B7 68 aaKnown RBP4.29□□□□□ -1.72
VMA16YHR026W YCR024C-BQ3E7Z8 88 aa4.29□□□□□ -1.72
VMA16YHR026W ATP5P09457 212 aa4.28□□□□□ -1.72
VMA16YHR026W RPL31BP0C2H9 113 aaKnown RBP4.28□□□□□ -1.72
VMA16YHR026W MRPL31P14063 131 aaPredicted RBP4.28□□□□□ -1.72
VMA16YHR026W PAU16P35994 123 aa4.28□□□□□ -1.72
VMA16YHR026W YBR090CP38253 122 aa4.28□□□□□ -1.72
VMA16YHR026W YFR045WP43617 309 aa4.28□□□□□ -1.72
VMA16YHR026W GLO1P50107 326 aa4.28□□□□□ -1.72
VMA16YHR026W SWT21P53873 357 aaPredicted RBP4.28□□□□□ -1.72
VMA16YHR026W UBC7Q02159 165 aa4.28□□□□□ -1.72
VMA16YHR026W DAD1Q12248 94 aa4.28□□□□□ -1.72
VMA16YHR026W VMA16P23968 213 aa4.27□□□□□ -1.73
VMA16YHR026W ZRT1P32804 376 aa4.27□□□□□ -1.73
VMA16YHR026W TEM1P38987 245 aa4.27□□□□□ -1.73
VMA16YHR026W MBB1P39534 108 aa4.27□□□□□ -1.73
VMA16YHR026W POR2P40478 281 aa4.27□□□□□ -1.73
VMA16YHR026W CDC40P40968 455 aaPredicted RBP4.27□□□□□ -1.73
VMA16YHR026W YJL027CP47063 138 aaPredicted RBP4.27□□□□□ -1.73
VMA16YHR026W TDA4P47153 279 aa4.27□□□□□ -1.73
VMA16YHR026W DAD4P69851 72 aa4.27□□□□□ -1.73
VMA16YHR026W UPS3Q04006 179 aa4.27□□□□□ -1.73
VMA16YHR026W SPG4Q04438 115 aa4.27□□□□□ -1.73
VMA16YHR026W TIM18Q08749 192 aa4.27□□□□□ -1.73
VMA16YHR026W FCY1Q12178 158 aa4.27□□□□□ -1.73
VMA16YHR026W SEC4P07560 215 aaKnown RBP4.26□□□□□ -1.73
VMA16YHR026W FZF1P32805 299 aa4.26□□□□□ -1.73
VMA16YHR026W YRA2P36036 203 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
VMA16YHR026W SEC72P39742 193 aaKnown RBP4.26□□□□□ -1.73
VMA16YHR026W YER134CP40081 178 aa4.26□□□□□ -1.73
VMA16YHR026W COX16P47081 118 aa4.26□□□□□ -1.73
VMA16YHR026W AIM24P47127 394 aa4.26□□□□□ -1.73
VMA16YHR026W YGR219WP53307 113 aa4.26□□□□□ -1.73
VMA16YHR026W PBP4Q07362 185 aaKnown RBP4.26□□□□□ -1.73
VMA16YHR026W CSM4Q08955 156 aa4.26□□□□□ -1.73
VMA16YHR026W YLR342W-AQ3E810 57 aa4.26□□□□□ -1.73
VMA16YHR026W RPL23AP0CX41 137 aaKnown RBP4.25□□□□□ -1.73
VMA16YHR026W RPL23BP0CX42 137 aaKnown RBP4.25□□□□□ -1.73
VMA16YHR026W YCR007CP25354 239 aa4.25□□□□□ -1.73
VMA16YHR026W YPS1P32329 569 aa4.25□□□□□ -1.73
VMA16YHR026W PRS4P38063 326 aaPredicted RBP4.25□□□□□ -1.73
VMA16YHR026W GLE2P40066 365 aa4.25□□□□□ -1.73
VMA16YHR026W PRE5P40302 234 aaKnown RBP4.25□□□□□ -1.73
VMA16YHR026W SDS23P53172 527 aa4.25□□□□□ -1.73
VMA16YHR026W SAE3P89114 91 aa4.25□□□□□ -1.73
VMA16YHR026W RPL12AP0CX53 165 aaKnown RBP4.24□□□□□ -1.73
VMA16YHR026W RPL12BP0CX54 165 aa4.24□□□□□ -1.73
VMA16YHR026W GSP1P32835 219 aaKnown RBP4.24□□□□□ -1.73
VMA16YHR026W GSP2P32836 220 aaKnown RBP4.24□□□□□ -1.73
VMA16YHR026W MIC12P38341 106 aa4.24□□□□□ -1.73
VMA16YHR026W HUA1P40325 198 aa4.24□□□□□ -1.73
VMA16YHR026W GTO3Q04806 366 aa4.24□□□□□ -1.73
VMA16YHR026W ARC18Q05933 178 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms